RNA–Protein interactions for RNA: ENST00000604030.6

SH3D19-211, Transcript of SH3 domain containing 19, humanhuman

TSL 5 BASIC

Gene SH3D19, Length 5,228 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3D19-211ENST00000604030 PLCB2Q00722 1185 aa26.79■■□□□ 1.88
SH3D19-211ENST00000604030 CALD1Q05682 793 aaKnown RBP26.79■■□□□ 1.88
SH3D19-211ENST00000604030 KCNJ4P48050 445 aa26.79■■□□□ 1.88
SH3D19-211ENST00000604030 PDE3BQ13370 1112 aa26.79■■□□□ 1.88
SH3D19-211ENST00000604030 FMN1Q68DA7 1419 aa26.78■■□□□ 1.88
SH3D19-211ENST00000604030 RWDD1Q9H446 243 aaPredicted RBP26.78■■□□□ 1.88
SH3D19-211ENST00000604030 RAB3GAP2Q9H2M9 1393 aa26.78■■□□□ 1.88
SH3D19-211ENST00000604030 ROCK2O75116 1388 aaKnown RBP26.76■■□□□ 1.87
SH3D19-211ENST00000604030 HDGFP51858 240 aaKnown RBP26.75■■□□□ 1.87
SH3D19-211ENST00000604030 CECR2Q9BXF3 1484 aa26.73■■□□□ 1.87
SH3D19-211ENST00000604030 PMFBP1Q8TBY8 1022 aa26.72■■□□□ 1.87
SH3D19-211ENST00000604030 TSHZ2Q9NRE2 1034 aa26.71■■□□□ 1.87
SH3D19-211ENST00000604030 IPO9Q96P70 1041 aaKnown RBP26.7■■□□□ 1.86
SH3D19-211ENST00000604030 PHLDB1Q86UU1 1377 aa26.7■■□□□ 1.86
SH3D19-211ENST00000604030 CHMP4AQ9BY43 222 aa26.69■■□□□ 1.86
SH3D19-211ENST00000604030 PKD2Q13563 968 aa26.69■■□□□ 1.86
SH3D19-211ENST00000604030 A0A0G2JS52 829 aa26.67■■□□□ 1.86
SH3D19-211ENST00000604030 EIF4G1Q04637 1599 aaKnown RBP26.66■■□□□ 1.86
SH3D19-211ENST00000604030 SYAP1Q96A49 352 aaPredicted RBP26.65■■□□□ 1.86
SH3D19-211ENST00000604030 MPHOSPH9Q99550 1183 aa26.65■■□□□ 1.86
SH3D19-211ENST00000604030 EIF3AQ14152 1382 aaKnown RBP26.65■■□□□ 1.86
SH3D19-211ENST00000604030 USP35Q9P2H5 1018 aa26.64■■□□□ 1.86
SH3D19-211ENST00000604030 ANKRD30AQ9BXX3 1397 aa26.64■■□□□ 1.86
SH3D19-211ENST00000604030 CCDC88BA6NC98 1476 aa26.63■■□□□ 1.85
SH3D19-211ENST00000604030 TPRNQ4KMQ1 711 aa26.62■■□□□ 1.85
SH3D19-211ENST00000604030 KANK4Q5T7N3 995 aaPredicted RBP26.62■■□□□ 1.85
SH3D19-211ENST00000604030 KIAA2012Q0VF49 1180 aa26.62■■□□□ 1.85
SH3D19-211ENST00000604030 HTATSF1O43719 755 aaKnown RBP26.62■■□□□ 1.85
SH3D19-211ENST00000604030 HDGFL2Q7Z4V5 671 aaPredicted RBP26.61■■□□□ 1.85
SH3D19-211ENST00000604030 CARMIL2Q6F5E8 1435 aa26.6■■□□□ 1.85
SH3D19-211ENST00000604030 SRPK2P78362 688 aaKnown RBP26.6■■□□□ 1.85
SH3D19-211ENST00000604030 NLRP13Q86W25 1043 aa26.6■■□□□ 1.85
SH3D19-211ENST00000604030 KIAA1211Q6ZU35 1233 aa26.58■■□□□ 1.84
SH3D19-211ENST00000604030 SMARCA2P51531 1590 aa26.57■■□□□ 1.84
SH3D19-211ENST00000604030 RTF1Q92541 710 aaKnown RBP26.56■■□□□ 1.84
SH3D19-211ENST00000604030 SENP3Q9H4L4 574 aaPredicted RBP26.56■■□□□ 1.84
SH3D19-211ENST00000604030 GOLGA6L3A6NEY3 463 aa26.55■■□□□ 1.84
SH3D19-211ENST00000604030 GOLGA2Q08379 1002 aa26.55■■□□□ 1.84
SH3D19-211ENST00000604030 DRC7Q8IY82 874 aa26.55■■□□□ 1.84
SH3D19-211ENST00000604030 HDAC5Q9UQL6 1122 aa26.52■■□□□ 1.84
SH3D19-211ENST00000604030 NUP155O75694 1391 aa26.52■■□□□ 1.84
SH3D19-211ENST00000604030 ERCC6Q03468 1493 aa26.51■■□□□ 1.83
SH3D19-211ENST00000604030 MROH2BQ7Z745 1585 aa26.51■■□□□ 1.83
SH3D19-211ENST00000604030 NAP1L2Q9ULW6 460 aaPredicted RBP26.51■■□□□ 1.83
SH3D19-211ENST00000604030 RSPH4AQ5TD94 716 aa26.5■■□□□ 1.83
SH3D19-211ENST00000604030 ABCC8Q09428 1581 aa26.49■■□□□ 1.83
SH3D19-211ENST00000604030 CSPP1Q1MSJ5 1256 aa26.48■■□□□ 1.83
SH3D19-211ENST00000604030 ITPRIPQ8IWB1 547 aa26.48■■□□□ 1.83
SH3D19-211ENST00000604030 KIF15Q9NS87 1388 aa26.48■■□□□ 1.83
SH3D19-211ENST00000604030 U2AF1L5P0DN76 240 aaPredicted RBP26.48■■□□□ 1.83
SH3D19-211ENST00000604030 U2AF1Q01081 240 aaKnown RBP eCLIP26.48■■□□□ 1.83
SH3D19-211ENST00000604030 PLEKHG5O94827 1062 aa26.46■■□□□ 1.83
SH3D19-211ENST00000604030 SPRYD3Q8NCJ5 442 aa26.46■■□□□ 1.83
SH3D19-211ENST00000604030 HMMRO75330 724 aa26.46■■□□□ 1.83
SH3D19-211ENST00000604030 TOP2AP11388 1531 aaKnown RBP26.45■■□□□ 1.82
SH3D19-211ENST00000604030 SLKQ9H2G2 1235 aaPredicted RBP26.44■■□□□ 1.82
SH3D19-211ENST00000604030 L3MBTL2Q969R5 705 aa26.42■■□□□ 1.82
SH3D19-211ENST00000604030 CENPJQ9HC77 1338 aaPredicted RBP26.42■■□□□ 1.82
SH3D19-211ENST00000604030 MYBBP1AQ9BQG0 1328 aaKnown RBP26.41■■□□□ 1.82
SH3D19-211ENST00000604030 EFCAB2Q5VUJ9 269 aa26.4■■□□□ 1.82
SH3D19-211ENST00000604030 CCDC18Q5T9S5 1454 aa26.4■■□□□ 1.82
SH3D19-211ENST00000604030 RAPGEF2Q9Y4G8 1499 aa26.4■■□□□ 1.82
SH3D19-211ENST00000604030 LMOD3Q0VAK6 560 aa26.4■■□□□ 1.82
SH3D19-211ENST00000604030 CENPQQ7L2Z9 268 aaPredicted RBP26.4■■□□□ 1.82
SH3D19-211ENST00000604030 DDX11L8A8MPP1 907 aa26.4■■□□□ 1.82
SH3D19-211ENST00000604030 TPM4P67936 248 aa26.4■■□□□ 1.82
SH3D19-211ENST00000604030 DHX57Q6P158 1386 aaKnown RBP26.39■■□□□ 1.81
SH3D19-211ENST00000604030 LMOD2Q6P5Q4 547 aa26.39■■□□□ 1.81
SH3D19-211ENST00000604030 PHF14O94880 888 aa26.38■■□□□ 1.81
SH3D19-211ENST00000604030 CCDC34Q96HJ3 373 aa26.37■■□□□ 1.81
SH3D19-211ENST00000604030 SMC4Q9NTJ3 1288 aa26.37■■□□□ 1.81
SH3D19-211ENST00000604030 ZBED9Q6R2W3 1325 aa26.36■■□□□ 1.81
SH3D19-211ENST00000604030 GNL2Q13823 731 aaKnown RBP26.36■■□□□ 1.81
SH3D19-211ENST00000604030 TERF2IPQ9NYB0 399 aa26.36■■□□□ 1.81
SH3D19-211ENST00000604030 FOXD1Q16676 465 aa26.36■■□□□ 1.81
SH3D19-211ENST00000604030 GPATCH3Q96I76 525 aa26.36■■□□□ 1.81
SH3D19-211ENST00000604030 FANCIQ9NVI1 1328 aa26.35■■□□□ 1.81
SH3D19-211ENST00000604030 PDS5BQ9NTI5 1447 aa26.35■■□□□ 1.81
SH3D19-211ENST00000604030 SPAG9O60271 1321 aaKnown RBP26.35■■□□□ 1.81
SH3D19-211ENST00000604030 MFAP1P55081 439 aaKnown RBP26.35■■□□□ 1.81
SH3D19-211ENST00000604030 NGEFQ8N5V2 710 aa26.35■■□□□ 1.81
SH3D19-211ENST00000604030 STK31Q9BXU1 1019 aa26.35■■□□□ 1.81
SH3D19-211ENST00000604030 GZF1Q9H116 711 aaPredicted RBP26.33■■□□□ 1.81
SH3D19-211ENST00000604030 FAM161AQ3B820 660 aa26.31■■□□□ 1.8
SH3D19-211ENST00000604030 ST18O60284 1047 aa26.31■■□□□ 1.8
SH3D19-211ENST00000604030 SKOR2Q2VWA4 1001 aaPredicted RBP26.31■■□□□ 1.8
SH3D19-211ENST00000604030 RSPH6AQ9H0K4 717 aa26.29■■□□□ 1.8
SH3D19-211ENST00000604030 NPHP1O15259 732 aa26.28■■□□□ 1.8
SH3D19-211ENST00000604030 CGNL1Q0VF96 1302 aa26.26■■□□□ 1.79
SH3D19-211ENST00000604030 KIF3AQ9Y496 699 aa26.25■■□□□ 1.79
SH3D19-211ENST00000604030 PDE4AP27815 886 aa26.24■■□□□ 1.79
SH3D19-211ENST00000604030 PRKRIP1Q9H875 184 aaPredicted RBP26.24■■□□□ 1.79
SH3D19-211ENST00000604030 APBB1O00213 710 aa26.24■■□□□ 1.79
SH3D19-211ENST00000604030 CHMP4CQ96CF2 233 aa26.24■■□□□ 1.79
SH3D19-211ENST00000604030 SAFB2Q14151 953 aaKnown RBP eCLIP26.23■■□□□ 1.79
SH3D19-211ENST00000604030 TAOK2Q9UL54 1235 aa26.23■■□□□ 1.79
SH3D19-211ENST00000604030 E9PSI1 815 aa26.22■■□□□ 1.79
SH3D19-211ENST00000604030 GGT6Q6P531 493 aa26.22■■□□□ 1.79
SH3D19-211ENST00000604030 UACAQ9BZF9 1416 aa26.22■■□□□ 1.79
SH3D19-211ENST00000604030 RRP1P56182 461 aaKnown RBP26.22■■□□□ 1.79
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms