RNA–Protein interactions for RNA: ENST00000602540.5

PHLDA1-202, Transcript of pleckstrin homology like domain family A member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PHLDA1, Length 5,741 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHLDA1-202ENST00000602540 MSNP26038 577 aaKnown RBP23.77■■□□□ 1.39
PHLDA1-202ENST00000602540 HDGFL2Q7Z4V5 671 aaPredicted RBP23.76■■□□□ 1.39
PHLDA1-202ENST00000602540 KTN1Q86UP2 1357 aaKnown RBP23.76■■□□□ 1.39
PHLDA1-202ENST00000602540 NACADO15069 1562 aa23.75■■□□□ 1.39
PHLDA1-202ENST00000602540 MLECQ14165 292 aa23.75■■□□□ 1.39
PHLDA1-202ENST00000602540 SAFB2Q14151 953 aaKnown RBP eCLIP23.74■■□□□ 1.39
PHLDA1-202ENST00000602540 DRC7Q8IY82 874 aa23.74■■□□□ 1.39
PHLDA1-202ENST00000602540 CARMIL1Q5VZK9 1371 aa23.73■■□□□ 1.39
PHLDA1-202ENST00000602540 HSPA5P11021 654 aaKnown RBP23.73■■□□□ 1.39
PHLDA1-202ENST00000602540 CALD1Q05682 793 aaKnown RBP23.72■■□□□ 1.39
PHLDA1-202ENST00000602540 GNL2Q13823 731 aaKnown RBP23.71■■□□□ 1.39
PHLDA1-202ENST00000602540 SETD5Q9C0A6 1442 aa23.71■■□□□ 1.39
PHLDA1-202ENST00000602540 KIAA1211Q6ZU35 1233 aa23.71■■□□□ 1.39
PHLDA1-202ENST00000602540 SPRYD3Q8NCJ5 442 aa23.71■■□□□ 1.39
PHLDA1-202ENST00000602540 CLSTN1O94985 981 aa23.69■■□□□ 1.38
PHLDA1-202ENST00000602540 ARHGAP35Q9NRY4 1499 aa23.68■■□□□ 1.38
PHLDA1-202ENST00000602540 PTMSP20962 102 aa23.68■■□□□ 1.38
PHLDA1-202ENST00000602540 ISY1Q9ULR0 285 aaKnown RBP23.67■■□□□ 1.38
PHLDA1-202ENST00000602540 CUX2O14529 1486 aa23.67■■□□□ 1.38
PHLDA1-202ENST00000602540 PKD2Q13563 968 aa23.66■■□□□ 1.38
PHLDA1-202ENST00000602540 STK26Q9P289 416 aa23.66■■□□□ 1.38
PHLDA1-202ENST00000602540 GGT6Q6P531 493 aa23.65■■□□□ 1.38
PHLDA1-202ENST00000602540 RWDD1Q9H446 243 aaPredicted RBP23.64■■□□□ 1.38
PHLDA1-202ENST00000602540 APBB1O00213 710 aa23.64■■□□□ 1.37
PHLDA1-202ENST00000602540 GBP4Q96PP9 640 aa23.64■■□□□ 1.37
PHLDA1-202ENST00000602540 TRHP20396 242 aaPredicted RBP23.62■■□□□ 1.37
PHLDA1-202ENST00000602540 BAZ1AQ9NRL2 1556 aaPredicted RBP23.62■■□□□ 1.37
PHLDA1-202ENST00000602540 RALBP1Q15311 655 aa23.62■■□□□ 1.37
PHLDA1-202ENST00000602540 U2AF1L5P0DN76 240 aaPredicted RBP23.61■■□□□ 1.37
PHLDA1-202ENST00000602540 U2AF1Q01081 240 aaKnown RBP eCLIP23.61■■□□□ 1.37
PHLDA1-202ENST00000602540 ITPRIPQ8IWB1 547 aa23.6■■□□□ 1.37
PHLDA1-202ENST00000602540 CHMP4AQ9BY43 222 aa23.6■■□□□ 1.37
PHLDA1-202ENST00000602540 ROCK2O75116 1388 aaKnown RBP23.6■■□□□ 1.37
PHLDA1-202ENST00000602540 HTATSF1O43719 755 aaKnown RBP23.59■■□□□ 1.37
PHLDA1-202ENST00000602540 RCAN3Q9UKA8 241 aa23.59■■□□□ 1.37
PHLDA1-202ENST00000602540 PAK3O75914 559 aaPredicted RBP23.57■■□□□ 1.36
PHLDA1-202ENST00000602540 KIAA2012Q0VF49 1180 aa23.56■■□□□ 1.36
PHLDA1-202ENST00000602540 CSB-PGBD3P0DP91 1061 aa23.56■■□□□ 1.36
PHLDA1-202ENST00000602540 DEKP35659 375 aaKnown RBP23.55■■□□□ 1.36
PHLDA1-202ENST00000602540 CARMIL2Q6F5E8 1435 aa23.55■■□□□ 1.36
PHLDA1-202ENST00000602540 EIF3AQ14152 1382 aaKnown RBP23.55■■□□□ 1.36
PHLDA1-202ENST00000602540 PMFBP1Q8TBY8 1022 aa23.54■■□□□ 1.36
PHLDA1-202ENST00000602540 RBM19Q9Y4C8 960 aaKnown RBP23.54■■□□□ 1.36
PHLDA1-202ENST00000602540 TCERG1O14776 1098 aaKnown RBP23.53■■□□□ 1.36
PHLDA1-202ENST00000602540 STK31Q9BXU1 1019 aa23.52■■□□□ 1.36
PHLDA1-202ENST00000602540 SPAG9O60271 1321 aaKnown RBP23.52■■□□□ 1.36
PHLDA1-202ENST00000602540 SYAP1Q96A49 352 aaPredicted RBP23.52■■□□□ 1.36
PHLDA1-202ENST00000602540 VPS8Q8N3P4 1428 aa23.51■■□□□ 1.35
PHLDA1-202ENST00000602540 FOXD1Q16676 465 aa23.51■■□□□ 1.35
PHLDA1-202ENST00000602540 ZNF330Q9Y3S2 320 aaPredicted RBP23.51■■□□□ 1.35
PHLDA1-202ENST00000602540 GPATCH3Q96I76 525 aa23.5■■□□□ 1.35
PHLDA1-202ENST00000602540 HDAC5Q9UQL6 1122 aa23.5■■□□□ 1.35
PHLDA1-202ENST00000602540 SOGA1O94964 1423 aa23.5■■□□□ 1.35
PHLDA1-202ENST00000602540 MPHOSPH9Q99550 1183 aa23.49■■□□□ 1.35
PHLDA1-202ENST00000602540 NUP155O75694 1391 aa23.49■■□□□ 1.35
PHLDA1-202ENST00000602540 ANKRD30AQ9BXX3 1397 aa23.48■■□□□ 1.35
PHLDA1-202ENST00000602540 TPM4P67936 248 aa23.47■■□□□ 1.35
PHLDA1-202ENST00000602540 GORABQ5T7V8 394 aa23.47■■□□□ 1.35
PHLDA1-202ENST00000602540 NCBP3Q53F19 620 aaKnown RBP23.47■■□□□ 1.35
PHLDA1-202ENST00000602540 HMMRO75330 724 aa23.46■■□□□ 1.35
PHLDA1-202ENST00000602540 EFCAB2Q5VUJ9 269 aa23.46■■□□□ 1.35
PHLDA1-202ENST00000602540 TMX4Q9H1E5 349 aaPredicted RBP23.46■■□□□ 1.35
PHLDA1-202ENST00000602540 SMC4Q9NTJ3 1288 aa23.44■■□□□ 1.34
PHLDA1-202ENST00000602540 SLKQ9H2G2 1235 aaPredicted RBP23.44■■□□□ 1.34
PHLDA1-202ENST00000602540 TERF2IPQ9NYB0 399 aa23.44■■□□□ 1.34
PHLDA1-202ENST00000602540 CCDC34Q96HJ3 373 aa23.44■■□□□ 1.34
PHLDA1-202ENST00000602540 MFAP1P55081 439 aaKnown RBP23.42■■□□□ 1.34
PHLDA1-202ENST00000602540 TAF7LQ5H9L4 462 aa23.42■■□□□ 1.34
PHLDA1-202ENST00000602540 GZF1Q9H116 711 aaPredicted RBP23.42■■□□□ 1.34
PHLDA1-202ENST00000602540 FMN1Q68DA7 1419 aa23.41■■□□□ 1.34
PHLDA1-202ENST00000602540 CHMP3Q9Y3E7 222 aa23.41■■□□□ 1.34
PHLDA1-202ENST00000602540 TRIM6-TRIM34B2RNG4 842 aa23.4■■□□□ 1.34
PHLDA1-202ENST00000602540 HSP90B1P14625 803 aaKnown RBP23.4■■□□□ 1.34
PHLDA1-202ENST00000602540 RAB3GAP2Q9H2M9 1393 aa23.4■■□□□ 1.34
PHLDA1-202ENST00000602540 CSPP1Q1MSJ5 1256 aa23.4■■□□□ 1.34
PHLDA1-202ENST00000602540 NOC3LQ8WTT2 800 aaKnown RBP23.4■■□□□ 1.34
PHLDA1-202ENST00000602540 KANK4Q5T7N3 995 aaPredicted RBP23.39■■□□□ 1.34
PHLDA1-202ENST00000602540 LMOD3Q0VAK6 560 aa23.38■■□□□ 1.33
PHLDA1-202ENST00000602540 CENPJQ9HC77 1338 aaPredicted RBP23.34■■□□□ 1.33
PHLDA1-202ENST00000602540 GOLGA6L3A6NEY3 463 aa23.34■■□□□ 1.33
PHLDA1-202ENST00000602540 PDE3BQ13370 1112 aa23.34■■□□□ 1.33
PHLDA1-202ENST00000602540 SLC4A10Q6U841 1118 aa23.33■■□□□ 1.33
PHLDA1-202ENST00000602540 KIF3BO15066 747 aa23.33■■□□□ 1.33
PHLDA1-202ENST00000602540 EID1Q9Y6B2 187 aa23.32■■□□□ 1.32
PHLDA1-202ENST00000602540 NLRP13Q86W25 1043 aa23.32■■□□□ 1.32
PHLDA1-202ENST00000602540 CECR2Q9BXF3 1484 aa23.31■■□□□ 1.32
PHLDA1-202ENST00000602540 CCDC9Q9Y3X0 531 aaKnown RBP23.3■■□□□ 1.32
PHLDA1-202ENST00000602540 CCDC146Q8IYE0 955 aa23.3■■□□□ 1.32
PHLDA1-202ENST00000602540 NGDNQ8NEJ9 315 aaKnown RBP23.3■■□□□ 1.32
PHLDA1-202ENST00000602540 RASSF8Q8NHQ8 419 aa23.29■■□□□ 1.32
PHLDA1-202ENST00000602540 PHLDB1Q86UU1 1377 aa23.29■■□□□ 1.32
PHLDA1-202ENST00000602540 CLUAP1Q96AJ1 413 aa23.28■■□□□ 1.32
PHLDA1-202ENST00000602540 AMPHP49418 695 aa23.28■■□□□ 1.32
PHLDA1-202ENST00000602540 PDS5BQ9NTI5 1447 aa23.28■■□□□ 1.32
PHLDA1-202ENST00000602540 IPO9Q96P70 1041 aaKnown RBP23.27■■□□□ 1.32
PHLDA1-202ENST00000602540 RSPH4AQ5TD94 716 aa23.26■■□□□ 1.31
PHLDA1-202ENST00000602540 ST18O60284 1047 aa23.26■■□□□ 1.31
PHLDA1-202ENST00000602540 KIF3AQ9Y496 699 aa23.26■■□□□ 1.31
PHLDA1-202ENST00000602540 G3V3G9 751 aa23.25■■□□□ 1.31
PHLDA1-202ENST00000602540 DCAF8Q5TAQ9 597 aa23.25■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms