RNA–Protein interactions for RNA: ENST00000606715.3

SHANK2-219, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

Gene SHANK2, Length 5,738 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-219ENST00000606715 FTSJ3Q8IY81 847 aaKnown RBP14.33□□□□□ -0.12
SHANK2-219ENST00000606715 CLSTN1O94985 981 aa14.32□□□□□ -0.12
SHANK2-219ENST00000606715 CSB-PGBD3P0DP91 1061 aa14.32□□□□□ -0.12
SHANK2-219ENST00000606715 NEUROD2Q15784 382 aa14.32□□□□□ -0.12
SHANK2-219ENST00000606715 GRIN2BQ13224 1484 aa14.32□□□□□ -0.12
SHANK2-219ENST00000606715 EID1Q9Y6B2 187 aa14.31□□□□□ -0.12
SHANK2-219ENST00000606715 PKD2Q13563 968 aa14.31□□□□□ -0.12
SHANK2-219ENST00000606715 FHOD3Q2V2M9 1422 aa14.3□□□□□ -0.12
SHANK2-219ENST00000606715 TNNT2P45379 298 aaPredicted RBP14.3□□□□□ -0.12
SHANK2-219ENST00000606715 FGD1P98174 961 aa14.3□□□□□ -0.12
SHANK2-219ENST00000606715 HIRIP3Q9BW71 556 aaPredicted RBP14.29□□□□□ -0.12
SHANK2-219ENST00000606715 NUP155O75694 1391 aa14.29□□□□□ -0.12
SHANK2-219ENST00000606715 U2SURPO15042 1029 aaKnown RBP14.28□□□□□ -0.12
SHANK2-219ENST00000606715 PAK3O75914 559 aaPredicted RBP14.28□□□□□ -0.12
SHANK2-219ENST00000606715 CFTRP13569 1480 aa14.28□□□□□ -0.12
SHANK2-219ENST00000606715 NBR1Q14596 966 aa14.27□□□□□ -0.12
SHANK2-219ENST00000606715 SIN3AQ96ST3 1273 aa14.27□□□□□ -0.12
SHANK2-219ENST00000606715 SRPK2P78362 688 aaKnown RBP14.27□□□□□ -0.12
SHANK2-219ENST00000606715 KANK4Q5T7N3 995 aaPredicted RBP14.27□□□□□ -0.12
SHANK2-219ENST00000606715 NAP1L2Q9ULW6 460 aaPredicted RBP14.26□□□□□ -0.13
SHANK2-219ENST00000606715 KIF3BO15066 747 aa14.26□□□□□ -0.13
SHANK2-219ENST00000606715 CHMP4BQ9H444 224 aaKnown RBP14.26□□□□□ -0.13
SHANK2-219ENST00000606715 TPRNQ4KMQ1 711 aa14.25□□□□□ -0.13
SHANK2-219ENST00000606715 ZNF330Q9Y3S2 320 aaPredicted RBP14.25□□□□□ -0.13
SHANK2-219ENST00000606715 GOLGA6L22H0YM25 854 aa14.24□□□□□ -0.13
SHANK2-219ENST00000606715 KCNJ4P48050 445 aa14.24□□□□□ -0.13
SHANK2-219ENST00000606715 RAD54L2Q9Y4B4 1467 aa14.24□□□□□ -0.13
SHANK2-219ENST00000606715 WASHC2CQ9Y4E1 1318 aa14.23□□□□□ -0.13
SHANK2-219ENST00000606715 BECN1Q14457 450 aa14.23□□□□□ -0.13
SHANK2-219ENST00000606715 MPHOSPH9Q99550 1183 aa14.23□□□□□ -0.13
SHANK2-219ENST00000606715 SAFB2Q14151 953 aaKnown RBP eCLIP14.23□□□□□ -0.13
SHANK2-219ENST00000606715 EIF3AQ14152 1382 aaKnown RBP14.23□□□□□ -0.13
SHANK2-219ENST00000606715 HDGFL2Q7Z4V5 671 aaPredicted RBP14.23□□□□□ -0.13
SHANK2-219ENST00000606715 MS4A1P11836 297 aa14.21□□□□□ -0.13
SHANK2-219ENST00000606715 AQRO60306 1485 aaKnown RBP eCLIP14.21□□□□□ -0.13
SHANK2-219ENST00000606715 IGF1RP08069 1367 aa14.21□□□□□ -0.13
SHANK2-219ENST00000606715 HNRNPMP52272 730 aaKnown RBP eCLIP14.21□□□□□ -0.13
SHANK2-219ENST00000606715 RTF1Q92541 710 aaKnown RBP14.21□□□□□ -0.13
SHANK2-219ENST00000606715 G3V3G9 751 aa14.2□□□□□ -0.14
SHANK2-219ENST00000606715 FAM69CQ0P6D2 419 aa14.2□□□□□ -0.14
SHANK2-219ENST00000606715 DCAF8Q5TAQ9 597 aa14.2□□□□□ -0.14
SHANK2-219ENST00000606715 MIER1Q8N108 512 aa14.2□□□□□ -0.14
SHANK2-219ENST00000606715 STK26Q9P289 416 aa14.2□□□□□ -0.14
SHANK2-219ENST00000606715 LAMC3Q9Y6N6 1575 aa14.18□□□□□ -0.14
SHANK2-219ENST00000606715 RAB3GAP2Q9H2M9 1393 aa14.17□□□□□ -0.14
SHANK2-219ENST00000606715 UACAQ9BZF9 1416 aa14.16□□□□□ -0.14
SHANK2-219ENST00000606715 MORC1Q86VD1 984 aa14.16□□□□□ -0.14
SHANK2-219ENST00000606715 FRAT1Q92837 279 aaPredicted RBP14.15□□□□□ -0.14
SHANK2-219ENST00000606715 IRX6P78412 446 aaPredicted RBP14.15□□□□□ -0.14
SHANK2-219ENST00000606715 SENP3-EIF4A1A0A087X0R7 540 aa14.14□□□□□ -0.15
SHANK2-219ENST00000606715 ROCK2O75116 1388 aaKnown RBP14.14□□□□□ -0.15
SHANK2-219ENST00000606715 NESP48681 1621 aa14.14□□□□□ -0.15
SHANK2-219ENST00000606715 CHMP4AQ9BY43 222 aa14.14□□□□□ -0.15
SHANK2-219ENST00000606715 CC2D1BQ5T0F9 858 aaKnown RBP14.13□□□□□ -0.15
SHANK2-219ENST00000606715 TOPBP1Q92547 1522 aa14.12□□□□□ -0.15
SHANK2-219ENST00000606715 PTMAP06454 111 aaKnown RBP14.12□□□□□ -0.15
SHANK2-219ENST00000606715 DNMBPQ6XZF7 1577 aa14.11□□□□□ -0.15
SHANK2-219ENST00000606715 MEX3CQ5U5Q3 659 aaKnown RBP14.11□□□□□ -0.15
SHANK2-219ENST00000606715 TERF2IPQ9NYB0 399 aa14.11□□□□□ -0.15
SHANK2-219ENST00000606715 DDRGK1Q96HY6 314 aa14.1□□□□□ -0.15
SHANK2-219ENST00000606715 KTN1Q86UP2 1357 aaKnown RBP14.1□□□□□ -0.15
SHANK2-219ENST00000606715 PRG4Q92954 1404 aaPredicted RBP14.1□□□□□ -0.15
SHANK2-219ENST00000606715 SYNJ2O15056 1496 aa14.1□□□□□ -0.15
SHANK2-219ENST00000606715 DCAF8L1A6NGE4 600 aa14.1□□□□□ -0.15
SHANK2-219ENST00000606715 CALD1Q05682 793 aaKnown RBP14.09□□□□□ -0.15
SHANK2-219ENST00000606715 MSH5O43196 834 aa14.09□□□□□ -0.15
SHANK2-219ENST00000606715 HSPA5P11021 654 aaKnown RBP14.09□□□□□ -0.15
SHANK2-219ENST00000606715 BICRAQ9NZM4 1560 aa14.09□□□□□ -0.15
SHANK2-219ENST00000606715 TRIM44Q96DX7 344 aaPredicted RBP14.08□□□□□ -0.15
SHANK2-219ENST00000606715 MYOM3Q5VTT5 1437 aa14.08□□□□□ -0.16
SHANK2-219ENST00000606715 ANP32EQ9BTT0 268 aa14.08□□□□□ -0.16
SHANK2-219ENST00000606715 PHF23Q9BUL5 403 aaPredicted RBP14.08□□□□□ -0.16
SHANK2-219ENST00000606715 CCER2I3L3R5 266 aa14.08□□□□□ -0.16
SHANK2-219ENST00000606715 VGFO15240 615 aaPredicted RBP14.08□□□□□ -0.16
SHANK2-219ENST00000606715 GTF2E1P29083 439 aaPredicted RBP14.08□□□□□ -0.16
SHANK2-219ENST00000606715 GOLGA6L6A8MZA4 724 aa14.07□□□□□ -0.16
SHANK2-219ENST00000606715 RALBP1Q15311 655 aa14.07□□□□□ -0.16
SHANK2-219ENST00000606715 STAC3Q96MF2 364 aa14.07□□□□□ -0.16
SHANK2-219ENST00000606715 CCDC144AA2RUR9 1427 aa14.07□□□□□ -0.16
SHANK2-219ENST00000606715 RUSC2Q8N2Y8 1516 aa14.06□□□□□ -0.16
SHANK2-219ENST00000606715 GNL2Q13823 731 aaKnown RBP14.06□□□□□ -0.16
SHANK2-219ENST00000606715 CUX1P39880 1505 aa14.06□□□□□ -0.16
SHANK2-219ENST00000606715 TAF7LQ5H9L4 462 aa14.06□□□□□ -0.16
SHANK2-219ENST00000606715 SNAPC4Q5SXM2 1469 aa14.05□□□□□ -0.16
SHANK2-219ENST00000606715 FOXD1Q16676 465 aa14.05□□□□□ -0.16
SHANK2-219ENST00000606715 GOLGA6L4A6NEF3 574 aa14.04□□□□□ -0.16
SHANK2-219ENST00000606715 NGDNQ8NEJ9 315 aaKnown RBP14.04□□□□□ -0.16
SHANK2-219ENST00000606715 GORABQ5T7V8 394 aa14.04□□□□□ -0.16
SHANK2-219ENST00000606715 PLCB2Q00722 1185 aa14.04□□□□□ -0.16
SHANK2-219ENST00000606715 ABCF1Q8NE71 845 aaKnown RBP eCLIP14.04□□□□□ -0.16
SHANK2-219ENST00000606715 PRDM2Q13029 1718 aa14.03□□□□□ -0.16
SHANK2-219ENST00000606715 PRM3Q9NNZ6 103 aa14.03□□□□□ -0.16
SHANK2-219ENST00000606715 POLA1P09884 1462 aaPredicted RBP14.03□□□□□ -0.16
SHANK2-219ENST00000606715 CHMP3Q9Y3E7 222 aa14.03□□□□□ -0.16
SHANK2-219ENST00000606715 ERICH3Q5RHP9 1530 aa14.02□□□□□ -0.16
SHANK2-219ENST00000606715 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.02□□□□□ -0.17
SHANK2-219ENST00000606715 MCCP23508 829 aa14.01□□□□□ -0.17
SHANK2-219ENST00000606715 NRDCO43847 1150 aa14.01□□□□□ -0.17
SHANK2-219ENST00000606715 EVA1CP58658 441 aa14□□□□□ -0.17
SHANK2-219ENST00000606715 L3MBTL2Q969R5 705 aa14□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms