RNA–Protein interactions for RNA: ENST00000602670.1

SFXN2-209, Transcript of sideroflexin 2, humanhuman

TSL 4

Gene SFXN2, Length 574 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN2-209ENST00000602670 PREX1Q8TCU6 1659 aa21.64■■□□□ 1.05
SFXN2-209ENST00000602670 CSRNP3Q8WYN3 585 aa21.62■■□□□ 1.05
SFXN2-209ENST00000602670 SOCS7O14512 581 aa21.61■■□□□ 1.05
SFXN2-209ENST00000602670 RANGAP1P46060 587 aaPredicted RBP21.6■■□□□ 1.05
SFXN2-209ENST00000602670 SCAPERQ9BY12 1400 aa21.6■■□□□ 1.05
SFXN2-209ENST00000602670 STRCQ7RTU9 1775 aa21.59■■□□□ 1.05
SFXN2-209ENST00000602670 C9orf84Q5VXU9 1444 aa21.58■■□□□ 1.05
SFXN2-209ENST00000602670 ATP10AO60312 1499 aa21.58■■□□□ 1.04
SFXN2-209ENST00000602670 PLCH2O75038 1416 aa21.56■■□□□ 1.04
SFXN2-209ENST00000602670 CDK13Q14004 1512 aaKnown RBP21.56■■□□□ 1.04
SFXN2-209ENST00000602670 CEBPAP49715 358 aaPredicted RBP21.55■■□□□ 1.04
SFXN2-209ENST00000602670 DMRT2Q9Y5R5 561 aa21.52■■□□□ 1.04
SFXN2-209ENST00000602670 SPATA31D1Q6ZQQ2 1576 aa21.52■■□□□ 1.04
SFXN2-209ENST00000602670 UHRF1BP1Q6BDS2 1440 aa21.5■■□□□ 1.03
SFXN2-209ENST00000602670 MYO5CQ9NQX4 1742 aa21.48■■□□□ 1.03
SFXN2-209ENST00000602670 SETD1BQ9UPS6 1966 aaKnown RBP21.47■■□□□ 1.03
SFXN2-209ENST00000602670 KDM5CP41229 1560 aa21.45■■□□□ 1.02
SFXN2-209ENST00000602670 PTPRTO14522 1441 aa21.45■■□□□ 1.02
SFXN2-209ENST00000602670 EEA1Q15075 1411 aa21.45■■□□□ 1.02
SFXN2-209ENST00000602670 ZNF518AQ6AHZ1 1483 aa21.45■■□□□ 1.02
SFXN2-209ENST00000602670 EFCAB2Q5VUJ9 269 aa21.44■■□□□ 1.02
SFXN2-209ENST00000602670 LTBP4Q8N2S1 1624 aa21.42■■□□□ 1.02
SFXN2-209ENST00000602670 DIP2CQ9Y2E4 1556 aa21.42■■□□□ 1.02
SFXN2-209ENST00000602670 C3P01024 1663 aa21.41■■□□□ 1.02
SFXN2-209ENST00000602670 KIF14Q15058 1648 aa21.41■■□□□ 1.02
SFXN2-209ENST00000602670 REREQ9P2R6 1566 aa21.41■■□□□ 1.02
SFXN2-209ENST00000602670 AFAP1Q8N556 730 aa21.39■■□□□ 1.01
SFXN2-209ENST00000602670 ABCA6Q8N139 1617 aa21.38■■□□□ 1.01
SFXN2-209ENST00000602670 ARHGAP5Q13017 1502 aa21.37■■□□□ 1.01
SFXN2-209ENST00000602670 IQSEC2Q5JU85 1478 aa21.37■■□□□ 1.01
SFXN2-209ENST00000602670 NCOA1Q15788 1441 aa21.34■■□□□ 1.01
SFXN2-209ENST00000602670 AGLP35573 1532 aa21.34■■□□□ 1.01
SFXN2-209ENST00000602670 MLH3Q9UHC1 1453 aa21.33■■□□□ 1.01
SFXN2-209ENST00000602670 TRAPPC8Q9Y2L5 1435 aa21.33■■□□□ 1.01
SFXN2-209ENST00000602670 TROQ12816 1431 aaPredicted RBP21.32■■□□□ 1
SFXN2-209ENST00000602670 FMN1Q68DA7 1419 aa21.31■■□□□ 1
SFXN2-209ENST00000602670 MYT1LQ9UL68 1186 aa21.31■■□□□ 1
SFXN2-209ENST00000602670 ATP1B4Q9UN42 357 aaPredicted RBP21.31■■□□□ 1
SFXN2-209ENST00000602670 CDK11AQ9UQ88 783 aaPredicted RBP21.31■■□□□ 1
SFXN2-209ENST00000602670 CDC42BPBQ9Y5S2 1711 aa21.29■■□□□ 1
SFXN2-209ENST00000602670 ABCC1P33527 1531 aa21.27■■□□□ 1
SFXN2-209ENST00000602670 CLIP1P30622 1438 aa21.27■■□□□ 1
SFXN2-209ENST00000602670 ARHGAP35Q9NRY4 1499 aa21.26■□□□□ 0.99
SFXN2-209ENST00000602670 LRRIQ1Q96JM4 1722 aa21.25■□□□□ 0.99
SFXN2-209ENST00000602670 ESF1Q9H501 851 aaKnown RBP21.25■□□□□ 0.99
SFXN2-209ENST00000602670 CNTLNQ9NXG0 1405 aa21.25■□□□□ 0.99
SFXN2-209ENST00000602670 CAMSAP1Q5T5Y3 1602 aa21.25■□□□□ 0.99
SFXN2-209ENST00000602670 ITSN2Q9NZM3 1697 aa21.24■□□□□ 0.99
SFXN2-209ENST00000602670 PREX2Q70Z35 1606 aa21.24■□□□□ 0.99
SFXN2-209ENST00000602670 KIDINS220Q9ULH0 1771 aa21.23■□□□□ 0.99
SFXN2-209ENST00000602670 MROH2AA6NES4 1674 aa21.21■□□□□ 0.99
SFXN2-209ENST00000602670 NPATQ14207 1427 aa21.21■□□□□ 0.99
SFXN2-209ENST00000602670 ZNF335Q9H4Z2 1342 aaPredicted RBP21.19■□□□□ 0.98
SFXN2-209ENST00000602670 NCKAP5LQ9HCH0 1330 aa21.16■□□□□ 0.98
SFXN2-209ENST00000602670 UBAP1LF5GYI3 381 aa21.16■□□□□ 0.98
SFXN2-209ENST00000602670 ZMYM3Q14202 1370 aa21.14■□□□□ 0.98
SFXN2-209ENST00000602670 UBTFP17480 764 aaKnown RBP21.14■□□□□ 0.97
SFXN2-209ENST00000602670 EHMT2Q96KQ7 1210 aa21.14■□□□□ 0.97
SFXN2-209ENST00000602670 ZNF142P52746 1687 aaPredicted RBP21.14■□□□□ 0.97
SFXN2-209ENST00000602670 SAMD9LQ8IVG5 1584 aa21.14■□□□□ 0.97
SFXN2-209ENST00000602670 MYO3AQ8NEV4 1616 aa21.13■□□□□ 0.97
SFXN2-209ENST00000602670 PLA2R1Q13018 1463 aa21.13■□□□□ 0.97
SFXN2-209ENST00000602670 CDC42BPAQ5VT25 1732 aa21.12■□□□□ 0.97
SFXN2-209ENST00000602670 TCOF1Q13428 1488 aaKnown RBP21.11■□□□□ 0.97
SFXN2-209ENST00000602670 SUPT6HQ7KZ85 1726 aaKnown RBP21.09■□□□□ 0.97
SFXN2-209ENST00000602670 CLTCQ00610 1675 aaKnown RBP21.09■□□□□ 0.97
SFXN2-209ENST00000602670 CEP170BQ9Y4F5 1589 aaPredicted RBP21.09■□□□□ 0.97
SFXN2-209ENST00000602670 PKD2Q13563 968 aa21.08■□□□□ 0.97
SFXN2-209ENST00000602670 CCDC18Q5T9S5 1454 aa21.07■□□□□ 0.96
SFXN2-209ENST00000602670 SYCP2Q9BX26 1530 aa21.07■□□□□ 0.96
SFXN2-209ENST00000602670 PLXNC1O60486 1568 aa21.06■□□□□ 0.96
SFXN2-209ENST00000602670 PTPRKQ15262 1439 aa21.06■□□□□ 0.96
SFXN2-209ENST00000602670 CASKIN1Q8WXD9 1431 aa21.04■□□□□ 0.96
SFXN2-209ENST00000602670 MED1Q15648 1581 aaPredicted RBP21.04■□□□□ 0.96
SFXN2-209ENST00000602670 ATP7AQ04656 1500 aa21.04■□□□□ 0.96
SFXN2-209ENST00000602670 SPAG9O60271 1321 aaKnown RBP21.04■□□□□ 0.96
SFXN2-209ENST00000602670 INO80Q9ULG1 1556 aaPredicted RBP21.02■□□□□ 0.96
SFXN2-209ENST00000602670 ZNF777Q9ULD5 760 aaPredicted RBP21.01■□□□□ 0.95
SFXN2-209ENST00000602670 PPP6R1Q9UPN7 881 aa21.01■□□□□ 0.95
SFXN2-209ENST00000602670 A2MP01023 1474 aa21.01■□□□□ 0.95
SFXN2-209ENST00000602670 GPATCH8Q9UKJ3 1502 aaKnown RBP20.99■□□□□ 0.95
SFXN2-209ENST00000602670 HSPA1LP34931 641 aa20.99■□□□□ 0.95
SFXN2-209ENST00000602670 HNRNPMP52272 730 aaKnown RBP eCLIP20.98■□□□□ 0.95
SFXN2-209ENST00000602670 KIAA1107Q9UPP5 1409 aa20.96■□□□□ 0.95
SFXN2-209ENST00000602670 A2ML1A8K2U0 1454 aa20.96■□□□□ 0.95
SFXN2-209ENST00000602670 DNMT1P26358 1616 aaKnown RBP20.96■□□□□ 0.95
SFXN2-209ENST00000602670 GGT6Q6P531 493 aa20.95■□□□□ 0.94
SFXN2-209ENST00000602670 SCAF1Q9H7N4 1312 aaKnown RBP20.94■□□□□ 0.94
SFXN2-209ENST00000602670 FYCO1Q9BQS8 1478 aa20.94■□□□□ 0.94
SFXN2-209ENST00000602670 CPS1P31327 1500 aa20.94■□□□□ 0.94
SFXN2-209ENST00000602670 NEURL4Q96JN8 1562 aa20.93■□□□□ 0.94
SFXN2-209ENST00000602670 POLR1AO95602 1720 aaPredicted RBP20.93■□□□□ 0.94
SFXN2-209ENST00000602670 PIP4K2BP78356 416 aa20.93■□□□□ 0.94
SFXN2-209ENST00000602670 PLEKHH2Q8IVE3 1493 aa20.93■□□□□ 0.94
SFXN2-209ENST00000602670 ADGBQ8N7X0 1667 aa20.91■□□□□ 0.94
SFXN2-209ENST00000602670 SHANK2Q9UPX8 1470 aa20.9■□□□□ 0.94
SFXN2-209ENST00000602670 TOM1O60784 492 aa20.9■□□□□ 0.94
SFXN2-209ENST00000602670 CFDP1Q9UEE9 299 aaPredicted RBP20.88■□□□□ 0.93
SFXN2-209ENST00000602670 ALKQ9UM73 1620 aa20.87■□□□□ 0.93
SFXN2-209ENST00000602670 VWDEQ8N2E2 1590 aa20.85■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms