RNA–Protein interactions for RNA: ENST00000613214.4

TNXB-209, Transcript of tenascin XB, humanhuman

TSL 5 BASIC

Gene TNXB, Length 6,842 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNXB-209ENST00000613214 HSCBQ8IWL3 235 aa19.74■□□□□ 0.75
TNXB-209ENST00000613214 ANP32EQ9BTT0 268 aa19.74■□□□□ 0.75
TNXB-209ENST00000613214 CLIP1P30622 1438 aa19.74■□□□□ 0.75
TNXB-209ENST00000613214 MORC1Q86VD1 984 aa19.74■□□□□ 0.75
TNXB-209ENST00000613214 FOXD1Q16676 465 aa19.73■□□□□ 0.75
TNXB-209ENST00000613214 TMX4Q9H1E5 349 aaPredicted RBP19.73■□□□□ 0.75
TNXB-209ENST00000613214 LTV1Q96GA3 475 aaPredicted RBP19.72■□□□□ 0.75
TNXB-209ENST00000613214 FOXD4L1Q9NU39 408 aa19.71■□□□□ 0.75
TNXB-209ENST00000613214 MSH5O43196 834 aa19.7■□□□□ 0.74
TNXB-209ENST00000613214 EIF4G1Q04637 1599 aaKnown RBP19.69■□□□□ 0.74
TNXB-209ENST00000613214 GORABQ5T7V8 394 aa19.69■□□□□ 0.74
TNXB-209ENST00000613214 TAF7LQ5H9L4 462 aa19.69■□□□□ 0.74
TNXB-209ENST00000613214 MCCP23508 829 aa19.66■□□□□ 0.74
TNXB-209ENST00000613214 NRDCO43847 1150 aa19.66■□□□□ 0.74
TNXB-209ENST00000613214 KIAA2012Q0VF49 1180 aa19.66■□□□□ 0.74
TNXB-209ENST00000613214 FOXD4L5Q5VV16 416 aaPredicted RBP19.66■□□□□ 0.74
TNXB-209ENST00000613214 FOXD4L4Q8WXT5 416 aaPredicted RBP19.66■□□□□ 0.74
TNXB-209ENST00000613214 KLHL34Q8N239 644 aa19.65■□□□□ 0.74
TNXB-209ENST00000613214 NOP58Q9Y2X3 529 aaKnown RBP19.65■□□□□ 0.74
TNXB-209ENST00000613214 RAD21O60216 631 aa19.64■□□□□ 0.74
TNXB-209ENST00000613214 MSNP26038 577 aaKnown RBP19.64■□□□□ 0.73
TNXB-209ENST00000613214 KIAA1211Q6ZU35 1233 aa19.64■□□□□ 0.73
TNXB-209ENST00000613214 ITPRIPQ8IWB1 547 aa19.64■□□□□ 0.73
TNXB-209ENST00000613214 TOMM22Q9NS69 142 aa19.64■□□□□ 0.73
TNXB-209ENST00000613214 CHAF1AQ13111 956 aaPredicted RBP19.63■□□□□ 0.73
TNXB-209ENST00000613214 SLC4A10Q6U841 1118 aa19.63■□□□□ 0.73
TNXB-209ENST00000613214 RSF1Q96T23 1441 aaPredicted RBP19.63■□□□□ 0.73
TNXB-209ENST00000613214 FRAT2O75474 233 aaPredicted RBP19.62■□□□□ 0.73
TNXB-209ENST00000613214 RASSF8Q8NHQ8 419 aa19.62■□□□□ 0.73
TNXB-209ENST00000613214 TMF1P82094 1093 aa19.62■□□□□ 0.73
TNXB-209ENST00000613214 TRIM6-TRIM34B2RNG4 842 aa19.61■□□□□ 0.73
TNXB-209ENST00000613214 A0A0U1RQG5 324 aaPredicted RBP19.6■□□□□ 0.73
TNXB-209ENST00000613214 SLKQ9H2G2 1235 aaPredicted RBP19.59■□□□□ 0.73
TNXB-209ENST00000613214 U2AF1L5P0DN76 240 aaPredicted RBP19.57■□□□□ 0.72
TNXB-209ENST00000613214 U2AF1Q01081 240 aaKnown RBP eCLIP19.57■□□□□ 0.72
TNXB-209ENST00000613214 GTF2E1P29083 439 aaPredicted RBP19.56■□□□□ 0.72
TNXB-209ENST00000613214 NGEFQ8N5V2 710 aa19.56■□□□□ 0.72
TNXB-209ENST00000613214 CCDC146Q8IYE0 955 aa19.56■□□□□ 0.72
TNXB-209ENST00000613214 AEBP2Q6ZN18 517 aaPredicted RBP19.56■□□□□ 0.72
TNXB-209ENST00000613214 PPP4R2Q9NY27 417 aa19.55■□□□□ 0.72
TNXB-209ENST00000613214 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP19.55■□□□□ 0.72
TNXB-209ENST00000613214 SUGP2Q8IX01 1082 aaKnown RBP eCLIP19.54■□□□□ 0.72
TNXB-209ENST00000613214 HDGFL2Q7Z4V5 671 aaPredicted RBP19.54■□□□□ 0.72
TNXB-209ENST00000613214 KANK1Q14678 1352 aa19.53■□□□□ 0.72
TNXB-209ENST00000613214 SAMD1Q6SPF0 538 aaPredicted RBP19.53■□□□□ 0.72
TNXB-209ENST00000613214 FOXD4L6Q3SYB3 417 aaPredicted RBP19.53■□□□□ 0.72
TNXB-209ENST00000613214 FOXD4L3Q6VB84 417 aaPredicted RBP19.53■□□□□ 0.72
TNXB-209ENST00000613214 FBXW7Q969H0 707 aa19.53■□□□□ 0.72
TNXB-209ENST00000613214 PES1O00541 588 aaKnown RBP19.52■□□□□ 0.72
TNXB-209ENST00000613214 MFAP1P55081 439 aaKnown RBP19.52■□□□□ 0.72
TNXB-209ENST00000613214 KRI1Q8N9T8 703 aaKnown RBP19.52■□□□□ 0.72
TNXB-209ENST00000613214 MARCH6O60337 910 aa19.52■□□□□ 0.72
TNXB-209ENST00000613214 CHMP4BQ9H444 224 aaKnown RBP19.52■□□□□ 0.71
TNXB-209ENST00000613214 HDGFP51858 240 aaKnown RBP19.51■□□□□ 0.71
TNXB-209ENST00000613214 L1TD1Q5T7N2 865 aaKnown RBP19.51■□□□□ 0.71
TNXB-209ENST00000613214 MS4A1P11836 297 aa19.5■□□□□ 0.71
TNXB-209ENST00000613214 CLUAP1Q96AJ1 413 aa19.5■□□□□ 0.71
TNXB-209ENST00000613214 PHF23Q9BUL5 403 aaPredicted RBP19.49■□□□□ 0.71
TNXB-209ENST00000613214 CCNB3Q8WWL7 1395 aa19.48■□□□□ 0.71
TNXB-209ENST00000613214 NGDNQ8NEJ9 315 aaKnown RBP19.46■□□□□ 0.71
TNXB-209ENST00000613214 CEP162Q5TB80 1403 aa19.45■□□□□ 0.7
TNXB-209ENST00000613214 PATL2C9JE40 543 aaKnown RBP19.44■□□□□ 0.7
TNXB-209ENST00000613214 SYTL4Q96C24 671 aaPredicted RBP19.43■□□□□ 0.7
TNXB-209ENST00000613214 NECTIN2Q92692 538 aa19.42■□□□□ 0.7
TNXB-209ENST00000613214 MEX3CQ5U5Q3 659 aaKnown RBP19.42■□□□□ 0.7
TNXB-209ENST00000613214 CNKSR2Q8WXI2 1034 aa19.42■□□□□ 0.7
TNXB-209ENST00000613214 AMPHP49418 695 aa19.41■□□□□ 0.7
TNXB-209ENST00000613214 EVA1CP58658 441 aa19.41■□□□□ 0.7
TNXB-209ENST00000613214 DCAF1Q9Y4B6 1507 aa19.4■□□□□ 0.7
TNXB-209ENST00000613214 DEKP35659 375 aaKnown RBP19.4■□□□□ 0.7
TNXB-209ENST00000613214 RRP7AQ9Y3A4 280 aaKnown RBP19.4■□□□□ 0.7
TNXB-209ENST00000613214 STK31Q9BXU1 1019 aa19.4■□□□□ 0.7
TNXB-209ENST00000613214 ELL2O00472 640 aaPredicted RBP19.4■□□□□ 0.7
TNXB-209ENST00000613214 HSPA5P11021 654 aaKnown RBP19.39■□□□□ 0.7
TNXB-209ENST00000613214 SMC4Q9NTJ3 1288 aa19.39■□□□□ 0.7
TNXB-209ENST00000613214 PKD2Q13563 968 aa19.38■□□□□ 0.69
TNXB-209ENST00000613214 SPAG9O60271 1321 aaKnown RBP19.37■□□□□ 0.69
TNXB-209ENST00000613214 GOLGA3Q08378 1498 aa19.37■□□□□ 0.69
TNXB-209ENST00000613214 GPATCH3Q96I76 525 aa19.36■□□□□ 0.69
TNXB-209ENST00000613214 CEP89Q96ST8 783 aa19.36■□□□□ 0.69
TNXB-209ENST00000613214 ROCK2O75116 1388 aaKnown RBP19.35■□□□□ 0.69
TNXB-209ENST00000613214 BCL11BQ9C0K0 894 aaPredicted RBP19.35■□□□□ 0.69
TNXB-209ENST00000613214 RILPL2Q969X0 211 aa19.35■□□□□ 0.69
TNXB-209ENST00000613214 IPO8O15397 1037 aaKnown RBP19.35■□□□□ 0.69
TNXB-209ENST00000613214 MYO15BQ96JP2 1530 aa19.33■□□□□ 0.69
TNXB-209ENST00000613214 TPM4P67936 248 aa19.33■□□□□ 0.68
TNXB-209ENST00000613214 KDM4AO75164 1064 aa19.32■□□□□ 0.68
TNXB-209ENST00000613214 FOSBP53539 338 aa19.32■□□□□ 0.68
TNXB-209ENST00000613214 CCAR2Q8N163 923 aaKnown RBP19.32■□□□□ 0.68
TNXB-209ENST00000613214 TCEAL9Q9UHQ7 104 aa19.31■□□□□ 0.68
TNXB-209ENST00000613214 BCL2L13Q9BXK5 485 aa19.31■□□□□ 0.68
TNXB-209ENST00000613214 TPD52L1Q16890 204 aaPredicted RBP19.31■□□□□ 0.68
TNXB-209ENST00000613214 CTDP1Q9Y5B0 961 aaPredicted RBP19.31■□□□□ 0.68
TNXB-209ENST00000613214 TRIM34Q9BYJ4 488 aa19.3■□□□□ 0.68
TNXB-209ENST00000613214 SF3A1Q15459 793 aaKnown RBP19.3■□□□□ 0.68
TNXB-209ENST00000613214 CWC22Q9HCG8 908 aaKnown RBP19.3■□□□□ 0.68
TNXB-209ENST00000613214 KTN1Q86UP2 1357 aaKnown RBP19.3■□□□□ 0.68
TNXB-209ENST00000613214 EIF2S2P20042 333 aaKnown RBP19.29■□□□□ 0.68
TNXB-209ENST00000613214 GBP4Q96PP9 640 aa19.28■□□□□ 0.68
TNXB-209ENST00000613214 KIF3BO15066 747 aa19.28■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms