RNA–Protein interactions for RNA: ENST00000597716.1

CAPN12-207, Transcript of calpain 12, humanhuman

TSL 2

Gene CAPN12, Length 2,198 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN12-207ENST00000597716 MIER1Q8N108 512 aa28.23■■■□□ 2.11
CAPN12-207ENST00000597716 CHIC2Q9UKJ5 165 aa28.22■■■□□ 2.11
CAPN12-207ENST00000597716 CROCC2H7BZ55 1655 aa28.22■■■□□ 2.11
CAPN12-207ENST00000597716 ADGBQ8N7X0 1667 aa28.22■■■□□ 2.11
CAPN12-207ENST00000597716 ABCC10Q5T3U5 1492 aa28.2■■■□□ 2.1
CAPN12-207ENST00000597716 PTPRGP23470 1445 aa28.2■■■□□ 2.1
CAPN12-207ENST00000597716 CENPBP07199 599 aaPredicted RBP28.2■■■□□ 2.1
CAPN12-207ENST00000597716 CDC42BPAQ5VT25 1732 aa28.19■■■□□ 2.1
CAPN12-207ENST00000597716 PPP1R15AO75807 674 aaPredicted RBP28.18■■■□□ 2.1
CAPN12-207ENST00000597716 DENND4BO75064 1496 aaPredicted RBP28.18■■■□□ 2.1
CAPN12-207ENST00000597716 TONSLQ96HA7 1378 aa28.17■■■□□ 2.1
CAPN12-207ENST00000597716 ADGRL2O95490 1459 aa28.16■■■□□ 2.1
CAPN12-207ENST00000597716 PLEKHD1A6NEE1 506 aa28.16■■■□□ 2.1
CAPN12-207ENST00000597716 CFDP1Q9UEE9 299 aaPredicted RBP28.16■■■□□ 2.1
CAPN12-207ENST00000597716 ZNF644Q9H582 1327 aaPredicted RBP28.15■■■□□ 2.1
CAPN12-207ENST00000597716 KDM5BQ9UGL1 1544 aa28.09■■■□□ 2.09
CAPN12-207ENST00000597716 SHANK2Q9UPX8 1470 aa28.08■■■□□ 2.09
CAPN12-207ENST00000597716 CLASP1Q7Z460 1538 aa28.07■■■□□ 2.08
CAPN12-207ENST00000597716 NCOA1Q15788 1441 aa28.06■■■□□ 2.08
CAPN12-207ENST00000597716 TRIM52Q96A61 297 aa28.04■■■□□ 2.08
CAPN12-207ENST00000597716 MPHOSPH9Q99550 1183 aa28.04■■■□□ 2.08
CAPN12-207ENST00000597716 ABCC2Q92887 1545 aa28.02■■■□□ 2.08
CAPN12-207ENST00000597716 SCAF1Q9H7N4 1312 aaKnown RBP28.01■■■□□ 2.07
CAPN12-207ENST00000597716 PREX2Q70Z35 1606 aa28.01■■■□□ 2.07
CAPN12-207ENST00000597716 ARHGEF5Q12774 1597 aa28.01■■■□□ 2.07
CAPN12-207ENST00000597716 ANKRD30AQ9BXX3 1397 aa27.98■■■□□ 2.07
CAPN12-207ENST00000597716 ERCC6L2Q5T890 1561 aa27.97■■■□□ 2.07
CAPN12-207ENST00000597716 CDC42BPBQ9Y5S2 1711 aa27.95■■■□□ 2.06
CAPN12-207ENST00000597716 ANKRD30BQ9BXX2 1392 aa27.93■■■□□ 2.06
CAPN12-207ENST00000597716 ZNF777Q9ULD5 760 aaPredicted RBP27.93■■■□□ 2.06
CAPN12-207ENST00000597716 PZPP20742 1482 aa27.92■■■□□ 2.06
CAPN12-207ENST00000597716 C9orf84Q5VXU9 1444 aa27.91■■■□□ 2.06
CAPN12-207ENST00000597716 RPRD2Q5VT52 1461 aaKnown RBP27.91■■■□□ 2.06
CAPN12-207ENST00000597716 UHRF1BP1LA0JNW5 1464 aa27.91■■■□□ 2.06
CAPN12-207ENST00000597716 SAMD9LQ8IVG5 1584 aa27.9■■■□□ 2.06
CAPN12-207ENST00000597716 MBD5Q9P267 1494 aa27.88■■■□□ 2.05
CAPN12-207ENST00000597716 ANKRD50Q9ULJ7 1429 aa27.87■■■□□ 2.05
CAPN12-207ENST00000597716 TTC37Q6PGP7 1564 aa27.86■■■□□ 2.05
CAPN12-207ENST00000597716 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP27.85■■■□□ 2.05
CAPN12-207ENST00000597716 CCDC141Q6ZP82 1450 aa27.84■■■□□ 2.05
CAPN12-207ENST00000597716 KDM5DQ9BY66 1539 aa27.84■■■□□ 2.05
CAPN12-207ENST00000597716 YTHDC1Q96MU7 727 aaKnown RBP27.83■■■□□ 2.05
CAPN12-207ENST00000597716 SLC4A1APQ9BWU0 796 aaKnown RBP27.83■■■□□ 2.05
CAPN12-207ENST00000597716 MYO5CQ9NQX4 1742 aa27.83■■■□□ 2.05
CAPN12-207ENST00000597716 TEX14Q8IWB6 1497 aa27.82■■■□□ 2.04
CAPN12-207ENST00000597716 ZCCHC11Q5TAX3 1644 aaKnown RBP27.81■■■□□ 2.04
CAPN12-207ENST00000597716 RSPH4AQ5TD94 716 aa27.81■■■□□ 2.04
CAPN12-207ENST00000597716 MAST1Q9Y2H9 1570 aa27.81■■■□□ 2.04
CAPN12-207ENST00000597716 KIAA1107Q9UPP5 1409 aa27.79■■■□□ 2.04
CAPN12-207ENST00000597716 TSPY4P0CV99 314 aa27.78■■■□□ 2.04
CAPN12-207ENST00000597716 TSPY10P0CW01 314 aa27.78■■■□□ 2.04
CAPN12-207ENST00000597716 PLEKHH2Q8IVE3 1493 aa27.76■■■□□ 2.03
CAPN12-207ENST00000597716 OSCARQ8IYS5 282 aa27.76■■■□□ 2.03
CAPN12-207ENST00000597716 ARHGAP5Q13017 1502 aa27.76■■■□□ 2.03
CAPN12-207ENST00000597716 FOXD1Q16676 465 aa27.76■■■□□ 2.03
CAPN12-207ENST00000597716 L3MBTL2Q969R5 705 aa27.73■■■□□ 2.03
CAPN12-207ENST00000597716 KIF15Q9NS87 1388 aa27.73■■■□□ 2.03
CAPN12-207ENST00000597716 SYCP2Q9BX26 1530 aa27.73■■■□□ 2.03
CAPN12-207ENST00000597716 DDX10Q13206 875 aaKnown RBP27.72■■■□□ 2.03
CAPN12-207ENST00000597716 HNRNPMP52272 730 aaKnown RBP eCLIP27.7■■■□□ 2.03
CAPN12-207ENST00000597716 PLXNC1O60486 1568 aa27.69■■■□□ 2.02
CAPN12-207ENST00000597716 GTF3C3Q9Y5Q9 886 aa27.67■■■□□ 2.02
CAPN12-207ENST00000597716 HIRIP3Q9BW71 556 aaPredicted RBP27.66■■■□□ 2.02
CAPN12-207ENST00000597716 PLCH2O75038 1416 aa27.65■■■□□ 2.02
CAPN12-207ENST00000597716 ARAP3Q8WWN8 1544 aa27.64■■■□□ 2.01
CAPN12-207ENST00000597716 NUP155O75694 1391 aa27.64■■■□□ 2.01
CAPN12-207ENST00000597716 UNC13BO14795 1591 aa27.62■■■□□ 2.01
CAPN12-207ENST00000597716 PKD2Q13563 968 aa27.62■■■□□ 2.01
CAPN12-207ENST00000597716 EIF4G2P78344 907 aaKnown RBP eCLIP27.6■■■□□ 2.01
CAPN12-207ENST00000597716 HSPA5P11021 654 aaKnown RBP27.59■■■□□ 2.01
CAPN12-207ENST00000597716 ABCC1P33527 1531 aa27.58■■■□□ 2.01
CAPN12-207ENST00000597716 FAM135AQ9P2D6 1515 aa27.56■■■□□ 2
CAPN12-207ENST00000597716 ARHGEF12Q9NZN5 1544 aa27.55■■■□□ 2
CAPN12-207ENST00000597716 CCER2I3L3R5 266 aa27.55■■■□□ 2
CAPN12-207ENST00000597716 POLR1AO95602 1720 aaPredicted RBP27.54■■■□□ 2
CAPN12-207ENST00000597716 NBPF8Q3BBV2 869 aa27.54■■■□□ 2
CAPN12-207ENST00000597716 DUOX2Q9NRD8 1548 aa27.53■■■□□ 2
CAPN12-207ENST00000597716 ANP32CO43423 234 aa27.52■■■□□ 2
CAPN12-207ENST00000597716 SPATA31E1Q6ZUB1 1445 aa27.51■■□□□ 1.99
CAPN12-207ENST00000597716 WDR7Q9Y4E6 1490 aa27.51■■□□□ 1.99
CAPN12-207ENST00000597716 EFCAB2Q5VUJ9 269 aa27.5■■□□□ 1.99
CAPN12-207ENST00000597716 RIMBP3CA6NJZ7 1639 aa27.5■■□□□ 1.99
CAPN12-207ENST00000597716 RIMBP3BA6NNM3 1639 aa27.5■■□□□ 1.99
CAPN12-207ENST00000597716 IQGAP3Q86VI3 1631 aa27.5■■□□□ 1.99
CAPN12-207ENST00000597716 RIMBP3Q9UFD9 1639 aa27.5■■□□□ 1.99
CAPN12-207ENST00000597716 KCNH8Q96L42 1107 aa27.5■■□□□ 1.99
CAPN12-207ENST00000597716 UHRF1BP1Q6BDS2 1440 aa27.49■■□□□ 1.99
CAPN12-207ENST00000597716 ERBINQ96RT1 1412 aa27.49■■□□□ 1.99
CAPN12-207ENST00000597716 MAGI2Q86UL8 1455 aa27.49■■□□□ 1.99
CAPN12-207ENST00000597716 WASHC2AQ641Q2 1341 aa27.48■■□□□ 1.99
CAPN12-207ENST00000597716 ABCA9Q8IUA7 1624 aa27.46■■□□□ 1.99
CAPN12-207ENST00000597716 RTEL1-TNFRSF6BF6WH68 1400 aa27.42■■□□□ 1.98
CAPN12-207ENST00000597716 RALGAPBQ86X10 1494 aa27.41■■□□□ 1.98
CAPN12-207ENST00000597716 CNTLNQ9NXG0 1405 aa27.41■■□□□ 1.98
CAPN12-207ENST00000597716 CCDC7Q96M83 1385 aa27.4■■□□□ 1.98
CAPN12-207ENST00000597716 TRAPPC8Q9Y2L5 1435 aa27.38■■□□□ 1.97
CAPN12-207ENST00000597716 ZFYVE16Q7Z3T8 1539 aa27.37■■□□□ 1.97
CAPN12-207ENST00000597716 KDM5CP41229 1560 aa27.37■■□□□ 1.97
CAPN12-207ENST00000597716 ATP10AO60312 1499 aa27.35■■□□□ 1.97
CAPN12-207ENST00000597716 CCDC144AA2RUR9 1427 aa27.32■■□□□ 1.96
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms