RNA–Protein interactions for RNA: ENST00000602272.5

FARP1-241, Transcript of FERM, ARH/RhoGEF and pleckstrin domain protein 1, humanhuman

TSL 5

Gene FARP1, Length 784 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FARP1-241ENST00000602272 EMP3P54852 163 aa13.43□□□□□ -0.26
FARP1-241ENST00000602272 DOK7Q18PE1 504 aa13.43□□□□□ -0.26
FARP1-241ENST00000602272 MS4A4AQ96JQ5 239 aa13.42□□□□□ -0.26
FARP1-241ENST00000602272 RGL2O15211 777 aa13.4□□□□□ -0.26
FARP1-241ENST00000602272 ZNF710Q8N1W2 664 aa13.4□□□□□ -0.26
FARP1-241ENST00000602272 RIMBP2O15034 1052 aa13.39□□□□□ -0.27
FARP1-241ENST00000602272 HOXB3P14651 431 aaPredicted RBP13.38□□□□□ -0.27
FARP1-241ENST00000602272 FBXO22Q8NEZ5 403 aa13.36□□□□□ -0.27
FARP1-241ENST00000602272 UNC13AQ9UPW8 1703 aa13.36□□□□□ -0.27
FARP1-241ENST00000602272 HOXB1P14653 301 aaPredicted RBP13.33□□□□□ -0.28
FARP1-241ENST00000602272 MFRPQ9BY79 579 aa13.32□□□□□ -0.28
FARP1-241ENST00000602272 FAM205CA6NFA0 338 aa13.31□□□□□ -0.28
FARP1-241ENST00000602272 ZSWIM6Q9HCJ5 1215 aa13.31□□□□□ -0.28
FARP1-241ENST00000602272 TMEM92Q6UXU6 159 aa13.3□□□□□ -0.28
FARP1-241ENST00000602272 HS3ST6Q96QI5 342 aa13.3□□□□□ -0.28
FARP1-241ENST00000602272 SCRIBQ14160 1630 aa13.26□□□□□ -0.29
FARP1-241ENST00000602272 ERBB3P21860 1342 aa13.22□□□□□ -0.29
FARP1-241ENST00000602272 BICRAQ9NZM4 1560 aa13.22□□□□□ -0.29
FARP1-241ENST00000602272 SPNS2Q8IVW8 549 aa13.21□□□□□ -0.29
FARP1-241ENST00000602272 POTEB3A0JP26 581 aa13.2□□□□□ -0.3
FARP1-241ENST00000602272 POTEBQ6S5H4 581 aa13.2□□□□□ -0.3
FARP1-241ENST00000602272 MMRN1Q13201 1228 aa13.16□□□□□ -0.3
FARP1-241ENST00000602272 GPR153Q6NV75 609 aa13.16□□□□□ -0.3
FARP1-241ENST00000602272 HS6ST3Q8IZP7 471 aa13.16□□□□□ -0.3
FARP1-241ENST00000602272 KRTAP3-3Q9BYR6 98 aa13.15□□□□□ -0.3
FARP1-241ENST00000602272 KRTAP3-2Q9BYR7 98 aa13.15□□□□□ -0.3
FARP1-241ENST00000602272 KIF3CO14782 793 aa13.14□□□□□ -0.31
FARP1-241ENST00000602272 CHGAP10645 457 aaKnown RBP13.13□□□□□ -0.31
FARP1-241ENST00000602272 TMC2Q8TDI7 906 aa13.12□□□□□ -0.31
FARP1-241ENST00000602272 C2orf72A6NCS6 295 aa13.11□□□□□ -0.31
FARP1-241ENST00000602272 VARS2Q5ST30 1063 aaKnown RBP13.11□□□□□ -0.31
FARP1-241ENST00000602272 SHROOM4Q9ULL8 1493 aa13.1□□□□□ -0.31
FARP1-241ENST00000602272 ARSIQ5FYB1 569 aa13.08□□□□□ -0.32
FARP1-241ENST00000602272 ZNF687Q8N1G0 1237 aa13.07□□□□□ -0.32
FARP1-241ENST00000602272 BBXQ8WY36 941 aaPredicted RBP13.06□□□□□ -0.32
FARP1-241ENST00000602272 RYDENQ9NUL5 291 aaKnown RBP13.06□□□□□ -0.32
FARP1-241ENST00000602272 PPP1R37O75864 691 aa13.05□□□□□ -0.32
FARP1-241ENST00000602272 SLC34A2O95436 690 aa13.05□□□□□ -0.32
FARP1-241ENST00000602272 DNAJC5Q9H3Z4 198 aa13.03□□□□□ -0.32
FARP1-241ENST00000602272 ZNF316A6NFI3 1004 aaPredicted RBP13.01□□□□□ -0.33
FARP1-241ENST00000602272 PLCB2Q00722 1185 aa12.98□□□□□ -0.33
FARP1-241ENST00000602272 PCDHGA4Q9Y5G9 962 aa12.97□□□□□ -0.33
FARP1-241ENST00000602272 KHSRPQ92945 711 aaKnown RBP eCLIP12.96□□□□□ -0.33
FARP1-241ENST00000602272 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.96□□□□□ -0.33
FARP1-241ENST00000602272 FOXK1P85037 733 aa12.94□□□□□ -0.34
FARP1-241ENST00000602272 NKX1-1Q15270 411 aaPredicted RBP12.94□□□□□ -0.34
FARP1-241ENST00000602272 GPHNQ9NQX3 736 aaPredicted RBP12.94□□□□□ -0.34
FARP1-241ENST00000602272 NUDT7P0C024 238 aa12.93□□□□□ -0.34
FARP1-241ENST00000602272 PTGER2P43116 358 aa12.92□□□□□ -0.34
FARP1-241ENST00000602272 SLC24A1O60721 1099 aa12.91□□□□□ -0.34
FARP1-241ENST00000602272 PSDA5PKW4 1024 aaPredicted RBP12.9□□□□□ -0.34
FARP1-241ENST00000602272 PBX2P40425 430 aa12.9□□□□□ -0.34
FARP1-241ENST00000602272 PAXIP1Q6ZW49 1069 aaPredicted RBP12.89□□□□□ -0.35
FARP1-241ENST00000602272 PTCD2Q8WV60 388 aaKnown RBP12.89□□□□□ -0.35
FARP1-241ENST00000602272 PLPP6Q8IY26 295 aa12.88□□□□□ -0.35
FARP1-241ENST00000602272 TBC1D12O60347 775 aa12.87□□□□□ -0.35
FARP1-241ENST00000602272 SPRYD3Q8NCJ5 442 aa12.87□□□□□ -0.35
FARP1-241ENST00000602272 LHX6Q9UPM6 363 aa12.87□□□□□ -0.35
FARP1-241ENST00000602272 CFAP44Q96MT7 982 aa12.86□□□□□ -0.35
FARP1-241ENST00000602272 RNF166Q96A37 237 aaPredicted RBP12.85□□□□□ -0.35
FARP1-241ENST00000602272 MYT1LQ9UL68 1186 aa12.85□□□□□ -0.35
FARP1-241ENST00000602272 EIF4G1Q04637 1599 aaKnown RBP12.85□□□□□ -0.35
FARP1-241ENST00000602272 ANKRD13DQ6ZTN6 518 aa12.84□□□□□ -0.35
FARP1-241ENST00000602272 LSM11P83369 360 aaKnown RBP eCLIP12.83□□□□□ -0.36
FARP1-241ENST00000602272 DSG2Q14126 1118 aa12.83□□□□□ -0.36
FARP1-241ENST00000602272 GTPBP6O43824 516 aaPredicted RBP12.82□□□□□ -0.36
FARP1-241ENST00000602272 KDM4FA0A1W2PPD8 638 aa12.78□□□□□ -0.36
FARP1-241ENST00000602272 PDE4AP27815 886 aa12.77□□□□□ -0.37
FARP1-241ENST00000602272 CRISPLD2Q9H0B8 497 aa12.77□□□□□ -0.37
FARP1-241ENST00000602272 CC2D2AQ9P2K1 1620 aa12.77□□□□□ -0.37
FARP1-241ENST00000602272 HAP1P54257 671 aaPredicted RBP12.76□□□□□ -0.37
FARP1-241ENST00000602272 ARHGAP33O14559 1287 aa12.75□□□□□ -0.37
FARP1-241ENST00000602272 PPP4R3BQ5MIZ7 849 aa12.73□□□□□ -0.37
FARP1-241ENST00000602272 CECR2Q9BXF3 1484 aa12.72□□□□□ -0.37
FARP1-241ENST00000602272 PPP1R15BQ5SWA1 713 aa12.72□□□□□ -0.37
FARP1-241ENST00000602272 OXER1Q8TDS5 423 aa12.71□□□□□ -0.37
FARP1-241ENST00000602272 AXIN2Q9Y2T1 843 aa12.71□□□□□ -0.37
FARP1-241ENST00000602272 SMARCA4P51532 1647 aa12.7□□□□□ -0.38
FARP1-241ENST00000602272 POTEEQ6S8J3 1075 aa12.7□□□□□ -0.38
FARP1-241ENST00000602272 BAZ1AQ9NRL2 1556 aaPredicted RBP12.69□□□□□ -0.38
FARP1-241ENST00000602272 KCNH8Q96L42 1107 aa12.69□□□□□ -0.38
FARP1-241ENST00000602272 TSHZ2Q9NRE2 1034 aa12.68□□□□□ -0.38
FARP1-241ENST00000602272 NCKAP5LQ9HCH0 1330 aa12.66□□□□□ -0.38
FARP1-241ENST00000602272 TK2O00142 265 aa12.66□□□□□ -0.38
FARP1-241ENST00000602272 ADGRD1Q6QNK2 874 aa12.65□□□□□ -0.38
FARP1-241ENST00000602272 UPF1Q92900 1129 aaKnown RBP eCLIP12.65□□□□□ -0.38
FARP1-241ENST00000602272 DDX27Q96GQ7 796 aaKnown RBP12.64□□□□□ -0.39
FARP1-241ENST00000602272 LARP6Q9BRS8 491 aaKnown RBP12.63□□□□□ -0.39
FARP1-241ENST00000602272 MROH2BQ7Z745 1585 aa12.62□□□□□ -0.39
FARP1-241ENST00000602272 MFSD10Q14728 455 aa12.59□□□□□ -0.39
FARP1-241ENST00000602272 PSEN2P49810 448 aa12.58□□□□□ -0.4
FARP1-241ENST00000602272 SMARCA2P51531 1590 aa12.58□□□□□ -0.4
FARP1-241ENST00000602272 PEG3Q9GZU2 1588 aa12.58□□□□□ -0.4
FARP1-241ENST00000602272 ATAD2BQ9ULI0 1458 aa12.58□□□□□ -0.4
FARP1-241ENST00000602272 VSIG10Q8N0Z9 540 aa12.57□□□□□ -0.4
FARP1-241ENST00000602272 ZNF454Q8N9F8 522 aa12.57□□□□□ -0.4
FARP1-241ENST00000602272 STAC3Q96MF2 364 aa12.57□□□□□ -0.4
FARP1-241ENST00000602272 ANO8Q9HCE9 1232 aaPredicted RBP12.57□□□□□ -0.4
FARP1-241ENST00000602272 KDM2AQ9Y2K7 1162 aa12.56□□□□□ -0.4
FARP1-241ENST00000602272 NCAPD3P42695 1498 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 78.3 ms