RNA–Protein interactions for RNA: ENST00000597716.1

CAPN12-207, Transcript of calpain 12, humanhuman

TSL 2

Gene CAPN12, Length 2,198 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN12-207ENST00000597716 NISCHQ9Y2I1 1504 aa42.71■■■■■ 4.43
CAPN12-207ENST00000597716 CCDC180Q9P1Z9 1646 aa36.95■■■■□ 3.51
CAPN12-207ENST00000597716 ZCCHC6Q5VYS8 1495 aaKnown RBP36.06■■■■□ 3.36
CAPN12-207ENST00000597716 DCAF1Q9Y4B6 1507 aa35.37■■■■□ 3.25
CAPN12-207ENST00000597716 SHROOM4Q9ULL8 1493 aa35.26■■■■□ 3.24
CAPN12-207ENST00000597716 DCAF8L2P0C7V8 631 aa34.85■■■■□ 3.17
CAPN12-207ENST00000597716 MYO15BQ96JP2 1530 aa34.67■■■■□ 3.14
CAPN12-207ENST00000597716 SUPT5HO00267 1087 aaKnown RBP34.28■■■■□ 3.08
CAPN12-207ENST00000597716 NACADO15069 1562 aa34.2■■■■□ 3.06
CAPN12-207ENST00000597716 ABCC9O60706 1549 aa34.15■■■■□ 3.06
CAPN12-207ENST00000597716 SCRIBQ14160 1630 aa34.02■■■■□ 3.04
CAPN12-207ENST00000597716 RB1CC1Q8TDY2 1594 aa33.71■■■□□ 2.99
CAPN12-207ENST00000597716 RSF1Q96T23 1441 aaPredicted RBP33.41■■■□□ 2.94
CAPN12-207ENST00000597716 CHIC1Q5VXU3 224 aa33.27■■■□□ 2.92
CAPN12-207ENST00000597716 UNC13AQ9UPW8 1703 aa33.12■■■□□ 2.89
CAPN12-207ENST00000597716 CECR2Q9BXF3 1484 aa33.09■■■□□ 2.89
CAPN12-207ENST00000597716 MROH2BQ7Z745 1585 aa33.01■■■□□ 2.88
CAPN12-207ENST00000597716 BAZ1AQ9NRL2 1556 aaPredicted RBP32.93■■■□□ 2.86
CAPN12-207ENST00000597716 WIZO95785 1651 aa32.8■■■□□ 2.84
CAPN12-207ENST00000597716 BICRAQ9NZM4 1560 aa32.71■■■□□ 2.83
CAPN12-207ENST00000597716 SMARCA4P51532 1647 aa32.69■■■□□ 2.82
CAPN12-207ENST00000597716 TOP2AP11388 1531 aaKnown RBP32.49■■■□□ 2.79
CAPN12-207ENST00000597716 EIF4G1Q04637 1599 aaKnown RBP32.32■■■□□ 2.76
CAPN12-207ENST00000597716 PABPN1Q86U42 306 aaKnown RBP eCLIP32.31■■■□□ 2.763e-7■■■■□ 23
CAPN12-207ENST00000597716 PEG3Q9GZU2 1588 aa32.3■■■□□ 2.76
CAPN12-207ENST00000597716 SMARCA2P51531 1590 aa32.22■■■□□ 2.75
CAPN12-207ENST00000597716 TRIM41Q8WV44 630 aa32.2■■■□□ 2.75
CAPN12-207ENST00000597716 CCDC88BA6NC98 1476 aa32.14■■■□□ 2.74
CAPN12-207ENST00000597716 LOC105371045A0A1W2PR82 267 aa31.97■■■□□ 2.71
CAPN12-207ENST00000597716 ATAD2BQ9ULI0 1458 aa31.94■■■□□ 2.7
CAPN12-207ENST00000597716 BAZ1BQ9UIG0 1483 aaKnown RBP31.8■■■□□ 2.68
CAPN12-207ENST00000597716 ABCC8Q09428 1581 aa31.71■■■□□ 2.67
CAPN12-207ENST00000597716 HMGXB3Q12766 1538 aa31.6■■■□□ 2.65
CAPN12-207ENST00000597716 FAM9AQ8IZU1 332 aaPredicted RBP31.58■■■□□ 2.65
CAPN12-207ENST00000597716 NCAPD3P42695 1498 aa31.54■■■□□ 2.64
CAPN12-207ENST00000597716 WRNQ14191 1432 aaPredicted RBP eCLIP31.42■■■□□ 2.62
CAPN12-207ENST00000597716 EEA1Q15075 1411 aa31.4■■■□□ 2.62
CAPN12-207ENST00000597716 PCGF6Q9BYE7 350 aa31.31■■■□□ 2.6
CAPN12-207ENST00000597716 DNAJC5BQ9UF47 199 aa31.29■■■□□ 2.6
CAPN12-207ENST00000597716 SYNJ1O43426 1573 aa31.29■■■□□ 2.6
CAPN12-207ENST00000597716 SOGA1O94964 1423 aa31.24■■■□□ 2.59
CAPN12-207ENST00000597716 TRIM26Q12899 539 aaPredicted RBP31.17■■■□□ 2.58
CAPN12-207ENST00000597716 TOP2BQ02880 1626 aa31.12■■■□□ 2.57
CAPN12-207ENST00000597716 BIVM-ERCC5R4GMW8 1640 aa31.1■■■□□ 2.57
CAPN12-207ENST00000597716 RUSC2Q8N2Y8 1516 aa31.08■■■□□ 2.57
CAPN12-207ENST00000597716 HRCP23327 699 aa31.08■■■□□ 2.57
CAPN12-207ENST00000597716 CSRNP3Q8WYN3 585 aa31.07■■■□□ 2.56
CAPN12-207ENST00000597716 EHMT2Q96KQ7 1210 aa31.07■■■□□ 2.56
CAPN12-207ENST00000597716 CFTRP13569 1480 aa31.06■■■□□ 2.56
CAPN12-207ENST00000597716 PRDM2Q13029 1718 aa31.03■■■□□ 2.56
CAPN12-207ENST00000597716 TNIKQ9UKE5 1360 aa31.02■■■□□ 2.56
CAPN12-207ENST00000597716 GOLGA3Q08378 1498 aa30.98■■■□□ 2.55
CAPN12-207ENST00000597716 KIF21BO75037 1637 aa30.98■■■□□ 2.55
CAPN12-207ENST00000597716 CC2D2AQ9P2K1 1620 aa30.98■■■□□ 2.55
CAPN12-207ENST00000597716 CEP164Q9UPV0 1460 aa30.91■■■□□ 2.54
CAPN12-207ENST00000597716 CEP162Q5TB80 1403 aa30.9■■■□□ 2.54
CAPN12-207ENST00000597716 CUX1P39880 1505 aa30.83■■■□□ 2.53
CAPN12-207ENST00000597716 CADPSQ9ULU8 1353 aa30.76■■■□□ 2.51
CAPN12-207ENST00000597716 UBTFP17480 764 aaKnown RBP30.69■■■□□ 2.5
CAPN12-207ENST00000597716 ERICH3Q5RHP9 1530 aa30.63■■■□□ 2.49
CAPN12-207ENST00000597716 RAPGEF2Q9Y4G8 1499 aa30.6■■■□□ 2.49
CAPN12-207ENST00000597716 PRXQ9BXM0 1461 aa30.57■■■□□ 2.48
CAPN12-207ENST00000597716 KIF27Q86VH2 1401 aa30.55■■■□□ 2.48
CAPN12-207ENST00000597716 CLIP1P30622 1438 aa30.48■■■□□ 2.47
CAPN12-207ENST00000597716 FANCD2Q9BXW9 1451 aa30.44■■■□□ 2.46
CAPN12-207ENST00000597716 LAMC3Q9Y6N6 1575 aa30.37■■■□□ 2.45
CAPN12-207ENST00000597716 FGD5Q6ZNL6 1462 aa30.36■■■□□ 2.45
CAPN12-207ENST00000597716 PPARGC1BQ86YN6 1023 aaKnown RBP30.36■■■□□ 2.45
CAPN12-207ENST00000597716 VPS8Q8N3P4 1428 aa30.36■■■□□ 2.45
CAPN12-207ENST00000597716 DNMBPQ6XZF7 1577 aa30.34■■■□□ 2.45
CAPN12-207ENST00000597716 ZEB1P37275 1124 aaPredicted RBP30.34■■■□□ 2.45
CAPN12-207ENST00000597716 CUX2O14529 1486 aa30.29■■■□□ 2.44
CAPN12-207ENST00000597716 NESP48681 1621 aa30.24■■■□□ 2.43
CAPN12-207ENST00000597716 TOPBP1Q92547 1522 aa30.21■■■□□ 2.43
CAPN12-207ENST00000597716 IGF1RP08069 1367 aa30.18■■■□□ 2.42
CAPN12-207ENST00000597716 ABCA10Q8WWZ4 1543 aa30.14■■■□□ 2.41
CAPN12-207ENST00000597716 ARAP1Q96P48 1450 aa30.12■■■□□ 2.41
CAPN12-207ENST00000597716 POLA1P09884 1462 aaPredicted RBP30.12■■■□□ 2.41
CAPN12-207ENST00000597716 PDS5BQ9NTI5 1447 aa30.06■■■□□ 2.4
CAPN12-207ENST00000597716 CARMIL1Q5VZK9 1371 aa30.04■■■□□ 2.4
CAPN12-207ENST00000597716 URB2Q14146 1524 aaKnown RBP30.03■■■□□ 2.4
CAPN12-207ENST00000597716 WDR97A6NE52 1622 aa30.03■■■□□ 2.4
CAPN12-207ENST00000597716 RAD54L2Q9Y4B4 1467 aa29.99■■■□□ 2.39
CAPN12-207ENST00000597716 ARHGAP35Q9NRY4 1499 aa29.98■■■□□ 2.39
CAPN12-207ENST00000597716 CUL7Q14999 1698 aa29.97■■■□□ 2.39
CAPN12-207ENST00000597716 APLP2Q06481 763 aa29.97■■■□□ 2.39
CAPN12-207ENST00000597716 TTBK1Q5TCY1 1321 aaPredicted RBP29.96■■■□□ 2.39
CAPN12-207ENST00000597716 KIF21AQ7Z4S6 1674 aa29.94■■■□□ 2.38
CAPN12-207ENST00000597716 RANGAP1P46060 587 aaPredicted RBP29.91■■■□□ 2.38
CAPN12-207ENST00000597716 ABCA5Q8WWZ7 1642 aa29.86■■■□□ 2.37
CAPN12-207ENST00000597716 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP29.79■■■□□ 2.36
CAPN12-207ENST00000597716 CCER1Q8TC90 406 aaPredicted RBP29.77■■■□□ 2.36
CAPN12-207ENST00000597716 CTTNBP2Q8WZ74 1663 aa29.75■■■□□ 2.35
CAPN12-207ENST00000597716 MAP3K1Q13233 1512 aa29.73■■■□□ 2.35
CAPN12-207ENST00000597716 TARBP1Q13395 1621 aaKnown RBP29.72■■■□□ 2.35
CAPN12-207ENST00000597716 EFCAB5A4FU69 1503 aa29.71■■■□□ 2.35
CAPN12-207ENST00000597716 GAPVD1Q14C86 1478 aa29.69■■■□□ 2.34
CAPN12-207ENST00000597716 MRC2Q9UBG0 1479 aa29.66■■■□□ 2.34
CAPN12-207ENST00000597716 FHAD1B1AJZ9 1412 aa29.64■■■□□ 2.34
CAPN12-207ENST00000597716 TIAM1Q13009 1591 aa29.62■■■□□ 2.33
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms