RNA–Protein interactions for RNA: ENST00000602619.1

SGMS1-207, Transcript of sphingomyelin synthase 1, humanhuman

TSL 3

Gene SGMS1, Length 461 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS1-207ENST00000602619 ANKRD13DQ6ZTN6 518 aa8.91□□□□□ -0.98
SGMS1-207ENST00000602619 PHF8Q9UPP1 1060 aa8.91□□□□□ -0.98
SGMS1-207ENST00000602619 KHSRPQ92945 711 aaKnown RBP eCLIP8.9□□□□□ -0.987e-7■■■■□ 21.6
SGMS1-207ENST00000602619 PTGER2P43116 358 aa8.89□□□□□ -0.99
SGMS1-207ENST00000602619 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP8.88□□□□□ -0.99
SGMS1-207ENST00000602619 RNF25Q96BH1 459 aaPredicted RBP8.88□□□□□ -0.99
SGMS1-207ENST00000602619 ZFP91Q96JP5 570 aaPredicted RBP8.88□□□□□ -0.99
SGMS1-207ENST00000602619 ZNF316A6NFI3 1004 aaPredicted RBP8.87□□□□□ -0.99
SGMS1-207ENST00000602619 RIOK3O14730 519 aaKnown RBP8.87□□□□□ -0.99
SGMS1-207ENST00000602619 LSM11P83369 360 aaKnown RBP eCLIP8.84□□□□□ -0.99
SGMS1-207ENST00000602619 VGFO15240 615 aaPredicted RBP8.82□□□□□ -1
SGMS1-207ENST00000602619 POTEEQ6S8J3 1075 aa8.79□□□□□ -1
SGMS1-207ENST00000602619 FBXO22Q8NEZ5 403 aa8.79□□□□□ -1
SGMS1-207ENST00000602619 NLRP6P59044 892 aa8.78□□□□□ -1
SGMS1-207ENST00000602619 KIF3CO14782 793 aa8.77□□□□□ -1.01
SGMS1-207ENST00000602619 NUDT7P0C024 238 aa8.77□□□□□ -1.01
SGMS1-207ENST00000602619 AXIN2Q9Y2T1 843 aa8.77□□□□□ -1.01
SGMS1-207ENST00000602619 C2orf72A6NCS6 295 aa8.75□□□□□ -1.01
SGMS1-207ENST00000602619 LHX6Q9UPM6 363 aa8.75□□□□□ -1.01
SGMS1-207ENST00000602619 PBX2P40425 430 aa8.74□□□□□ -1.01
SGMS1-207ENST00000602619 PLA2G2EQ9NZK7 142 aa8.74□□□□□ -1.01
SGMS1-207ENST00000602619 MFRPQ9BY79 579 aa8.73□□□□□ -1.01
SGMS1-207ENST00000602619 BCL11BQ9C0K0 894 aaPredicted RBP8.73□□□□□ -1.01
SGMS1-207ENST00000602619 PCDHGA4Q9Y5G9 962 aa8.72□□□□□ -1.01
SGMS1-207ENST00000602619 SLC34A2O95436 690 aa8.7□□□□□ -1.02
SGMS1-207ENST00000602619 HCSTQ9UBK5 93 aa8.7□□□□□ -1.02
SGMS1-207ENST00000602619 STK24Q9Y6E0 443 aa8.69□□□□□ -1.02
SGMS1-207ENST00000602619 ADGRD1Q6QNK2 874 aa8.67□□□□□ -1.02
SGMS1-207ENST00000602619 ARHGAP33O14559 1287 aa8.66□□□□□ -1.02
SGMS1-207ENST00000602619 TAOK2Q9UL54 1235 aa8.64□□□□□ -1.03
SGMS1-207ENST00000602619 KDM4FA0A1W2PPD8 638 aa8.63□□□□□ -1.03
SGMS1-207ENST00000602619 STK25O00506 426 aa8.62□□□□□ -1.03
SGMS1-207ENST00000602619 TMC2Q8TDI7 906 aa8.62□□□□□ -1.03
SGMS1-207ENST00000602619 HRO43593 1189 aa8.61□□□□□ -1.03
SGMS1-207ENST00000602619 DMRTA1Q5VZB9 504 aa8.61□□□□□ -1.03
SGMS1-207ENST00000602619 PSEN2P49810 448 aa8.6□□□□□ -1.03
SGMS1-207ENST00000602619 TK2O00142 265 aa8.59□□□□□ -1.03
SGMS1-207ENST00000602619 PSDA5PKW4 1024 aaPredicted RBP8.58□□□□□ -1.04
SGMS1-207ENST00000602619 PPP1R37O75864 691 aa8.58□□□□□ -1.04
SGMS1-207ENST00000602619 PTCD2Q8WV60 388 aaKnown RBP8.56□□□□□ -1.04
SGMS1-207ENST00000602619 KCTD12Q96CX2 325 aaKnown RBP8.55□□□□□ -1.04
SGMS1-207ENST00000602619 ECM2O94769 699 aaPredicted RBP8.52□□□□□ -1.05
SGMS1-207ENST00000602619 FOXK1P85037 733 aa8.5□□□□□ -1.05
SGMS1-207ENST00000602619 PPP4R3BQ5MIZ7 849 aa8.5□□□□□ -1.05
SGMS1-207ENST00000602619 RGL2O15211 777 aa8.49□□□□□ -1.05
SGMS1-207ENST00000602619 PLPP6Q8IY26 295 aa8.49□□□□□ -1.05
SGMS1-207ENST00000602619 STAC3Q96MF2 364 aa8.49□□□□□ -1.05
SGMS1-207ENST00000602619 PTPN5P54829 565 aa8.47□□□□□ -1.05
SGMS1-207ENST00000602619 GPHNQ9NQX3 736 aaPredicted RBP8.47□□□□□ -1.05
SGMS1-207ENST00000602619 KCNK17Q96T54 332 aa8.46□□□□□ -1.06
SGMS1-207ENST00000602619 VPS9D1Q9Y2B5 631 aa8.46□□□□□ -1.06
SGMS1-207ENST00000602619 TBC1D12O60347 775 aa8.45□□□□□ -1.06
SGMS1-207ENST00000602619 PKD2Q13563 968 aa8.45□□□□□ -1.06
SGMS1-207ENST00000602619 DSG2Q14126 1118 aa8.45□□□□□ -1.06
SGMS1-207ENST00000602619 IFFO2Q5TF58 517 aa8.42□□□□□ -1.06
SGMS1-207ENST00000602619 RGS20O76081 388 aa8.41□□□□□ -1.06
SGMS1-207ENST00000602619 BHMG1C9JSJ3 638 aaPredicted RBP8.4□□□□□ -1.06
SGMS1-207ENST00000602619 KCNH8Q96L42 1107 aa8.4□□□□□ -1.06
SGMS1-207ENST00000602619 IRX2Q9BZI1 471 aaPredicted RBP8.39□□□□□ -1.07
SGMS1-207ENST00000602619 THSD4Q6ZMP0 1018 aa8.38□□□□□ -1.07
SGMS1-207ENST00000602619 OXER1Q8TDS5 423 aa8.38□□□□□ -1.07
SGMS1-207ENST00000602619 SLC4A5Q9BY07 1137 aa8.38□□□□□ -1.07
SGMS1-207ENST00000602619 ZNF454Q8N9F8 522 aa8.37□□□□□ -1.07
SGMS1-207ENST00000602619 BCL2L12Q9HB09 334 aa8.37□□□□□ -1.07
SGMS1-207ENST00000602619 A0A0G2JS52 829 aa8.35□□□□□ -1.07
SGMS1-207ENST00000602619 UPF1Q92900 1129 aaKnown RBP eCLIP8.35□□□□□ -1.07
SGMS1-207ENST00000602619 WNT2BQ93097 391 aa8.34□□□□□ -1.07
SGMS1-207ENST00000602619 ZBED2Q9BTP6 218 aa8.34□□□□□ -1.07
SGMS1-207ENST00000602619 GOLGA8CPA6NN73 597 aa8.32□□□□□ -1.08
SGMS1-207ENST00000602619 PTPREP23469 700 aa8.32□□□□□ -1.08
SGMS1-207ENST00000602619 FOSBP53539 338 aa8.32□□□□□ -1.08
SGMS1-207ENST00000602619 MRPL50Q8N5N7 158 aaKnown RBP8.31□□□□□ -1.08
SGMS1-207ENST00000602619 ANO8Q9HCE9 1232 aaPredicted RBP8.3□□□□□ -1.08
SGMS1-207ENST00000602619 HS6ST3Q8IZP7 471 aa8.28□□□□□ -1.08
SGMS1-207ENST00000602619 ADAM33Q9BZ11 813 aa8.27□□□□□ -1.09
SGMS1-207ENST00000602619 CRISPLD2Q9H0B8 497 aa8.27□□□□□ -1.09
SGMS1-207ENST00000602619 PPP1R15BQ5SWA1 713 aa8.26□□□□□ -1.09
SGMS1-207ENST00000602619 ZDHHC16Q969W1 377 aa8.26□□□□□ -1.09
SGMS1-207ENST00000602619 JPH4Q96JJ6 628 aa8.25□□□□□ -1.09
SGMS1-207ENST00000602619 EVI5O60447 810 aa8.24□□□□□ -1.09
SGMS1-207ENST00000602619 NBPF3Q9H094 633 aa8.24□□□□□ -1.09
SGMS1-207ENST00000602619 NKX1-1Q15270 411 aaPredicted RBP8.23□□□□□ -1.09
SGMS1-207ENST00000602619 ITGBL1O95965 494 aaPredicted RBP8.22□□□□□ -1.09
SGMS1-207ENST00000602619 NCKAP5LQ9HCH0 1330 aa8.22□□□□□ -1.09
SGMS1-207ENST00000602619 CHGAP10645 457 aaKnown RBP8.21□□□□□ -1.1
SGMS1-207ENST00000602619 Q6ZNB5 142 aa8.2□□□□□ -1.1
SGMS1-207ENST00000602619 RABGEF1Q9UJ41 708 aa8.2□□□□□ -1.1
SGMS1-207ENST00000602619 PDE4AP27815 886 aa8.19□□□□□ -1.1
SGMS1-207ENST00000602619 PROX2Q3B8N5 592 aa8.19□□□□□ -1.1
SGMS1-207ENST00000602619 COL9A1P20849 921 aa8.18□□□□□ -1.1
SGMS1-207ENST00000602619 BCAMP50895 628 aa8.18□□□□□ -1.1
SGMS1-207ENST00000602619 ANKK1Q8NFD2 765 aa8.18□□□□□ -1.1
SGMS1-207ENST00000602619 DNAJC5Q9H3Z4 198 aa8.18□□□□□ -1.1
SGMS1-207ENST00000602619 PPP1R3GB7ZBB8 358 aa8.17□□□□□ -1.1
SGMS1-207ENST00000602619 PCDHGA10Q9Y5H3 936 aa8.17□□□□□ -1.1
SGMS1-207ENST00000602619 MAP3K9P80192 1104 aa8.16□□□□□ -1.1
SGMS1-207ENST00000602619 SOWAHBA6NEL2 793 aa8.15□□□□□ -1.1
SGMS1-207ENST00000602619 LARP6Q9BRS8 491 aaKnown RBP8.14□□□□□ -1.11
SGMS1-207ENST00000602619 WBP1LQ9NX94 342 aa8.14□□□□□ -1.11
SGMS1-207ENST00000602619 LAPTM4BQ86VI4 370 aa8.13□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms