RNA–Protein interactions for RNA: ENST00000614721.1

ACSM3-215, Transcript of acyl-CoA synthetase medium chain family member 3, humanhuman

TSL 1 (best)

Gene ACSM3, Length 3,311 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACSM3-215ENST00000614721 ABCC5O15440 1437 aa12.57□□□□□ -0.4
ACSM3-215ENST00000614721 SLC4A1APQ9BWU0 796 aaKnown RBP12.57□□□□□ -0.4
ACSM3-215ENST00000614721 SHROOM2Q13796 1616 aa12.57□□□□□ -0.4
ACSM3-215ENST00000614721 ABCC2Q92887 1545 aa12.57□□□□□ -0.4
ACSM3-215ENST00000614721 CAMSAP2Q08AD1 1489 aa12.56□□□□□ -0.4
ACSM3-215ENST00000614721 DAPK1P53355 1430 aa12.56□□□□□ -0.4
ACSM3-215ENST00000614721 MIA2Q96PC5 1412 aa12.56□□□□□ -0.4
ACSM3-215ENST00000614721 ARHGAP5Q13017 1502 aa12.54□□□□□ -0.4
ACSM3-215ENST00000614721 EFCAB2Q5VUJ9 269 aa12.54□□□□□ -0.4
ACSM3-215ENST00000614721 MPHOSPH9Q99550 1183 aa12.54□□□□□ -0.4
ACSM3-215ENST00000614721 HFM1A2PYH4 1435 aa12.53□□□□□ -0.4
ACSM3-215ENST00000614721 ZNF326Q5BKZ1 582 aaKnown RBP12.52□□□□□ -0.4
ACSM3-215ENST00000614721 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.52□□□□□ -0.41
ACSM3-215ENST00000614721 ABCC10Q5T3U5 1492 aa12.5□□□□□ -0.41
ACSM3-215ENST00000614721 ASXL2Q76L83 1435 aa12.5□□□□□ -0.41
ACSM3-215ENST00000614721 KDM6BO15054 1643 aa12.5□□□□□ -0.41
ACSM3-215ENST00000614721 TTC37Q6PGP7 1564 aa12.49□□□□□ -0.41
ACSM3-215ENST00000614721 ADCY10Q96PN6 1610 aa12.49□□□□□ -0.41
ACSM3-215ENST00000614721 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.48□□□□□ -0.41
ACSM3-215ENST00000614721 ZCCHC11Q5TAX3 1644 aaKnown RBP12.48□□□□□ -0.41
ACSM3-215ENST00000614721 TCOF1Q13428 1488 aaKnown RBP12.48□□□□□ -0.41
ACSM3-215ENST00000614721 ZNF316A6NFI3 1004 aaPredicted RBP12.48□□□□□ -0.41
ACSM3-215ENST00000614721 PKD2Q13563 968 aa12.48□□□□□ -0.41
ACSM3-215ENST00000614721 DIEXFQ68CQ4 756 aaKnown RBP12.48□□□□□ -0.41
ACSM3-215ENST00000614721 ANKRD30AQ9BXX3 1397 aa12.48□□□□□ -0.41
ACSM3-215ENST00000614721 C9orf84Q5VXU9 1444 aa12.47□□□□□ -0.41
ACSM3-215ENST00000614721 MAPKBP1O60336 1514 aa12.47□□□□□ -0.41
ACSM3-215ENST00000614721 KDM5BQ9UGL1 1544 aa12.47□□□□□ -0.41
ACSM3-215ENST00000614721 NUP155O75694 1391 aa12.47□□□□□ -0.41
ACSM3-215ENST00000614721 KIF15Q9NS87 1388 aa12.47□□□□□ -0.41
ACSM3-215ENST00000614721 RAPGEF3O95398 923 aa12.47□□□□□ -0.41
ACSM3-215ENST00000614721 FAM69CQ0P6D2 419 aa12.47□□□□□ -0.41
ACSM3-215ENST00000614721 NCOA1Q15788 1441 aa12.46□□□□□ -0.41
ACSM3-215ENST00000614721 TONSLQ96HA7 1378 aa12.46□□□□□ -0.41
ACSM3-215ENST00000614721 CDC42BPAQ5VT25 1732 aa12.45□□□□□ -0.42
ACSM3-215ENST00000614721 SYCP2Q9BX26 1530 aa12.45□□□□□ -0.42
ACSM3-215ENST00000614721 ANKRD50Q9ULJ7 1429 aa12.45□□□□□ -0.42
ACSM3-215ENST00000614721 SPAG9O60271 1321 aaKnown RBP12.45□□□□□ -0.42
ACSM3-215ENST00000614721 WDR7Q9Y4E6 1490 aa12.44□□□□□ -0.42
ACSM3-215ENST00000614721 AKNAQ7Z591 1439 aa12.44□□□□□ -0.42
ACSM3-215ENST00000614721 SENP3Q9H4L4 574 aaPredicted RBP12.44□□□□□ -0.42
ACSM3-215ENST00000614721 TRAPPC8Q9Y2L5 1435 aa12.43□□□□□ -0.42
ACSM3-215ENST00000614721 RGL3Q3MIN7 710 aa12.43□□□□□ -0.42
ACSM3-215ENST00000614721 KDM2AQ9Y2K7 1162 aa12.43□□□□□ -0.42
ACSM3-215ENST00000614721 CLSPNQ9HAW4 1339 aa12.43□□□□□ -0.42
ACSM3-215ENST00000614721 SCAPERQ9BY12 1400 aa12.42□□□□□ -0.42
ACSM3-215ENST00000614721 PLCH2O75038 1416 aa12.41□□□□□ -0.42
ACSM3-215ENST00000614721 ARHGEF12Q9NZN5 1544 aa12.41□□□□□ -0.42
ACSM3-215ENST00000614721 ITSN2Q9NZM3 1697 aa12.41□□□□□ -0.42
ACSM3-215ENST00000614721 DNMT1P26358 1616 aaKnown RBP12.41□□□□□ -0.42
ACSM3-215ENST00000614721 UHRF1BP1LA0JNW5 1464 aa12.41□□□□□ -0.42
ACSM3-215ENST00000614721 KIF3BO15066 747 aa12.4□□□□□ -0.42
ACSM3-215ENST00000614721 SAMD9LQ8IVG5 1584 aa12.4□□□□□ -0.42
ACSM3-215ENST00000614721 MBD5Q9P267 1494 aa12.4□□□□□ -0.42
ACSM3-215ENST00000614721 CDC42BPBQ9Y5S2 1711 aa12.4□□□□□ -0.42
ACSM3-215ENST00000614721 GGT6Q6P531 493 aa12.4□□□□□ -0.42
ACSM3-215ENST00000614721 L3MBTL2Q969R5 705 aa12.4□□□□□ -0.42
ACSM3-215ENST00000614721 FANCAO15360 1455 aa12.39□□□□□ -0.43
ACSM3-215ENST00000614721 CNGB1Q14028 1251 aaPredicted RBP12.39□□□□□ -0.43
ACSM3-215ENST00000614721 CD109Q6YHK3 1445 aa12.39□□□□□ -0.43
ACSM3-215ENST00000614721 CCDC141Q6ZP82 1450 aa12.38□□□□□ -0.43
ACSM3-215ENST00000614721 PPP1R15AO75807 674 aaPredicted RBP12.38□□□□□ -0.43
ACSM3-215ENST00000614721 ROCK1Q13464 1354 aa12.38□□□□□ -0.43
ACSM3-215ENST00000614721 TRHP20396 242 aaPredicted RBP12.37□□□□□ -0.43
ACSM3-215ENST00000614721 YTHDC1Q96MU7 727 aaKnown RBP12.37□□□□□ -0.43
ACSM3-215ENST00000614721 POLR3GLQ9BT43 218 aa12.37□□□□□ -0.43
ACSM3-215ENST00000614721 RSPH4AQ5TD94 716 aa12.36□□□□□ -0.43
ACSM3-215ENST00000614721 PLEKHH2Q8IVE3 1493 aa12.36□□□□□ -0.43
ACSM3-215ENST00000614721 ADGRL1O94910 1474 aa12.35□□□□□ -0.43
ACSM3-215ENST00000614721 PLPPR3Q6T4P5 718 aa12.35□□□□□ -0.43
ACSM3-215ENST00000614721 DENND4BO75064 1496 aaPredicted RBP12.35□□□□□ -0.43
ACSM3-215ENST00000614721 RIMBP3CA6NJZ7 1639 aa12.34□□□□□ -0.43
ACSM3-215ENST00000614721 RIMBP3BA6NNM3 1639 aa12.34□□□□□ -0.43
ACSM3-215ENST00000614721 RIMBP3Q9UFD9 1639 aa12.34□□□□□ -0.43
ACSM3-215ENST00000614721 MLECQ14165 292 aa12.34□□□□□ -0.43
ACSM3-215ENST00000614721 PREX2Q70Z35 1606 aa12.34□□□□□ -0.43
ACSM3-215ENST00000614721 DDX10Q13206 875 aaKnown RBP12.33□□□□□ -0.44
ACSM3-215ENST00000614721 MYO5CQ9NQX4 1742 aa12.33□□□□□ -0.44
ACSM3-215ENST00000614721 CHGAP10645 457 aaKnown RBP12.31□□□□□ -0.44
ACSM3-215ENST00000614721 MIER1Q8N108 512 aa12.31□□□□□ -0.44
ACSM3-215ENST00000614721 DCAF11Q8TEB1 546 aa12.31□□□□□ -0.44
ACSM3-215ENST00000614721 NBPF8Q3BBV2 869 aa12.3□□□□□ -0.44
ACSM3-215ENST00000614721 ANKRD30BQ9BXX2 1392 aa12.3□□□□□ -0.44
ACSM3-215ENST00000614721 PZPP20742 1482 aa12.29□□□□□ -0.44
ACSM3-215ENST00000614721 GCC2Q8IWJ2 1684 aa12.28□□□□□ -0.44
ACSM3-215ENST00000614721 KIAA1107Q9UPP5 1409 aa12.28□□□□□ -0.44
ACSM3-215ENST00000614721 TSPOAP1O95153 1857 aa12.27□□□□□ -0.45
ACSM3-215ENST00000614721 ADGRL2O95490 1459 aa12.27□□□□□ -0.45
ACSM3-215ENST00000614721 NUTM2DQ5VT03 806 aaPredicted RBP12.26□□□□□ -0.45
ACSM3-215ENST00000614721 ABCC1P33527 1531 aa12.25□□□□□ -0.45
ACSM3-215ENST00000614721 SHANK2Q9UPX8 1470 aa12.24□□□□□ -0.45
ACSM3-215ENST00000614721 HSPA5P11021 654 aaKnown RBP12.23□□□□□ -0.45
ACSM3-215ENST00000614721 WASHC2CQ9Y4E1 1318 aa12.23□□□□□ -0.45
ACSM3-215ENST00000614721 ARHGEF5Q12774 1597 aa12.23□□□□□ -0.45
ACSM3-215ENST00000614721 CROCC2H7BZ55 1655 aa12.23□□□□□ -0.45
ACSM3-215ENST00000614721 ADGBQ8N7X0 1667 aa12.22□□□□□ -0.45
ACSM3-215ENST00000614721 ARID4BQ4LE39 1312 aaPredicted RBP12.22□□□□□ -0.45
ACSM3-215ENST00000614721 ABCA9Q8IUA7 1624 aa12.22□□□□□ -0.45
ACSM3-215ENST00000614721 CFAP65Q6ZU64 1925 aaKnown RBP12.21□□□□□ -0.45
ACSM3-215ENST00000614721 TIMELESSQ9UNS1 1208 aa12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms