RNA–Protein interactions for RNA: ENST00000608788.5

LINC01278-203, Transcript of long intergenic non-protein coding RNA 1278, humanhuman

TSL 5 BASIC

Gene LINC01278, Length 820 nt, Biotype sense overlapping, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01278-203ENST00000608788 EFCAB5A4FU69 1503 aa24.18■■□□□ 1.46
LINC01278-203ENST00000608788 MAGI2Q86UL8 1455 aa24.18■■□□□ 1.46
LINC01278-203ENST00000608788 CERKQ8TCT0 537 aa24.13■■□□□ 1.45
LINC01278-203ENST00000608788 HECW1Q76N89 1606 aa24.13■■□□□ 1.45
LINC01278-203ENST00000608788 FER1L4A9Z1Z3 1794 aa24.1■■□□□ 1.45
LINC01278-203ENST00000608788 ARHGEF12Q9NZN5 1544 aa24.09■■□□□ 1.45
LINC01278-203ENST00000608788 PLCH2O75038 1416 aa24.07■■□□□ 1.44
LINC01278-203ENST00000608788 SCAPERQ9BY12 1400 aa24.05■■□□□ 1.44
LINC01278-203ENST00000608788 CDK13Q14004 1512 aaKnown RBP24.05■■□□□ 1.44
LINC01278-203ENST00000608788 EEA1Q15075 1411 aa24.04■■□□□ 1.44
LINC01278-203ENST00000608788 POTEDQ86YR6 584 aa24.04■■□□□ 1.44
LINC01278-203ENST00000608788 ATP10AO60312 1499 aa24.03■■□□□ 1.44
LINC01278-203ENST00000608788 RANGAP1P46060 587 aaPredicted RBP24.03■■□□□ 1.44
LINC01278-203ENST00000608788 MLECQ14165 292 aa24.02■■□□□ 1.44
LINC01278-203ENST00000608788 PREX1Q8TCU6 1659 aa24.02■■□□□ 1.44
LINC01278-203ENST00000608788 C9orf84Q5VXU9 1444 aa24.01■■□□□ 1.43
LINC01278-203ENST00000608788 STRCQ7RTU9 1775 aa23.97■■□□□ 1.43
LINC01278-203ENST00000608788 CEBPAP49715 358 aaPredicted RBP23.93■■□□□ 1.42
LINC01278-203ENST00000608788 KDM5CP41229 1560 aa23.92■■□□□ 1.42
LINC01278-203ENST00000608788 MYO5CQ9NQX4 1742 aa23.92■■□□□ 1.42
LINC01278-203ENST00000608788 EFCAB2Q5VUJ9 269 aa23.91■■□□□ 1.42
LINC01278-203ENST00000608788 ZNF518AQ6AHZ1 1483 aa23.9■■□□□ 1.42
LINC01278-203ENST00000608788 ILDR2Q71H61 639 aa23.9■■□□□ 1.42
LINC01278-203ENST00000608788 SETD1BQ9UPS6 1966 aaKnown RBP23.88■■□□□ 1.41
LINC01278-203ENST00000608788 KIF14Q15058 1648 aa23.88■■□□□ 1.41
LINC01278-203ENST00000608788 REREQ9P2R6 1566 aa23.87■■□□□ 1.41
LINC01278-203ENST00000608788 DMRT2Q9Y5R5 561 aa23.87■■□□□ 1.41
LINC01278-203ENST00000608788 UHRF1BP1Q6BDS2 1440 aa23.86■■□□□ 1.41
LINC01278-203ENST00000608788 DIP2CQ9Y2E4 1556 aa23.85■■□□□ 1.41
LINC01278-203ENST00000608788 DISP3Q9P2K9 1392 aa23.84■■□□□ 1.41
LINC01278-203ENST00000608788 AFAP1Q8N556 730 aa23.83■■□□□ 1.41
LINC01278-203ENST00000608788 PTPRTO14522 1441 aa23.83■■□□□ 1.4
LINC01278-203ENST00000608788 FMN1Q68DA7 1419 aa23.83■■□□□ 1.4
LINC01278-203ENST00000608788 SOCS7O14512 581 aa23.82■■□□□ 1.4
LINC01278-203ENST00000608788 TROQ12816 1431 aaPredicted RBP23.81■■□□□ 1.4
LINC01278-203ENST00000608788 ARHGAP35Q9NRY4 1499 aa23.8■■□□□ 1.4
LINC01278-203ENST00000608788 MLH3Q9UHC1 1453 aa23.8■■□□□ 1.4
LINC01278-203ENST00000608788 C3P01024 1663 aa23.79■■□□□ 1.4
LINC01278-203ENST00000608788 ARHGAP5Q13017 1502 aa23.79■■□□□ 1.4
LINC01278-203ENST00000608788 ABCA6Q8N139 1617 aa23.79■■□□□ 1.4
LINC01278-203ENST00000608788 AGLP35573 1532 aa23.79■■□□□ 1.4
LINC01278-203ENST00000608788 LTBP4Q8N2S1 1624 aa23.78■■□□□ 1.4
LINC01278-203ENST00000608788 CDK11AQ9UQ88 783 aaPredicted RBP23.77■■□□□ 1.4
LINC01278-203ENST00000608788 LRRIQ1Q96JM4 1722 aa23.74■■□□□ 1.39
LINC01278-203ENST00000608788 CDC42BPBQ9Y5S2 1711 aa23.74■■□□□ 1.39
LINC01278-203ENST00000608788 SPATA31D1Q6ZQQ2 1576 aa23.73■■□□□ 1.39
LINC01278-203ENST00000608788 TRAPPC8Q9Y2L5 1435 aa23.72■■□□□ 1.39
LINC01278-203ENST00000608788 IQSEC2Q5JU85 1478 aa23.72■■□□□ 1.39
LINC01278-203ENST00000608788 ABCC1P33527 1531 aa23.71■■□□□ 1.39
LINC01278-203ENST00000608788 CLIP1P30622 1438 aa23.71■■□□□ 1.39
LINC01278-203ENST00000608788 NCOA1Q15788 1441 aa23.71■■□□□ 1.39
LINC01278-203ENST00000608788 ATP1B4Q9UN42 357 aaPredicted RBP23.71■■□□□ 1.39
LINC01278-203ENST00000608788 PREX2Q70Z35 1606 aa23.69■■□□□ 1.38
LINC01278-203ENST00000608788 KIDINS220Q9ULH0 1771 aa23.67■■□□□ 1.38
LINC01278-203ENST00000608788 ITSN2Q9NZM3 1697 aa23.66■■□□□ 1.38
LINC01278-203ENST00000608788 CNTLNQ9NXG0 1405 aa23.66■■□□□ 1.38
LINC01278-203ENST00000608788 MYT1LQ9UL68 1186 aa23.63■■□□□ 1.37
LINC01278-203ENST00000608788 NPATQ14207 1427 aa23.62■■□□□ 1.37
LINC01278-203ENST00000608788 UBTFP17480 764 aaKnown RBP23.62■■□□□ 1.37
LINC01278-203ENST00000608788 MROH2AA6NES4 1674 aa23.6■■□□□ 1.37
LINC01278-203ENST00000608788 CAMSAP1Q5T5Y3 1602 aa23.59■■□□□ 1.37
LINC01278-203ENST00000608788 ESF1Q9H501 851 aaKnown RBP23.58■■□□□ 1.37
LINC01278-203ENST00000608788 CDC42BPAQ5VT25 1732 aa23.57■■□□□ 1.36
LINC01278-203ENST00000608788 SAMD9LQ8IVG5 1584 aa23.57■■□□□ 1.36
LINC01278-203ENST00000608788 CCDC18Q5T9S5 1454 aa23.56■■□□□ 1.36
LINC01278-203ENST00000608788 EHMT2Q96KQ7 1210 aa23.55■■□□□ 1.36
LINC01278-203ENST00000608788 CASKIN1Q8WXD9 1431 aa23.55■■□□□ 1.36
LINC01278-203ENST00000608788 ZMYM3Q14202 1370 aa23.53■■□□□ 1.36
LINC01278-203ENST00000608788 ZNF142P52746 1687 aaPredicted RBP23.51■■□□□ 1.35
LINC01278-203ENST00000608788 PLA2R1Q13018 1463 aa23.5■■□□□ 1.35
LINC01278-203ENST00000608788 PLXNC1O60486 1568 aa23.5■■□□□ 1.35
LINC01278-203ENST00000608788 ZNF335Q9H4Z2 1342 aaPredicted RBP23.5■■□□□ 1.35
LINC01278-203ENST00000608788 NCKAP5LQ9HCH0 1330 aa23.49■■□□□ 1.35
LINC01278-203ENST00000608788 TCOF1Q13428 1488 aaKnown RBP23.49■■□□□ 1.35
LINC01278-203ENST00000608788 SYCP2Q9BX26 1530 aa23.48■■□□□ 1.35
LINC01278-203ENST00000608788 MYO3AQ8NEV4 1616 aa23.48■■□□□ 1.35
LINC01278-203ENST00000608788 PTPRKQ15262 1439 aa23.46■■□□□ 1.35
LINC01278-203ENST00000608788 GPATCH8Q9UKJ3 1502 aaKnown RBP23.46■■□□□ 1.35
LINC01278-203ENST00000608788 SUPT6HQ7KZ85 1726 aaKnown RBP23.45■■□□□ 1.34
LINC01278-203ENST00000608788 CLTCQ00610 1675 aaKnown RBP23.44■■□□□ 1.34
LINC01278-203ENST00000608788 INO80Q9ULG1 1556 aaPredicted RBP23.44■■□□□ 1.34
LINC01278-203ENST00000608788 CEP170BQ9Y4F5 1589 aaPredicted RBP23.44■■□□□ 1.34
LINC01278-203ENST00000608788 ATP7AQ04656 1500 aa23.44■■□□□ 1.34
LINC01278-203ENST00000608788 SPAG9O60271 1321 aaKnown RBP23.44■■□□□ 1.34
LINC01278-203ENST00000608788 KIAA1107Q9UPP5 1409 aa23.43■■□□□ 1.34
LINC01278-203ENST00000608788 PKD2Q13563 968 aa23.43■■□□□ 1.34
LINC01278-203ENST00000608788 FYCO1Q9BQS8 1478 aa23.43■■□□□ 1.34
LINC01278-203ENST00000608788 UBAP1LF5GYI3 381 aa23.41■■□□□ 1.34
LINC01278-203ENST00000608788 A2MP01023 1474 aa23.41■■□□□ 1.34
LINC01278-203ENST00000608788 HNRNPMP52272 730 aaKnown RBP eCLIP23.4■■□□□ 1.34
LINC01278-203ENST00000608788 SCAF1Q9H7N4 1312 aaKnown RBP23.39■■□□□ 1.34
LINC01278-203ENST00000608788 ZNF777Q9ULD5 760 aaPredicted RBP23.38■■□□□ 1.33
LINC01278-203ENST00000608788 PLEKHH2Q8IVE3 1493 aa23.36■■□□□ 1.33
LINC01278-203ENST00000608788 MAPK8IP2Q13387 824 aaPredicted RBP23.33■■□□□ 1.33
LINC01278-203ENST00000608788 A2ML1A8K2U0 1454 aa23.32■■□□□ 1.32
LINC01278-203ENST00000608788 DNMT1P26358 1616 aaKnown RBP23.32■■□□□ 1.32
LINC01278-203ENST00000608788 ADGBQ8N7X0 1667 aa23.3■■□□□ 1.32
LINC01278-203ENST00000608788 GGT6Q6P531 493 aa23.3■■□□□ 1.32
LINC01278-203ENST00000608788 CFDP1Q9UEE9 299 aaPredicted RBP23.3■■□□□ 1.32
LINC01278-203ENST00000608788 NEURL4Q96JN8 1562 aa23.28■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms