RNA–Protein interactions for RNA: ENST00000609293.1

LINC01990-201, Transcript of long intergenic non-protein coding RNA 1990, humanhuman

TSL 1 (best) BASIC

Gene LINC01990, Length 1,487 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01990-201ENST00000609293 SNPHO15079 494 aa14.65□□□□□ -0.06
LINC01990-201ENST00000609293 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.63□□□□□ -0.07
LINC01990-201ENST00000609293 PDCD7Q8N8D1 485 aaKnown RBP14.62□□□□□ -0.07
LINC01990-201ENST00000609293 SPNS2Q8IVW8 549 aa14.61□□□□□ -0.07
LINC01990-201ENST00000609293 FANCD2Q9BXW9 1451 aa14.61□□□□□ -0.07
LINC01990-201ENST00000609293 C3orf67Q6ZVT6 689 aa14.6□□□□□ -0.07
LINC01990-201ENST00000609293 ST18O60284 1047 aa14.58□□□□□ -0.08
LINC01990-201ENST00000609293 TMEM121BQ9BXQ6 578 aaPredicted RBP14.54□□□□□ -0.08
LINC01990-201ENST00000609293 CFTRP13569 1480 aa14.53□□□□□ -0.08
LINC01990-201ENST00000609293 CABP2Q9NPB3 220 aa14.52□□□□□ -0.08
LINC01990-201ENST00000609293 G3V3G9 751 aa14.5□□□□□ -0.09
LINC01990-201ENST00000609293 PRDM2Q13029 1718 aa14.5□□□□□ -0.09
LINC01990-201ENST00000609293 URB2Q14146 1524 aaKnown RBP14.5□□□□□ -0.09
LINC01990-201ENST00000609293 ILDR1Q86SU0 546 aaPredicted RBP14.5□□□□□ -0.09
LINC01990-201ENST00000609293 RIMBP3CA6NJZ7 1639 aa14.48□□□□□ -0.09
LINC01990-201ENST00000609293 RIMBP3BA6NNM3 1639 aa14.48□□□□□ -0.09
LINC01990-201ENST00000609293 RIMBP3Q9UFD9 1639 aa14.48□□□□□ -0.09
LINC01990-201ENST00000609293 TOP2AP11388 1531 aaKnown RBP14.45□□□□□ -0.1
LINC01990-201ENST00000609293 BOLA1Q9Y3E2 137 aa14.4□□□□□ -0.1
LINC01990-201ENST00000609293 RSF1Q96T23 1441 aaPredicted RBP14.39□□□□□ -0.11
LINC01990-201ENST00000609293 DPY19L2Q6NUT2 758 aa14.38□□□□□ -0.11
LINC01990-201ENST00000609293 ARHGEF11O15085 1522 aa14.37□□□□□ -0.11
LINC01990-201ENST00000609293 IFT140Q96RY7 1462 aa14.37□□□□□ -0.11
LINC01990-201ENST00000609293 ZNF608Q9ULD9 1512 aaPredicted RBP14.35□□□□□ -0.11
LINC01990-201ENST00000609293 RIOK3O14730 519 aaKnown RBP14.35□□□□□ -0.11
LINC01990-201ENST00000609293 EIF4G3O43432 1585 aaKnown RBP14.32□□□□□ -0.12
LINC01990-201ENST00000609293 EFCAB3Q8N7B9 438 aa14.32□□□□□ -0.12
LINC01990-201ENST00000609293 MARVELD3Q96A59 401 aa14.32□□□□□ -0.12
LINC01990-201ENST00000609293 CHD1O14646 1710 aa14.31□□□□□ -0.12
LINC01990-201ENST00000609293 VGFO15240 615 aaPredicted RBP14.31□□□□□ -0.12
LINC01990-201ENST00000609293 TOPBP1Q92547 1522 aa14.3□□□□□ -0.12
LINC01990-201ENST00000609293 EMP3P54852 163 aa14.3□□□□□ -0.12
LINC01990-201ENST00000609293 TAOK2Q9UL54 1235 aa14.29□□□□□ -0.12
LINC01990-201ENST00000609293 SOX12O15370 315 aa14.28□□□□□ -0.12
LINC01990-201ENST00000609293 ABCC8Q09428 1581 aa14.26□□□□□ -0.13
LINC01990-201ENST00000609293 CCDC88BA6NC98 1476 aa14.26□□□□□ -0.13
LINC01990-201ENST00000609293 DNMBPQ6XZF7 1577 aa14.25□□□□□ -0.13
LINC01990-201ENST00000609293 CYB5RLQ6IPT4 315 aa14.25□□□□□ -0.13
LINC01990-201ENST00000609293 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP14.23□□□□□ -0.13
LINC01990-201ENST00000609293 ZFP91Q96JP5 570 aaPredicted RBP14.23□□□□□ -0.13
LINC01990-201ENST00000609293 RNF25Q96BH1 459 aaPredicted RBP14.22□□□□□ -0.13
LINC01990-201ENST00000609293 TARBP1Q13395 1621 aaKnown RBP14.22□□□□□ -0.13
LINC01990-201ENST00000609293 DOK7Q18PE1 504 aa14.21□□□□□ -0.13
LINC01990-201ENST00000609293 ARAP1Q96P48 1450 aa14.2□□□□□ -0.14
LINC01990-201ENST00000609293 ZNF710Q8N1W2 664 aa14.2□□□□□ -0.14
LINC01990-201ENST00000609293 AQRO60306 1485 aaKnown RBP eCLIP14.18□□□□□ -0.14
LINC01990-201ENST00000609293 RIMBP2O15034 1052 aa14.17□□□□□ -0.14
LINC01990-201ENST00000609293 FAM205CA6NFA0 338 aa14.16□□□□□ -0.14
LINC01990-201ENST00000609293 HOXB3P14651 431 aaPredicted RBP14.16□□□□□ -0.14
LINC01990-201ENST00000609293 MICALL2Q8IY33 904 aa14.16□□□□□ -0.14
LINC01990-201ENST00000609293 HS3ST6Q96QI5 342 aa14.15□□□□□ -0.14
LINC01990-201ENST00000609293 POLA1P09884 1462 aaPredicted RBP14.13□□□□□ -0.15
LINC01990-201ENST00000609293 PHF8Q9UPP1 1060 aa14.12□□□□□ -0.15
LINC01990-201ENST00000609293 HOXB1P14653 301 aaPredicted RBP14.11□□□□□ -0.15
LINC01990-201ENST00000609293 NLRP6P59044 892 aa14.11□□□□□ -0.15
LINC01990-201ENST00000609293 MS4A4AQ96JQ5 239 aa14.08□□□□□ -0.16
LINC01990-201ENST00000609293 BCL11BQ9C0K0 894 aaPredicted RBP14.08□□□□□ -0.16
LINC01990-201ENST00000609293 RAD54L2Q9Y4B4 1467 aa14.08□□□□□ -0.16
LINC01990-201ENST00000609293 WDR97A6NE52 1622 aa14.07□□□□□ -0.16
LINC01990-201ENST00000609293 CLASP1Q7Z460 1538 aa14.07□□□□□ -0.16
LINC01990-201ENST00000609293 SYNJ1O43426 1573 aa14.07□□□□□ -0.16
LINC01990-201ENST00000609293 SNAPC4Q5SXM2 1469 aa14.06□□□□□ -0.16
LINC01990-201ENST00000609293 ECM2O94769 699 aaPredicted RBP14.06□□□□□ -0.16
LINC01990-201ENST00000609293 ZSWIM6Q9HCJ5 1215 aa14.06□□□□□ -0.16
LINC01990-201ENST00000609293 STK24Q9Y6E0 443 aa14.06□□□□□ -0.16
LINC01990-201ENST00000609293 SOGA1O94964 1423 aa14.05□□□□□ -0.16
LINC01990-201ENST00000609293 TDRD9Q8NDG6 1382 aaKnown RBP14.04□□□□□ -0.16
LINC01990-201ENST00000609293 ERBB3P21860 1342 aa14.04□□□□□ -0.16
LINC01990-201ENST00000609293 POTEB3A0JP26 581 aa14.04□□□□□ -0.16
LINC01990-201ENST00000609293 POTEBQ6S5H4 581 aa14.04□□□□□ -0.16
LINC01990-201ENST00000609293 KRTAP3-3Q9BYR6 98 aa14.02□□□□□ -0.16
LINC01990-201ENST00000609293 KRTAP3-2Q9BYR7 98 aa14.02□□□□□ -0.16
LINC01990-201ENST00000609293 MAGI1Q96QZ7 1491 aaPredicted RBP14.02□□□□□ -0.17
LINC01990-201ENST00000609293 FGD5Q6ZNL6 1462 aa14.01□□□□□ -0.17
LINC01990-201ENST00000609293 STK25O00506 426 aa14□□□□□ -0.17
LINC01990-201ENST00000609293 TMEM92Q6UXU6 159 aa14□□□□□ -0.17
LINC01990-201ENST00000609293 CHMP7Q8WUX9 453 aaPredicted RBP14□□□□□ -0.17
LINC01990-201ENST00000609293 PBRM1Q86U86 1689 aa13.99□□□□□ -0.17
LINC01990-201ENST00000609293 FBXO22Q8NEZ5 403 aa13.98□□□□□ -0.17
LINC01990-201ENST00000609293 GRIN2BQ13224 1484 aa13.97□□□□□ -0.17
LINC01990-201ENST00000609293 SYNJ2O15056 1496 aa13.97□□□□□ -0.17
LINC01990-201ENST00000609293 CUX1P39880 1505 aa13.95□□□□□ -0.18
LINC01990-201ENST00000609293 GAPVD1Q14C86 1478 aa13.93□□□□□ -0.18
LINC01990-201ENST00000609293 MFRPQ9BY79 579 aa13.93□□□□□ -0.18
LINC01990-201ENST00000609293 VARS2Q5ST30 1063 aaKnown RBP13.91□□□□□ -0.18
LINC01990-201ENST00000609293 GPR153Q6NV75 609 aa13.9□□□□□ -0.18
LINC01990-201ENST00000609293 PKD2Q13563 968 aa13.89□□□□□ -0.19
LINC01990-201ENST00000609293 ABCA5Q8WWZ7 1642 aa13.87□□□□□ -0.19
LINC01990-201ENST00000609293 RGL2O15211 777 aa13.87□□□□□ -0.19
LINC01990-201ENST00000609293 ZNF687Q8N1G0 1237 aa13.84□□□□□ -0.19
LINC01990-201ENST00000609293 ARSIQ5FYB1 569 aa13.83□□□□□ -0.2
LINC01990-201ENST00000609293 ABCA10Q8WWZ4 1543 aa13.83□□□□□ -0.2
LINC01990-201ENST00000609293 ERCC6L2Q5T890 1561 aa13.82□□□□□ -0.2
LINC01990-201ENST00000609293 GRIN2AQ12879 1464 aa13.8□□□□□ -0.2
LINC01990-201ENST00000609293 ADAMTS12P58397 1594 aa13.79□□□□□ -0.2
LINC01990-201ENST00000609293 CEP170Q5SW79 1584 aa13.79□□□□□ -0.2
LINC01990-201ENST00000609293 KIF3CO14782 793 aa13.79□□□□□ -0.2
LINC01990-201ENST00000609293 KIF13AQ9H1H9 1805 aa13.78□□□□□ -0.2
LINC01990-201ENST00000609293 C2orf72A6NCS6 295 aa13.78□□□□□ -0.2
LINC01990-201ENST00000609293 TMC2Q8TDI7 906 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms