RNA–Protein interactions for RNA: ENST00000611068.1

RTN1-209, Transcript of reticulon 1, humanhuman

TSL 5 BASIC

Gene RTN1, Length 2,647 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN1-209ENST00000611068 UACAQ9BZF9 1416 aa22.89■■□□□ 1.25
RTN1-209ENST00000611068 OSCARQ8IYS5 282 aa22.88■■□□□ 1.25
RTN1-209ENST00000611068 CLSPNQ9HAW4 1339 aa22.87■■□□□ 1.25
RTN1-209ENST00000611068 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP22.87■■□□□ 1.25
RTN1-209ENST00000611068 SIN3AQ96ST3 1273 aa22.81■■□□□ 1.24
RTN1-209ENST00000611068 ANO8Q9HCE9 1232 aaPredicted RBP22.79■■□□□ 1.24
RTN1-209ENST00000611068 GPATCH8Q9UKJ3 1502 aaKnown RBP22.79■■□□□ 1.24
RTN1-209ENST00000611068 MIA2Q96PC5 1412 aa22.79■■□□□ 1.24
RTN1-209ENST00000611068 TRIM52Q96A61 297 aa22.77■■□□□ 1.24
RTN1-209ENST00000611068 TCOF1Q13428 1488 aaKnown RBP22.77■■□□□ 1.24
RTN1-209ENST00000611068 NAIPQ13075 1403 aa22.76■■□□□ 1.23
RTN1-209ENST00000611068 HNRNPMP52272 730 aaKnown RBP eCLIP22.74■■□□□ 1.23
RTN1-209ENST00000611068 HFM1A2PYH4 1435 aa22.73■■□□□ 1.23
RTN1-209ENST00000611068 ABCC2Q92887 1545 aa22.72■■□□□ 1.23
RTN1-209ENST00000611068 ABCC5O15440 1437 aa22.72■■□□□ 1.23
RTN1-209ENST00000611068 DAPK1P53355 1430 aa22.72■■□□□ 1.23
RTN1-209ENST00000611068 CAMSAP2Q08AD1 1489 aa22.71■■□□□ 1.23
RTN1-209ENST00000611068 MAPKBP1O60336 1514 aa22.7■■□□□ 1.22
RTN1-209ENST00000611068 RBM19Q9Y4C8 960 aaKnown RBP22.69■■□□□ 1.22
RTN1-209ENST00000611068 ABCC10Q5T3U5 1492 aa22.68■■□□□ 1.22
RTN1-209ENST00000611068 BCANQ96GW7 911 aa22.67■■□□□ 1.22
RTN1-209ENST00000611068 KDM6BO15054 1643 aa22.67■■□□□ 1.22
RTN1-209ENST00000611068 FOXD1Q16676 465 aa22.66■■□□□ 1.22
RTN1-209ENST00000611068 ADCY10Q96PN6 1610 aa22.66■■□□□ 1.22
RTN1-209ENST00000611068 MSH5O43196 834 aa22.65■■□□□ 1.22
RTN1-209ENST00000611068 CDC42BPAQ5VT25 1732 aa22.64■■□□□ 1.21
RTN1-209ENST00000611068 ZCCHC11Q5TAX3 1644 aaKnown RBP22.61■■□□□ 1.21
RTN1-209ENST00000611068 ITSN2Q9NZM3 1697 aa22.61■■□□□ 1.21
RTN1-209ENST00000611068 DNMT1P26358 1616 aaKnown RBP22.59■■□□□ 1.21
RTN1-209ENST00000611068 TTC37Q6PGP7 1564 aa22.59■■□□□ 1.21
RTN1-209ENST00000611068 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP22.58■■□□□ 1.2
RTN1-209ENST00000611068 TSPY4P0CV99 314 aa22.57■■□□□ 1.2
RTN1-209ENST00000611068 TSPY10P0CW01 314 aa22.57■■□□□ 1.2
RTN1-209ENST00000611068 KDM5BQ9UGL1 1544 aa22.55■■□□□ 1.2
RTN1-209ENST00000611068 AKNAQ7Z591 1439 aa22.55■■□□□ 1.2
RTN1-209ENST00000611068 ARHGAP5Q13017 1502 aa22.55■■□□□ 1.2
RTN1-209ENST00000611068 CYB5RLQ6IPT4 315 aa22.54■■□□□ 1.2
RTN1-209ENST00000611068 MPHOSPH9Q99550 1183 aa22.54■■□□□ 1.2
RTN1-209ENST00000611068 UHRF1BP1LA0JNW5 1464 aa22.53■■□□□ 1.2
RTN1-209ENST00000611068 CDC42BPBQ9Y5S2 1711 aa22.52■■□□□ 1.2
RTN1-209ENST00000611068 NCOA1Q15788 1441 aa22.52■■□□□ 1.19
RTN1-209ENST00000611068 NPM1P06748 294 aaKnown RBP eCLIP22.51■■□□□ 1.19
RTN1-209ENST00000611068 ROCK1Q13464 1354 aa22.5■■□□□ 1.19
RTN1-209ENST00000611068 SLC4A1APQ9BWU0 796 aaKnown RBP22.49■■□□□ 1.19
RTN1-209ENST00000611068 SAMD9LQ8IVG5 1584 aa22.48■■□□□ 1.19
RTN1-209ENST00000611068 GCC2Q8IWJ2 1684 aa22.48■■□□□ 1.19
RTN1-209ENST00000611068 C9orf84Q5VXU9 1444 aa22.48■■□□□ 1.19
RTN1-209ENST00000611068 ANKRD30AQ9BXX3 1397 aa22.47■■□□□ 1.19
RTN1-209ENST00000611068 SALL2Q9Y467 1007 aaPredicted RBP22.46■■□□□ 1.19
RTN1-209ENST00000611068 SYCP2Q9BX26 1530 aa22.45■■□□□ 1.18
RTN1-209ENST00000611068 PREX2Q70Z35 1606 aa22.45■■□□□ 1.18
RTN1-209ENST00000611068 MBD5Q9P267 1494 aa22.45■■□□□ 1.18
RTN1-209ENST00000611068 EFCAB2Q5VUJ9 269 aa22.44■■□□□ 1.18
RTN1-209ENST00000611068 ASXL2Q76L83 1435 aa22.44■■□□□ 1.18
RTN1-209ENST00000611068 DENND4BO75064 1496 aaPredicted RBP22.44■■□□□ 1.18
RTN1-209ENST00000611068 HIRIP3Q9BW71 556 aaPredicted RBP22.43■■□□□ 1.18
RTN1-209ENST00000611068 AFAP1Q8N556 730 aa22.42■■□□□ 1.18
RTN1-209ENST00000611068 WDR7Q9Y4E6 1490 aa22.42■■□□□ 1.18
RTN1-209ENST00000611068 DEKP35659 375 aaKnown RBP22.42■■□□□ 1.18
RTN1-209ENST00000611068 FKBP8Q14318 412 aa22.41■■□□□ 1.18
RTN1-209ENST00000611068 PLCH2O75038 1416 aa22.4■■□□□ 1.18
RTN1-209ENST00000611068 ANKRD50Q9ULJ7 1429 aa22.4■■□□□ 1.18
RTN1-209ENST00000611068 KIF15Q9NS87 1388 aa22.4■■□□□ 1.18
RTN1-209ENST00000611068 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.4■■□□□ 1.18
RTN1-209ENST00000611068 MYT1LQ9UL68 1186 aa22.4■■□□□ 1.18
RTN1-209ENST00000611068 TONSLQ96HA7 1378 aa22.4■■□□□ 1.18
RTN1-209ENST00000611068 ARHGEF12Q9NZN5 1544 aa22.4■■□□□ 1.18
RTN1-209ENST00000611068 MYO5CQ9NQX4 1742 aa22.39■■□□□ 1.18
RTN1-209ENST00000611068 CCDC136Q96JN2 1154 aa22.39■■□□□ 1.17
RTN1-209ENST00000611068 CROCC2H7BZ55 1655 aa22.38■■□□□ 1.17
RTN1-209ENST00000611068 CCDC141Q6ZP82 1450 aa22.37■■□□□ 1.17
RTN1-209ENST00000611068 PPP1R15AO75807 674 aaPredicted RBP22.35■■□□□ 1.17
RTN1-209ENST00000611068 PKD2Q13563 968 aa22.35■■□□□ 1.17
RTN1-209ENST00000611068 ADGBQ8N7X0 1667 aa22.35■■□□□ 1.17
RTN1-209ENST00000611068 ADGRL2O95490 1459 aa22.34■■□□□ 1.17
RTN1-209ENST00000611068 NUP155O75694 1391 aa22.34■■□□□ 1.17
RTN1-209ENST00000611068 TRAPPC8Q9Y2L5 1435 aa22.34■■□□□ 1.17
RTN1-209ENST00000611068 RSPH4AQ5TD94 716 aa22.31■■□□□ 1.16
RTN1-209ENST00000611068 ARHGEF5Q12774 1597 aa22.29■■□□□ 1.16
RTN1-209ENST00000611068 PZPP20742 1482 aa22.29■■□□□ 1.16
RTN1-209ENST00000611068 SHANK2Q9UPX8 1470 aa22.29■■□□□ 1.16
RTN1-209ENST00000611068 FANCAO15360 1455 aa22.28■■□□□ 1.16
RTN1-209ENST00000611068 L3MBTL2Q969R5 705 aa22.26■■□□□ 1.15
RTN1-209ENST00000611068 SPAG9O60271 1321 aaKnown RBP22.26■■□□□ 1.15
RTN1-209ENST00000611068 KIAA1107Q9UPP5 1409 aa22.25■■□□□ 1.15
RTN1-209ENST00000611068 ANKRD30BQ9BXX2 1392 aa22.24■■□□□ 1.15
RTN1-209ENST00000611068 UBE2Q2Q8WVN8 375 aa22.24■■□□□ 1.15
RTN1-209ENST00000611068 PLEKHH2Q8IVE3 1493 aa22.22■■□□□ 1.15
RTN1-209ENST00000611068 TIMELESSQ9UNS1 1208 aa22.22■■□□□ 1.15
RTN1-209ENST00000611068 SCAPERQ9BY12 1400 aa22.22■■□□□ 1.15
RTN1-209ENST00000611068 ABCC1P33527 1531 aa22.21■■□□□ 1.15
RTN1-209ENST00000611068 RIMBP3CA6NJZ7 1639 aa22.21■■□□□ 1.15
RTN1-209ENST00000611068 RIMBP3BA6NNM3 1639 aa22.21■■□□□ 1.15
RTN1-209ENST00000611068 RIMBP3Q9UFD9 1639 aa22.21■■□□□ 1.15
RTN1-209ENST00000611068 FANCIQ9NVI1 1328 aa22.21■■□□□ 1.15
RTN1-209ENST00000611068 CD109Q6YHK3 1445 aa22.2■■□□□ 1.14
RTN1-209ENST00000611068 ZNF326Q5BKZ1 582 aaKnown RBP22.2■■□□□ 1.14
RTN1-209ENST00000611068 ADGRL1O94910 1474 aa22.19■■□□□ 1.14
RTN1-209ENST00000611068 ABCA9Q8IUA7 1624 aa22.18■■□□□ 1.14
RTN1-209ENST00000611068 RAPGEF3O95398 923 aa22.15■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms