RNA–Protein interactions for RNA: ENST00000598249.5

SPTBN4-212, Transcript of spectrin beta, non-erythrocytic 4, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SPTBN4, Length 8,070 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN4-212ENST00000598249 SAFB2Q14151 953 aaKnown RBP eCLIP21.81■■□□□ 1.08
SPTBN4-212ENST00000598249 HDGFL2Q7Z4V5 671 aaPredicted RBP21.81■■□□□ 1.08
SPTBN4-212ENST00000598249 TMF1P82094 1093 aa21.8■■□□□ 1.08
SPTBN4-212ENST00000598249 STK26Q9P289 416 aa21.8■■□□□ 1.08
SPTBN4-212ENST00000598249 CC2D1BQ5T0F9 858 aaKnown RBP21.79■■□□□ 1.08
SPTBN4-212ENST00000598249 GGT6Q6P531 493 aa21.79■■□□□ 1.08
SPTBN4-212ENST00000598249 CHMP4AQ9BY43 222 aa21.79■■□□□ 1.08
SPTBN4-212ENST00000598249 KIAA1211Q6ZU35 1233 aa21.78■■□□□ 1.08
SPTBN4-212ENST00000598249 CFAP44Q96MT7 982 aa21.78■■□□□ 1.08
SPTBN4-212ENST00000598249 GORABQ5T7V8 394 aa21.77■■□□□ 1.08
SPTBN4-212ENST00000598249 CHMP3Q9Y3E7 222 aa21.75■■□□□ 1.07
SPTBN4-212ENST00000598249 MEX3CQ5U5Q3 659 aaKnown RBP21.75■■□□□ 1.07
SPTBN4-212ENST00000598249 GTF2E1P29083 439 aaPredicted RBP21.74■■□□□ 1.07
SPTBN4-212ENST00000598249 SENP3-EIF4A1A0A087X0R7 540 aa21.73■■□□□ 1.07
SPTBN4-212ENST00000598249 NOC3LQ8WTT2 800 aaKnown RBP21.73■■□□□ 1.07
SPTBN4-212ENST00000598249 MORC1Q86VD1 984 aa21.72■■□□□ 1.07
SPTBN4-212ENST00000598249 EEA1Q15075 1411 aa21.72■■□□□ 1.07
SPTBN4-212ENST00000598249 CALD1Q05682 793 aaKnown RBP21.72■■□□□ 1.07
SPTBN4-212ENST00000598249 SPAG9O60271 1321 aaKnown RBP21.71■■□□□ 1.07
SPTBN4-212ENST00000598249 GPATCH3Q96I76 525 aa21.7■■□□□ 1.06
SPTBN4-212ENST00000598249 CARMIL2Q6F5E8 1435 aa21.7■■□□□ 1.06
SPTBN4-212ENST00000598249 NOP58Q9Y2X3 529 aaKnown RBP21.7■■□□□ 1.06
SPTBN4-212ENST00000598249 CALRP27797 417 aaKnown RBP21.7■■□□□ 1.06
SPTBN4-212ENST00000598249 DRC7Q8IY82 874 aa21.7■■□□□ 1.06
SPTBN4-212ENST00000598249 DCAF11Q8TEB1 546 aa21.7■■□□□ 1.06
SPTBN4-212ENST00000598249 FHAD1B1AJZ9 1412 aa21.7■■□□□ 1.06
SPTBN4-212ENST00000598249 FRAT2O75474 233 aaPredicted RBP21.68■■□□□ 1.06
SPTBN4-212ENST00000598249 PHF23Q9BUL5 403 aaPredicted RBP21.68■■□□□ 1.06
SPTBN4-212ENST00000598249 EVA1CP58658 441 aa21.66■■□□□ 1.06
SPTBN4-212ENST00000598249 MSH5O43196 834 aa21.65■■□□□ 1.06
SPTBN4-212ENST00000598249 WRNQ14191 1432 aaPredicted RBP eCLIP21.65■■□□□ 1.06
SPTBN4-212ENST00000598249 DCAF1Q9Y4B6 1507 aa21.64■■□□□ 1.05
SPTBN4-212ENST00000598249 CCDC34Q96HJ3 373 aa21.64■■□□□ 1.05
SPTBN4-212ENST00000598249 RGS3P49796 1198 aa21.63■■□□□ 1.05
SPTBN4-212ENST00000598249 HDAC5Q9UQL6 1122 aa21.63■■□□□ 1.05
SPTBN4-212ENST00000598249 VPS53Q5VIR6 699 aa21.62■■□□□ 1.05
SPTBN4-212ENST00000598249 HSCBQ8IWL3 235 aa21.62■■□□□ 1.05
SPTBN4-212ENST00000598249 ARID3AQ99856 593 aa21.62■■□□□ 1.05
SPTBN4-212ENST00000598249 ZBTB4Q9P1Z0 1013 aaPredicted RBP21.62■■□□□ 1.05
SPTBN4-212ENST00000598249 IPO8O15397 1037 aaKnown RBP21.61■■□□□ 1.05
SPTBN4-212ENST00000598249 NGDNQ8NEJ9 315 aaKnown RBP21.6■■□□□ 1.05
SPTBN4-212ENST00000598249 CEP164Q9UPV0 1460 aa21.59■■□□□ 1.05
SPTBN4-212ENST00000598249 PRDM2Q13029 1718 aa21.58■■□□□ 1.05
SPTBN4-212ENST00000598249 USP35Q9P2H5 1018 aa21.56■■□□□ 1.04
SPTBN4-212ENST00000598249 TRIM34Q9BYJ4 488 aa21.56■■□□□ 1.04
SPTBN4-212ENST00000598249 TCEAL9Q9UHQ7 104 aa21.55■■□□□ 1.04
SPTBN4-212ENST00000598249 HTATSF1O43719 755 aaKnown RBP21.55■■□□□ 1.04
SPTBN4-212ENST00000598249 CNKSR2Q8WXI2 1034 aa21.55■■□□□ 1.04
SPTBN4-212ENST00000598249 DEKP35659 375 aaKnown RBP21.55■■□□□ 1.04
SPTBN4-212ENST00000598249 GOLGA6L1Q8N7Z2 621 aa21.55■■□□□ 1.04
SPTBN4-212ENST00000598249 RASSF8Q8NHQ8 419 aa21.54■■□□□ 1.04
SPTBN4-212ENST00000598249 STK31Q9BXU1 1019 aa21.54■■□□□ 1.04
SPTBN4-212ENST00000598249 MIER1Q8N108 512 aa21.54■■□□□ 1.04
SPTBN4-212ENST00000598249 CEP89Q96ST8 783 aa21.54■■□□□ 1.04
SPTBN4-212ENST00000598249 SETQ01105 290 aaPredicted RBP21.54■■□□□ 1.04
SPTBN4-212ENST00000598249 EIF3AQ14152 1382 aaKnown RBP21.53■■□□□ 1.04
SPTBN4-212ENST00000598249 MARCH6O60337 910 aa21.53■■□□□ 1.04
SPTBN4-212ENST00000598249 CTDP1Q9Y5B0 961 aaPredicted RBP21.53■■□□□ 1.04
SPTBN4-212ENST00000598249 APBB1O00213 710 aa21.52■■□□□ 1.04
SPTBN4-212ENST00000598249 AMPHP49418 695 aa21.52■■□□□ 1.04
SPTBN4-212ENST00000598249 CWC22Q9HCG8 908 aaKnown RBP21.51■■□□□ 1.03
SPTBN4-212ENST00000598249 CEP162Q5TB80 1403 aa21.51■■□□□ 1.03
SPTBN4-212ENST00000598249 PTMSP20962 102 aa21.5■■□□□ 1.03
SPTBN4-212ENST00000598249 TPM4P67936 248 aa21.5■■□□□ 1.03
SPTBN4-212ENST00000598249 SUPT16HQ9Y5B9 1047 aaKnown RBP21.5■■□□□ 1.03
SPTBN4-212ENST00000598249 BAZ1AQ9NRL2 1556 aaPredicted RBP21.49■■□□□ 1.03
SPTBN4-212ENST00000598249 SPRYD3Q8NCJ5 442 aa21.49■■□□□ 1.03
SPTBN4-212ENST00000598249 PDS5BQ9NTI5 1447 aa21.48■■□□□ 1.03
SPTBN4-212ENST00000598249 HSP90B1P14625 803 aaKnown RBP21.47■■□□□ 1.03
SPTBN4-212ENST00000598249 TERF2IPQ9NYB0 399 aa21.47■■□□□ 1.03
SPTBN4-212ENST00000598249 NOL10Q9BSC4 688 aaKnown RBP21.46■■□□□ 1.03
SPTBN4-212ENST00000598249 A0A0U1RQG5 324 aaPredicted RBP21.46■■□□□ 1.03
SPTBN4-212ENST00000598249 EFCAB2Q5VUJ9 269 aa21.45■■□□□ 1.02
SPTBN4-212ENST00000598249 AMOTL1Q8IY63 956 aa21.44■■□□□ 1.02
SPTBN4-212ENST00000598249 CUX2O14529 1486 aa21.44■■□□□ 1.02
SPTBN4-212ENST00000598249 KLHL34Q8N239 644 aa21.44■■□□□ 1.02
SPTBN4-212ENST00000598249 ROCK2O75116 1388 aaKnown RBP21.44■■□□□ 1.02
SPTBN4-212ENST00000598249 PDE4CQ08493 712 aa21.43■■□□□ 1.02
SPTBN4-212ENST00000598249 ARHGAP35Q9NRY4 1499 aa21.43■■□□□ 1.02
SPTBN4-212ENST00000598249 WASHC2CQ9Y4E1 1318 aa21.43■■□□□ 1.02
SPTBN4-212ENST00000598249 U2AF1L5P0DN76 240 aaPredicted RBP21.43■■□□□ 1.02
SPTBN4-212ENST00000598249 U2AF1Q01081 240 aaKnown RBP eCLIP21.43■■□□□ 1.02
SPTBN4-212ENST00000598249 TRIM6-TRIM34B2RNG4 842 aa21.42■■□□□ 1.02
SPTBN4-212ENST00000598249 LTV1Q96GA3 475 aaPredicted RBP21.41■■□□□ 1.02
SPTBN4-212ENST00000598249 C1orf141Q5JVX7 400 aa21.39■■□□□ 1.02
SPTBN4-212ENST00000598249 TOMM22Q9NS69 142 aa21.39■■□□□ 1.02
SPTBN4-212ENST00000598249 KTN1Q86UP2 1357 aaKnown RBP21.39■■□□□ 1.01
SPTBN4-212ENST00000598249 CREBRFQ8IUR6 639 aa21.38■■□□□ 1.01
SPTBN4-212ENST00000598249 HMMRO75330 724 aa21.37■■□□□ 1.01
SPTBN4-212ENST00000598249 SMARCA2P51531 1590 aa21.37■■□□□ 1.01
SPTBN4-212ENST00000598249 CARMIL1Q5VZK9 1371 aa21.36■■□□□ 1.01
SPTBN4-212ENST00000598249 ITPRIPQ8IWB1 547 aa21.36■■□□□ 1.01
SPTBN4-212ENST00000598249 LMOD3Q0VAK6 560 aa21.36■■□□□ 1.01
SPTBN4-212ENST00000598249 PPP4R2Q9NY27 417 aa21.35■■□□□ 1.01
SPTBN4-212ENST00000598249 FOXD1Q16676 465 aa21.34■■□□□ 1.01
SPTBN4-212ENST00000598249 KIF3BO15066 747 aa21.34■■□□□ 1.01
SPTBN4-212ENST00000598249 HSP90AA2PQ14568 343 aaPredicted RBP21.34■■□□□ 1.01
SPTBN4-212ENST00000598249 SLC4A10Q6U841 1118 aa21.33■■□□□ 1.01
SPTBN4-212ENST00000598249 VPS37DQ86XT2 251 aa21.33■■□□□ 1.01
SPTBN4-212ENST00000598249 SYAP1Q96A49 352 aaPredicted RBP21.33■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms