RNA–Protein interactions for RNA: ENST00000613941.4

SRSF3-204, Transcript of serine and arginine rich splicing factor 3, humanhuman

TSL 4

Gene SRSF3, Length 595 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF3-204ENST00000613941 NUP153P49790 1475 aaKnown RBP18.3■□□□□ 0.52
SRSF3-204ENST00000613941 CEBPAP49715 358 aaPredicted RBP18.28■□□□□ 0.52
SRSF3-204ENST00000613941 PRXQ9BXM0 1461 aa18.27■□□□□ 0.52
SRSF3-204ENST00000613941 LTBP4Q8N2S1 1624 aa18.27■□□□□ 0.51
SRSF3-204ENST00000613941 FAM9AQ8IZU1 332 aaPredicted RBP18.26■□□□□ 0.51
SRSF3-204ENST00000613941 C3P01024 1663 aa18.25■□□□□ 0.51
SRSF3-204ENST00000613941 MAGI2Q86UL8 1455 aa18.25■□□□□ 0.51
SRSF3-204ENST00000613941 UHRF1BP1Q6BDS2 1440 aa18.23■□□□□ 0.51
SRSF3-204ENST00000613941 DMRT2Q9Y5R5 561 aa18.23■□□□□ 0.51
SRSF3-204ENST00000613941 C9orf84Q5VXU9 1444 aa18.2■□□□□ 0.5
SRSF3-204ENST00000613941 PTPRTO14522 1441 aa18.19■□□□□ 0.5
SRSF3-204ENST00000613941 MYO5CQ9NQX4 1742 aa18.19■□□□□ 0.5
SRSF3-204ENST00000613941 ATP10AO60312 1499 aa18.19■□□□□ 0.5
SRSF3-204ENST00000613941 SCAPERQ9BY12 1400 aa18.17■□□□□ 0.5
SRSF3-204ENST00000613941 IQSEC2Q5JU85 1478 aa18.17■□□□□ 0.5
SRSF3-204ENST00000613941 PLEKHD1A6NEE1 506 aa18.15■□□□□ 0.5
SRSF3-204ENST00000613941 CDK13Q14004 1512 aaKnown RBP18.13■□□□□ 0.49
SRSF3-204ENST00000613941 SUPT6HQ7KZ85 1726 aaKnown RBP18.12■□□□□ 0.49
SRSF3-204ENST00000613941 RANGAP1P46060 587 aaPredicted RBP18.12■□□□□ 0.49
SRSF3-204ENST00000613941 DIP2CQ9Y2E4 1556 aa18.11■□□□□ 0.49
SRSF3-204ENST00000613941 ABCA6Q8N139 1617 aa18.1■□□□□ 0.49
SRSF3-204ENST00000613941 MED1Q15648 1581 aaPredicted RBP18.09■□□□□ 0.49
SRSF3-204ENST00000613941 NCOA1Q15788 1441 aa18.08■□□□□ 0.49
SRSF3-204ENST00000613941 PLCH2O75038 1416 aa18.07■□□□□ 0.48
SRSF3-204ENST00000613941 CAMSAP1Q5T5Y3 1602 aa18.07■□□□□ 0.48
SRSF3-204ENST00000613941 KDM5CP41229 1560 aa18.07■□□□□ 0.48
SRSF3-204ENST00000613941 KIF14Q15058 1648 aa18.05■□□□□ 0.48
SRSF3-204ENST00000613941 UBAP1LF5GYI3 381 aa18.04■□□□□ 0.48
SRSF3-204ENST00000613941 REREQ9P2R6 1566 aa18.04■□□□□ 0.48
SRSF3-204ENST00000613941 ZNF518AQ6AHZ1 1483 aa18.03■□□□□ 0.48
SRSF3-204ENST00000613941 ZNF335Q9H4Z2 1342 aaPredicted RBP18.01■□□□□ 0.47
SRSF3-204ENST00000613941 CDC42BPBQ9Y5S2 1711 aa18.01■□□□□ 0.47
SRSF3-204ENST00000613941 TRAPPC8Q9Y2L5 1435 aa18■□□□□ 0.47
SRSF3-204ENST00000613941 MYT1LQ9UL68 1186 aa17.99■□□□□ 0.47
SRSF3-204ENST00000613941 MROH2AA6NES4 1674 aa17.99■□□□□ 0.47
SRSF3-204ENST00000613941 ARHGAP5Q13017 1502 aa17.98■□□□□ 0.47
SRSF3-204ENST00000613941 ZNF142P52746 1687 aaPredicted RBP17.98■□□□□ 0.47
SRSF3-204ENST00000613941 MYO3AQ8NEV4 1616 aa17.98■□□□□ 0.47
SRSF3-204ENST00000613941 ITSN2Q9NZM3 1697 aa17.97■□□□□ 0.47
SRSF3-204ENST00000613941 AFAP1Q8N556 730 aa17.97■□□□□ 0.47
SRSF3-204ENST00000613941 LRRIQ1Q96JM4 1722 aa17.96■□□□□ 0.47
SRSF3-204ENST00000613941 AGLP35573 1532 aa17.96■□□□□ 0.47
SRSF3-204ENST00000613941 KIDINS220Q9ULH0 1771 aa17.96■□□□□ 0.47
SRSF3-204ENST00000613941 NCKAP5LQ9HCH0 1330 aa17.96■□□□□ 0.46
SRSF3-204ENST00000613941 EFCAB2Q5VUJ9 269 aa17.95■□□□□ 0.46
SRSF3-204ENST00000613941 CLTCQ00610 1675 aaKnown RBP17.94■□□□□ 0.46
SRSF3-204ENST00000613941 ESF1Q9H501 851 aaKnown RBP17.94■□□□□ 0.46
SRSF3-204ENST00000613941 SCAF1Q9H7N4 1312 aaKnown RBP17.92■□□□□ 0.46
SRSF3-204ENST00000613941 HSPA1LP34931 641 aa17.91■□□□□ 0.46
SRSF3-204ENST00000613941 PREX2Q70Z35 1606 aa17.9■□□□□ 0.46
SRSF3-204ENST00000613941 POLR1AO95602 1720 aaPredicted RBP17.89■□□□□ 0.46
SRSF3-204ENST00000613941 MLH3Q9UHC1 1453 aa17.89■□□□□ 0.45
SRSF3-204ENST00000613941 CEP170BQ9Y4F5 1589 aaPredicted RBP17.89■□□□□ 0.45
SRSF3-204ENST00000613941 CNTLNQ9NXG0 1405 aa17.89■□□□□ 0.45
SRSF3-204ENST00000613941 ABCC1P33527 1531 aa17.88■□□□□ 0.45
SRSF3-204ENST00000613941 CSRNP3Q8WYN3 585 aa17.88■□□□□ 0.45
SRSF3-204ENST00000613941 PIP4K2BP78356 416 aa17.87■□□□□ 0.45
SRSF3-204ENST00000613941 NPATQ14207 1427 aa17.87■□□□□ 0.45
SRSF3-204ENST00000613941 ATP1B4Q9UN42 357 aaPredicted RBP17.86■□□□□ 0.45
SRSF3-204ENST00000613941 PLA2R1Q13018 1463 aa17.85■□□□□ 0.45
SRSF3-204ENST00000613941 TCOF1Q13428 1488 aaKnown RBP17.85■□□□□ 0.45
SRSF3-204ENST00000613941 CDC42BPAQ5VT25 1732 aa17.85■□□□□ 0.45
SRSF3-204ENST00000613941 PHF23Q9BUL5 403 aaPredicted RBP17.84■□□□□ 0.45
SRSF3-204ENST00000613941 TROQ12816 1431 aaPredicted RBP17.81■□□□□ 0.44
SRSF3-204ENST00000613941 ZMYM3Q14202 1370 aa17.8■□□□□ 0.44
SRSF3-204ENST00000613941 PPP6R1Q9UPN7 881 aa17.79■□□□□ 0.44
SRSF3-204ENST00000613941 ALKQ9UM73 1620 aa17.79■□□□□ 0.44
SRSF3-204ENST00000613941 SAMD9LQ8IVG5 1584 aa17.79■□□□□ 0.44
SRSF3-204ENST00000613941 PKD2Q13563 968 aa17.78■□□□□ 0.44
SRSF3-204ENST00000613941 DNMT1P26358 1616 aaKnown RBP17.78■□□□□ 0.44
SRSF3-204ENST00000613941 NEURL4Q96JN8 1562 aa17.78■□□□□ 0.44
SRSF3-204ENST00000613941 CLIP1P30622 1438 aa17.77■□□□□ 0.44
SRSF3-204ENST00000613941 CPS1P31327 1500 aa17.76■□□□□ 0.43
SRSF3-204ENST00000613941 PTPRKQ15262 1439 aa17.75■□□□□ 0.43
SRSF3-204ENST00000613941 SENP3Q9H4L4 574 aaPredicted RBP17.75■□□□□ 0.43
SRSF3-204ENST00000613941 TOM1O60784 492 aa17.74■□□□□ 0.43
SRSF3-204ENST00000613941 CDK11AQ9UQ88 783 aaPredicted RBP17.74■□□□□ 0.43
SRSF3-204ENST00000613941 FMN1Q68DA7 1419 aa17.73■□□□□ 0.43
SRSF3-204ENST00000613941 PLXNC1O60486 1568 aa17.73■□□□□ 0.43
SRSF3-204ENST00000613941 SYCP2Q9BX26 1530 aa17.72■□□□□ 0.43
SRSF3-204ENST00000613941 STRCP1A6NGW2 1772 aa17.72■□□□□ 0.43
SRSF3-204ENST00000613941 SHANK2Q9UPX8 1470 aa17.71■□□□□ 0.43
SRSF3-204ENST00000613941 INO80Q9ULG1 1556 aaPredicted RBP17.7■□□□□ 0.42
SRSF3-204ENST00000613941 ATP7AQ04656 1500 aa17.7■□□□□ 0.42
SRSF3-204ENST00000613941 VWDEQ8N2E2 1590 aa17.7■□□□□ 0.42
SRSF3-204ENST00000613941 A2ML1A8K2U0 1454 aa17.69■□□□□ 0.42
SRSF3-204ENST00000613941 ARHGAP35Q9NRY4 1499 aa17.69■□□□□ 0.42
SRSF3-204ENST00000613941 SETD1AO15047 1707 aaKnown RBP17.68■□□□□ 0.42
SRSF3-204ENST00000613941 EEA1Q15075 1411 aa17.68■□□□□ 0.42
SRSF3-204ENST00000613941 EHMT2Q96KQ7 1210 aa17.67■□□□□ 0.42
SRSF3-204ENST00000613941 ADGBQ8N7X0 1667 aa17.67■□□□□ 0.42
SRSF3-204ENST00000613941 RNF17Q9BXT8 1623 aaKnown RBP17.65■□□□□ 0.42
SRSF3-204ENST00000613941 A2MP01023 1474 aa17.64■□□□□ 0.41
SRSF3-204ENST00000613941 GGT6Q6P531 493 aa17.63■□□□□ 0.41
SRSF3-204ENST00000613941 ZNF777Q9ULD5 760 aaPredicted RBP17.63■□□□□ 0.41
SRSF3-204ENST00000613941 IQGAP1P46940 1657 aa17.63■□□□□ 0.41
SRSF3-204ENST00000613941 RGS17Q9UGC6 210 aaPredicted RBP17.62■□□□□ 0.41
SRSF3-204ENST00000613941 SPAG9O60271 1321 aaKnown RBP17.62■□□□□ 0.41
SRSF3-204ENST00000613941 XIRP1Q702N8 1843 aaKnown RBP17.6■□□□□ 0.41
SRSF3-204ENST00000613941 SYNMO15061 1565 aa17.59■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms