RNA–Protein interactions for RNA: ENST00000614775.4

SMIM20-205, Transcript of small integral membrane protein 20, humanhuman

TSL 5 BASIC

Gene SMIM20, Length 1,190 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM20-205ENST00000614775 ARHGEF12Q9NZN5 1544 aa31.04■■■□□ 2.56
SMIM20-205ENST00000614775 HECW1Q76N89 1606 aa31.04■■■□□ 2.56
SMIM20-205ENST00000614775 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP31.03■■■□□ 2.56
SMIM20-205ENST00000614775 DMRT2Q9Y5R5 561 aa31.03■■■□□ 2.56
SMIM20-205ENST00000614775 PLEKHD1A6NEE1 506 aa31.01■■■□□ 2.55
SMIM20-205ENST00000614775 CEBPAP49715 358 aaPredicted RBP30.96■■■□□ 2.55
SMIM20-205ENST00000614775 ATP10AO60312 1499 aa30.92■■■□□ 2.54
SMIM20-205ENST00000614775 C9orf84Q5VXU9 1444 aa30.9■■■□□ 2.54
SMIM20-205ENST00000614775 UHRF1BP1Q6BDS2 1440 aa30.9■■■□□ 2.54
SMIM20-205ENST00000614775 SCAPERQ9BY12 1400 aa30.9■■■□□ 2.54
SMIM20-205ENST00000614775 PTPRTO14522 1441 aa30.88■■■□□ 2.53
SMIM20-205ENST00000614775 LTBP4Q8N2S1 1624 aa30.84■■■□□ 2.53
SMIM20-205ENST00000614775 SETD1BQ9UPS6 1966 aaKnown RBP30.84■■■□□ 2.53
SMIM20-205ENST00000614775 PLCH2O75038 1416 aa30.81■■■□□ 2.52
SMIM20-205ENST00000614775 IQSEC2Q5JU85 1478 aa30.81■■■□□ 2.52
SMIM20-205ENST00000614775 RANGAP1P46060 587 aaPredicted RBP30.75■■■□□ 2.51
SMIM20-205ENST00000614775 CDK13Q14004 1512 aaKnown RBP30.72■■■□□ 2.51
SMIM20-205ENST00000614775 C3P01024 1663 aa30.71■■■□□ 2.51
SMIM20-205ENST00000614775 CSRNP3Q8WYN3 585 aa30.69■■■□□ 2.5
SMIM20-205ENST00000614775 EFCAB2Q5VUJ9 269 aa30.67■■■□□ 2.5
SMIM20-205ENST00000614775 ZNF518AQ6AHZ1 1483 aa30.67■■■□□ 2.5
SMIM20-205ENST00000614775 MYO5CQ9NQX4 1742 aa30.66■■■□□ 2.5
SMIM20-205ENST00000614775 KDM5CP41229 1560 aa30.66■■■□□ 2.5
SMIM20-205ENST00000614775 NCOA1Q15788 1441 aa30.65■■■□□ 2.5
SMIM20-205ENST00000614775 REREQ9P2R6 1566 aa30.63■■■□□ 2.49
SMIM20-205ENST00000614775 DIP2CQ9Y2E4 1556 aa30.63■■■□□ 2.49
SMIM20-205ENST00000614775 TRAPPC8Q9Y2L5 1435 aa30.61■■■□□ 2.49
SMIM20-205ENST00000614775 AFAP1Q8N556 730 aa30.6■■■□□ 2.49
SMIM20-205ENST00000614775 CHIC1Q5VXU3 224 aa30.59■■■□□ 2.49
SMIM20-205ENST00000614775 ABCA6Q8N139 1617 aa30.55■■■□□ 2.48
SMIM20-205ENST00000614775 AGLP35573 1532 aa30.53■■■□□ 2.48
SMIM20-205ENST00000614775 MYT1LQ9UL68 1186 aa30.53■■■□□ 2.48
SMIM20-205ENST00000614775 UBAP1LF5GYI3 381 aa30.52■■■□□ 2.48
SMIM20-205ENST00000614775 KIF14Q15058 1648 aa30.51■■■□□ 2.48
SMIM20-205ENST00000614775 CAMSAP1Q5T5Y3 1602 aa30.51■■■□□ 2.48
SMIM20-205ENST00000614775 ESF1Q9H501 851 aaKnown RBP30.51■■■□□ 2.47
SMIM20-205ENST00000614775 ARHGAP5Q13017 1502 aa30.51■■■□□ 2.47
SMIM20-205ENST00000614775 MLH3Q9UHC1 1453 aa30.5■■■□□ 2.47
SMIM20-205ENST00000614775 ZNF335Q9H4Z2 1342 aaPredicted RBP30.48■■■□□ 2.47
SMIM20-205ENST00000614775 CNTLNQ9NXG0 1405 aa30.46■■■□□ 2.47
SMIM20-205ENST00000614775 NPATQ14207 1427 aa30.42■■■□□ 2.46
SMIM20-205ENST00000614775 NCKAP5LQ9HCH0 1330 aa30.42■■■□□ 2.46
SMIM20-205ENST00000614775 CDK11AQ9UQ88 783 aaPredicted RBP30.4■■■□□ 2.46
SMIM20-205ENST00000614775 TROQ12816 1431 aaPredicted RBP30.39■■■□□ 2.45
SMIM20-205ENST00000614775 MED1Q15648 1581 aaPredicted RBP30.38■■■□□ 2.45
SMIM20-205ENST00000614775 ATP1B4Q9UN42 357 aaPredicted RBP30.38■■■□□ 2.45
SMIM20-205ENST00000614775 EEA1Q15075 1411 aa30.38■■■□□ 2.45
SMIM20-205ENST00000614775 MROH2AA6NES4 1674 aa30.37■■■□□ 2.45
SMIM20-205ENST00000614775 CDC42BPBQ9Y5S2 1711 aa30.36■■■□□ 2.45
SMIM20-205ENST00000614775 ABCC1P33527 1531 aa30.34■■■□□ 2.45
SMIM20-205ENST00000614775 KIDINS220Q9ULH0 1771 aa30.33■■■□□ 2.45
SMIM20-205ENST00000614775 FMN1Q68DA7 1419 aa30.33■■■□□ 2.45
SMIM20-205ENST00000614775 PLA2R1Q13018 1463 aa30.32■■■□□ 2.44
SMIM20-205ENST00000614775 CLIP1P30622 1438 aa30.31■■■□□ 2.44
SMIM20-205ENST00000614775 ITSN2Q9NZM3 1697 aa30.31■■■□□ 2.44
SMIM20-205ENST00000614775 PKD2Q13563 968 aa30.31■■■□□ 2.44
SMIM20-205ENST00000614775 ZMYM3Q14202 1370 aa30.3■■■□□ 2.44
SMIM20-205ENST00000614775 ZNF142P52746 1687 aaPredicted RBP30.3■■■□□ 2.44
SMIM20-205ENST00000614775 TCOF1Q13428 1488 aaKnown RBP30.29■■■□□ 2.44
SMIM20-205ENST00000614775 HSPA1LP34931 641 aa30.28■■■□□ 2.44
SMIM20-205ENST00000614775 MYO3AQ8NEV4 1616 aa30.28■■■□□ 2.44
SMIM20-205ENST00000614775 PREX2Q70Z35 1606 aa30.27■■■□□ 2.44
SMIM20-205ENST00000614775 SUPT6HQ7KZ85 1726 aaKnown RBP30.25■■■□□ 2.43
SMIM20-205ENST00000614775 CEP170BQ9Y4F5 1589 aaPredicted RBP30.24■■■□□ 2.43
SMIM20-205ENST00000614775 LRRIQ1Q96JM4 1722 aa30.22■■■□□ 2.43
SMIM20-205ENST00000614775 PPP6R1Q9UPN7 881 aa30.2■■■□□ 2.43
SMIM20-205ENST00000614775 SCAF1Q9H7N4 1312 aaKnown RBP30.2■■■□□ 2.42
SMIM20-205ENST00000614775 CLTCQ00610 1675 aaKnown RBP30.19■■■□□ 2.42
SMIM20-205ENST00000614775 ARHGAP35Q9NRY4 1499 aa30.19■■■□□ 2.42
SMIM20-205ENST00000614775 PIP4K2BP78356 416 aa30.18■■■□□ 2.42
SMIM20-205ENST00000614775 PTPRKQ15262 1439 aa30.17■■■□□ 2.42
SMIM20-205ENST00000614775 SAMD9LQ8IVG5 1584 aa30.16■■■□□ 2.42
SMIM20-205ENST00000614775 TOM1O60784 492 aa30.13■■■□□ 2.41
SMIM20-205ENST00000614775 CDC42BPAQ5VT25 1732 aa30.1■■■□□ 2.41
SMIM20-205ENST00000614775 PHF23Q9BUL5 403 aaPredicted RBP30.1■■■□□ 2.41
SMIM20-205ENST00000614775 CPS1P31327 1500 aa30.1■■■□□ 2.41
SMIM20-205ENST00000614775 PLXNC1O60486 1568 aa30.07■■■□□ 2.4
SMIM20-205ENST00000614775 SPAG9O60271 1321 aaKnown RBP30.05■■■□□ 2.4
SMIM20-205ENST00000614775 DNMT1P26358 1616 aaKnown RBP30.04■■■□□ 2.4
SMIM20-205ENST00000614775 A2ML1A8K2U0 1454 aa30.04■■■□□ 2.4
SMIM20-205ENST00000614775 SYCP2Q9BX26 1530 aa30.03■■■□□ 2.4
SMIM20-205ENST00000614775 SHANK2Q9UPX8 1470 aa30.03■■■□□ 2.4
SMIM20-205ENST00000614775 ATP7AQ04656 1500 aa30.01■■■□□ 2.4
SMIM20-205ENST00000614775 UBTFP17480 764 aaKnown RBP30.01■■■□□ 2.39
SMIM20-205ENST00000614775 NEURL4Q96JN8 1562 aa30.01■■■□□ 2.39
SMIM20-205ENST00000614775 POLR1AO95602 1720 aaPredicted RBP30.01■■■□□ 2.39
SMIM20-205ENST00000614775 A2MP01023 1474 aa30■■■□□ 2.39
SMIM20-205ENST00000614775 ALKQ9UM73 1620 aa30■■■□□ 2.39
SMIM20-205ENST00000614775 INO80Q9ULG1 1556 aaPredicted RBP29.98■■■□□ 2.39
SMIM20-205ENST00000614775 GGT6Q6P531 493 aa29.98■■■□□ 2.39
SMIM20-205ENST00000614775 ZNF777Q9ULD5 760 aaPredicted RBP29.98■■■□□ 2.39
SMIM20-205ENST00000614775 CCDC18Q5T9S5 1454 aa29.98■■■□□ 2.39
SMIM20-205ENST00000614775 EHMT2Q96KQ7 1210 aa29.97■■■□□ 2.39
SMIM20-205ENST00000614775 HNRNPMP52272 730 aaKnown RBP eCLIP29.96■■■□□ 2.39
SMIM20-205ENST00000614775 VWDEQ8N2E2 1590 aa29.92■■■□□ 2.38
SMIM20-205ENST00000614775 GPATCH8Q9UKJ3 1502 aaKnown RBP29.9■■■□□ 2.38
SMIM20-205ENST00000614775 CASKIN1Q8WXD9 1431 aa29.89■■■□□ 2.38
SMIM20-205ENST00000614775 KIAA1107Q9UPP5 1409 aa29.88■■■□□ 2.37
SMIM20-205ENST00000614775 ADGBQ8N7X0 1667 aa29.85■■■□□ 2.37
SMIM20-205ENST00000614775 PLEKHH2Q8IVE3 1493 aa29.84■■■□□ 2.37
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms