RNA–Protein interactions for RNA: ENST00000612417.4

CDH1-213, Transcript of cadherin 1, humanhuman

TSL 5 BASIC

Gene CDH1, Length 2,068 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-213ENST00000612417 GPATCH8Q9UKJ3 1502 aaKnown RBP21.15■□□□□ 0.98
CDH1-213ENST00000612417 ZNF644Q9H582 1327 aaPredicted RBP21.14■□□□□ 0.98
CDH1-213ENST00000612417 CHIC2Q9UKJ5 165 aa21.14■□□□□ 0.98
CDH1-213ENST00000612417 ZNF777Q9ULD5 760 aaPredicted RBP21.14■□□□□ 0.98
CDH1-213ENST00000612417 UHRF1BP1LA0JNW5 1464 aa21.12■□□□□ 0.97
CDH1-213ENST00000612417 HFM1A2PYH4 1435 aa21.11■□□□□ 0.97
CDH1-213ENST00000612417 ABCC10Q5T3U5 1492 aa21.1■□□□□ 0.97
CDH1-213ENST00000612417 CDC42BPAQ5VT25 1732 aa21.1■□□□□ 0.97
CDH1-213ENST00000612417 ZCCHC11Q5TAX3 1644 aaKnown RBP21.1■□□□□ 0.97
CDH1-213ENST00000612417 RRP7BPQ9NSQ0 103 aa21.09■□□□□ 0.97
CDH1-213ENST00000612417 KCNH8Q96L42 1107 aa21.08■□□□□ 0.96
CDH1-213ENST00000612417 CAMSAP2Q08AD1 1489 aa21.08■□□□□ 0.96
CDH1-213ENST00000612417 KDM5BQ9UGL1 1544 aa21.06■□□□□ 0.96
CDH1-213ENST00000612417 DAPK1P53355 1430 aa21.06■□□□□ 0.96
CDH1-213ENST00000612417 NAIPQ13075 1403 aa21.05■□□□□ 0.96
CDH1-213ENST00000612417 DNMT1P26358 1616 aaKnown RBP21.04■□□□□ 0.96
CDH1-213ENST00000612417 SIN3AQ96ST3 1273 aa21.04■□□□□ 0.96
CDH1-213ENST00000612417 ABCC5O15440 1437 aa21.03■□□□□ 0.96
CDH1-213ENST00000612417 TTC37Q6PGP7 1564 aa20.99■□□□□ 0.95
CDH1-213ENST00000612417 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP20.99■□□□□ 0.95
CDH1-213ENST00000612417 GCC2Q8IWJ2 1684 aa20.98■□□□□ 0.95
CDH1-213ENST00000612417 CDC42BPBQ9Y5S2 1711 aa20.98■□□□□ 0.95
CDH1-213ENST00000612417 AKNAQ7Z591 1439 aa20.97■□□□□ 0.95
CDH1-213ENST00000612417 PREX2Q70Z35 1606 aa20.97■□□□□ 0.95
CDH1-213ENST00000612417 PPP1R15AO75807 674 aaPredicted RBP20.96■□□□□ 0.95
CDH1-213ENST00000612417 ROCK1Q13464 1354 aa20.96■□□□□ 0.95
CDH1-213ENST00000612417 MYO5CQ9NQX4 1742 aa20.95■□□□□ 0.94
CDH1-213ENST00000612417 NPM1P06748 294 aaKnown RBP eCLIP20.94■□□□□ 0.94
CDH1-213ENST00000612417 ARHGAP5Q13017 1502 aa20.94■□□□□ 0.94
CDH1-213ENST00000612417 HNRNPMP52272 730 aaKnown RBP eCLIP20.93■□□□□ 0.94
CDH1-213ENST00000612417 TRIM52Q96A61 297 aa20.92■□□□□ 0.94
CDH1-213ENST00000612417 CROCC2H7BZ55 1655 aa20.92■□□□□ 0.94
CDH1-213ENST00000612417 ADGBQ8N7X0 1667 aa20.91■□□□□ 0.94
CDH1-213ENST00000612417 KDM6BO15054 1643 aa20.9■□□□□ 0.94
CDH1-213ENST00000612417 TSPY4P0CV99 314 aa20.9■□□□□ 0.94
CDH1-213ENST00000612417 TSPY10P0CW01 314 aa20.9■□□□□ 0.94
CDH1-213ENST00000612417 SAMD9LQ8IVG5 1584 aa20.9■□□□□ 0.94
CDH1-213ENST00000612417 WDR7Q9Y4E6 1490 aa20.9■□□□□ 0.94
CDH1-213ENST00000612417 TONSLQ96HA7 1378 aa20.88■□□□□ 0.93
CDH1-213ENST00000612417 ANKRD30AQ9BXX3 1397 aa20.87■□□□□ 0.93
CDH1-213ENST00000612417 NCOA1Q15788 1441 aa20.86■□□□□ 0.93
CDH1-213ENST00000612417 ASXL2Q76L83 1435 aa20.86■□□□□ 0.93
CDH1-213ENST00000612417 PLCH2O75038 1416 aa20.85■□□□□ 0.93
CDH1-213ENST00000612417 C9orf84Q5VXU9 1444 aa20.85■□□□□ 0.93
CDH1-213ENST00000612417 ARHGEF5Q12774 1597 aa20.85■□□□□ 0.93
CDH1-213ENST00000612417 EFCAB2Q5VUJ9 269 aa20.84■□□□□ 0.93
CDH1-213ENST00000612417 ADGRL2O95490 1459 aa20.84■□□□□ 0.93
CDH1-213ENST00000612417 RSPH4AQ5TD94 716 aa20.84■□□□□ 0.93
CDH1-213ENST00000612417 MBD5Q9P267 1494 aa20.83■□□□□ 0.93
CDH1-213ENST00000612417 SHANK2Q9UPX8 1470 aa20.83■□□□□ 0.93
CDH1-213ENST00000612417 SYCP2Q9BX26 1530 aa20.82■□□□□ 0.92
CDH1-213ENST00000612417 CCDC141Q6ZP82 1450 aa20.82■□□□□ 0.92
CDH1-213ENST00000612417 DDX10Q13206 875 aaKnown RBP20.81■□□□□ 0.92
CDH1-213ENST00000612417 PLEKHH2Q8IVE3 1493 aa20.81■□□□□ 0.92
CDH1-213ENST00000612417 CYB5RLQ6IPT4 315 aa20.79■□□□□ 0.92
CDH1-213ENST00000612417 DENND4BO75064 1496 aaPredicted RBP20.78■□□□□ 0.92
CDH1-213ENST00000612417 KIAA1107Q9UPP5 1409 aa20.78■□□□□ 0.92
CDH1-213ENST00000612417 MPHOSPH9Q99550 1183 aa20.77■□□□□ 0.92
CDH1-213ENST00000612417 RIMBP3CA6NJZ7 1639 aa20.76■□□□□ 0.91
CDH1-213ENST00000612417 RIMBP3BA6NNM3 1639 aa20.76■□□□□ 0.91
CDH1-213ENST00000612417 RIMBP3Q9UFD9 1639 aa20.76■□□□□ 0.91
CDH1-213ENST00000612417 ABCA9Q8IUA7 1624 aa20.76■□□□□ 0.91
CDH1-213ENST00000612417 ANKRD50Q9ULJ7 1429 aa20.75■□□□□ 0.91
CDH1-213ENST00000612417 KIF15Q9NS87 1388 aa20.74■□□□□ 0.91
CDH1-213ENST00000612417 ARAP3Q8WWN8 1544 aa20.73■□□□□ 0.91
CDH1-213ENST00000612417 CCER2I3L3R5 266 aa20.73■□□□□ 0.91
CDH1-213ENST00000612417 SUPT16HQ9Y5B9 1047 aaKnown RBP20.73■□□□□ 0.91
CDH1-213ENST00000612417 ARHGEF12Q9NZN5 1544 aa20.72■□□□□ 0.91
CDH1-213ENST00000612417 SLC4A1APQ9BWU0 796 aaKnown RBP20.72■□□□□ 0.91
CDH1-213ENST00000612417 ABCC1P33527 1531 aa20.71■□□□□ 0.91
CDH1-213ENST00000612417 FANCAO15360 1455 aa20.7■□□□□ 0.9
CDH1-213ENST00000612417 FOXD1Q16676 465 aa20.69■□□□□ 0.9
CDH1-213ENST00000612417 MAST1Q9Y2H9 1570 aa20.69■□□□□ 0.9
CDH1-213ENST00000612417 TRAPPC8Q9Y2L5 1435 aa20.67■□□□□ 0.9
CDH1-213ENST00000612417 HIRIP3Q9BW71 556 aaPredicted RBP20.66■□□□□ 0.9
CDH1-213ENST00000612417 ANP32CO43423 234 aa20.65■□□□□ 0.9
CDH1-213ENST00000612417 AFAP1Q8N556 730 aa20.65■□□□□ 0.9
CDH1-213ENST00000612417 CD109Q6YHK3 1445 aa20.63■□□□□ 0.89
CDH1-213ENST00000612417 NUP155O75694 1391 aa20.63■□□□□ 0.89
CDH1-213ENST00000612417 PZPP20742 1482 aa20.63■□□□□ 0.89
CDH1-213ENST00000612417 SPAG9O60271 1321 aaKnown RBP20.63■□□□□ 0.89
CDH1-213ENST00000612417 ADGRL1O94910 1474 aa20.62■□□□□ 0.89
CDH1-213ENST00000612417 PLXNC1O60486 1568 aa20.62■□□□□ 0.89
CDH1-213ENST00000612417 SCAPERQ9BY12 1400 aa20.61■□□□□ 0.89
CDH1-213ENST00000612417 MYT1LQ9UL68 1186 aa20.6■□□□□ 0.89
CDH1-213ENST00000612417 PKD2Q13563 968 aa20.58■□□□□ 0.89
CDH1-213ENST00000612417 ANKRD30BQ9BXX2 1392 aa20.57■□□□□ 0.88
CDH1-213ENST00000612417 RPRD2Q5VT52 1461 aaKnown RBP20.57■□□□□ 0.88
CDH1-213ENST00000612417 DUOX2Q9NRD8 1548 aa20.57■□□□□ 0.88
CDH1-213ENST00000612417 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.55■□□□□ 0.88
CDH1-213ENST00000612417 CFAP74Q9C0B2 1584 aa20.55■□□□□ 0.88
CDH1-213ENST00000612417 RTEL1-TNFRSF6BF6WH68 1400 aa20.55■□□□□ 0.88
CDH1-213ENST00000612417 TEX14Q8IWB6 1497 aa20.53■□□□□ 0.88
CDH1-213ENST00000612417 KDM5DQ9BY66 1539 aa20.53■□□□□ 0.88
CDH1-213ENST00000612417 ZFYVE16Q7Z3T8 1539 aa20.52■□□□□ 0.88
CDH1-213ENST00000612417 ERBINQ96RT1 1412 aa20.51■□□□□ 0.87
CDH1-213ENST00000612417 HSPA5P11021 654 aaKnown RBP20.51■□□□□ 0.87
CDH1-213ENST00000612417 ATP7AQ04656 1500 aa20.5■□□□□ 0.87
CDH1-213ENST00000612417 POLR1AO95602 1720 aaPredicted RBP20.5■□□□□ 0.87
CDH1-213ENST00000612417 WASHC2AQ641Q2 1341 aa20.49■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 73.7 ms