RNA–Protein interactions for RNA: ENST00000597400.5

ZNF548-207, Transcript of zinc finger protein 548, humanhuman

TSL 3 BASIC

Gene ZNF548, Length 589 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF548-207ENST00000597400 CSRNP3Q8WYN3 585 aa18.63■□□□□ 0.57
ZNF548-207ENST00000597400 CERKQ8TCT0 537 aa18.62■□□□□ 0.57
ZNF548-207ENST00000597400 PLEKHD1A6NEE1 506 aa18.61■□□□□ 0.57
ZNF548-207ENST00000597400 MLECQ14165 292 aa18.6■□□□□ 0.57
ZNF548-207ENST00000597400 KIF14Q15058 1648 aa18.59■□□□□ 0.57
ZNF548-207ENST00000597400 SCAPERQ9BY12 1400 aa18.58■□□□□ 0.57
ZNF548-207ENST00000597400 LRRIQ1Q96JM4 1722 aa18.57■□□□□ 0.56
ZNF548-207ENST00000597400 PLCH2O75038 1416 aa18.57■□□□□ 0.56
ZNF548-207ENST00000597400 C9orf84Q5VXU9 1444 aa18.56■□□□□ 0.56
ZNF548-207ENST00000597400 ATP10AO60312 1499 aa18.55■□□□□ 0.56
ZNF548-207ENST00000597400 KDM5CP41229 1560 aa18.55■□□□□ 0.56
ZNF548-207ENST00000597400 C3P01024 1663 aa18.54■□□□□ 0.56
ZNF548-207ENST00000597400 ILDR2Q71H61 639 aa18.53■□□□□ 0.56
ZNF548-207ENST00000597400 DIP2CQ9Y2E4 1556 aa18.53■□□□□ 0.56
ZNF548-207ENST00000597400 ABCA6Q8N139 1617 aa18.52■□□□□ 0.55
ZNF548-207ENST00000597400 EEA1Q15075 1411 aa18.51■□□□□ 0.55
ZNF548-207ENST00000597400 CEBPAP49715 358 aaPredicted RBP18.51■□□□□ 0.55
ZNF548-207ENST00000597400 CDC42BPBQ9Y5S2 1711 aa18.5■□□□□ 0.55
ZNF548-207ENST00000597400 SETD1BQ9UPS6 1966 aaKnown RBP18.5■□□□□ 0.55
ZNF548-207ENST00000597400 SPATA31D1Q6ZQQ2 1576 aa18.48■□□□□ 0.55
ZNF548-207ENST00000597400 REREQ9P2R6 1566 aa18.48■□□□□ 0.55
ZNF548-207ENST00000597400 ZNF518AQ6AHZ1 1483 aa18.47■□□□□ 0.55
ZNF548-207ENST00000597400 DISP3Q9P2K9 1392 aa18.46■□□□□ 0.55
ZNF548-207ENST00000597400 UHRF1BP1Q6BDS2 1440 aa18.45■□□□□ 0.54
ZNF548-207ENST00000597400 ARHGAP5Q13017 1502 aa18.44■□□□□ 0.54
ZNF548-207ENST00000597400 LTBP4Q8N2S1 1624 aa18.44■□□□□ 0.54
ZNF548-207ENST00000597400 ITSN2Q9NZM3 1697 aa18.44■□□□□ 0.54
ZNF548-207ENST00000597400 PREX2Q70Z35 1606 aa18.42■□□□□ 0.54
ZNF548-207ENST00000597400 ARHGAP35Q9NRY4 1499 aa18.42■□□□□ 0.54
ZNF548-207ENST00000597400 KIDINS220Q9ULH0 1771 aa18.41■□□□□ 0.54
ZNF548-207ENST00000597400 ABCC1P33527 1531 aa18.4■□□□□ 0.54
ZNF548-207ENST00000597400 EFCAB2Q5VUJ9 269 aa18.4■□□□□ 0.54
ZNF548-207ENST00000597400 AFAP1Q8N556 730 aa18.39■□□□□ 0.53
ZNF548-207ENST00000597400 PTPRTO14522 1441 aa18.39■□□□□ 0.53
ZNF548-207ENST00000597400 TROQ12816 1431 aaPredicted RBP18.39■□□□□ 0.53
ZNF548-207ENST00000597400 SOCS7O14512 581 aa18.38■□□□□ 0.53
ZNF548-207ENST00000597400 FMN1Q68DA7 1419 aa18.38■□□□□ 0.53
ZNF548-207ENST00000597400 AGLP35573 1532 aa18.38■□□□□ 0.53
ZNF548-207ENST00000597400 CDC42BPAQ5VT25 1732 aa18.37■□□□□ 0.53
ZNF548-207ENST00000597400 MLH3Q9UHC1 1453 aa18.37■□□□□ 0.53
ZNF548-207ENST00000597400 TRAPPC8Q9Y2L5 1435 aa18.35■□□□□ 0.53
ZNF548-207ENST00000597400 MROH2AA6NES4 1674 aa18.34■□□□□ 0.53
ZNF548-207ENST00000597400 DMRT2Q9Y5R5 561 aa18.34■□□□□ 0.53
ZNF548-207ENST00000597400 NCOA1Q15788 1441 aa18.33■□□□□ 0.53
ZNF548-207ENST00000597400 ATP1B4Q9UN42 357 aaPredicted RBP18.33■□□□□ 0.52
ZNF548-207ENST00000597400 IQSEC2Q5JU85 1478 aa18.31■□□□□ 0.52
ZNF548-207ENST00000597400 CAMSAP1Q5T5Y3 1602 aa18.31■□□□□ 0.52
ZNF548-207ENST00000597400 EHMT2Q96KQ7 1210 aa18.3■□□□□ 0.52
ZNF548-207ENST00000597400 ZNF142P52746 1687 aaPredicted RBP18.3■□□□□ 0.52
ZNF548-207ENST00000597400 CLIP1P30622 1438 aa18.3■□□□□ 0.52
ZNF548-207ENST00000597400 SUPT6HQ7KZ85 1726 aaKnown RBP18.29■□□□□ 0.52
ZNF548-207ENST00000597400 MYO3AQ8NEV4 1616 aa18.28■□□□□ 0.52
ZNF548-207ENST00000597400 SAMD9LQ8IVG5 1584 aa18.28■□□□□ 0.52
ZNF548-207ENST00000597400 CLTCQ00610 1675 aaKnown RBP18.28■□□□□ 0.52
ZNF548-207ENST00000597400 MYT1LQ9UL68 1186 aa18.26■□□□□ 0.51
ZNF548-207ENST00000597400 CDK11AQ9UQ88 783 aaPredicted RBP18.26■□□□□ 0.51
ZNF548-207ENST00000597400 CNTLNQ9NXG0 1405 aa18.23■□□□□ 0.51
ZNF548-207ENST00000597400 SYCP2Q9BX26 1530 aa18.23■□□□□ 0.51
ZNF548-207ENST00000597400 PLXNC1O60486 1568 aa18.23■□□□□ 0.51
ZNF548-207ENST00000597400 INO80Q9ULG1 1556 aaPredicted RBP18.22■□□□□ 0.51
ZNF548-207ENST00000597400 UBTFP17480 764 aaKnown RBP18.22■□□□□ 0.51
ZNF548-207ENST00000597400 NPATQ14207 1427 aa18.22■□□□□ 0.51
ZNF548-207ENST00000597400 CCDC18Q5T9S5 1454 aa18.2■□□□□ 0.5
ZNF548-207ENST00000597400 CEP170BQ9Y4F5 1589 aaPredicted RBP18.2■□□□□ 0.5
ZNF548-207ENST00000597400 ATP7AQ04656 1500 aa18.18■□□□□ 0.5
ZNF548-207ENST00000597400 CASKIN1Q8WXD9 1431 aa18.18■□□□□ 0.5
ZNF548-207ENST00000597400 ZNF335Q9H4Z2 1342 aaPredicted RBP18.18■□□□□ 0.5
ZNF548-207ENST00000597400 ESF1Q9H501 851 aaKnown RBP18.17■□□□□ 0.5
ZNF548-207ENST00000597400 TCOF1Q13428 1488 aaKnown RBP18.17■□□□□ 0.5
ZNF548-207ENST00000597400 NCKAP5LQ9HCH0 1330 aa18.16■□□□□ 0.5
ZNF548-207ENST00000597400 ZMYM3Q14202 1370 aa18.16■□□□□ 0.5
ZNF548-207ENST00000597400 PLA2R1Q13018 1463 aa18.15■□□□□ 0.5
ZNF548-207ENST00000597400 POLR1AO95602 1720 aaPredicted RBP18.14■□□□□ 0.49
ZNF548-207ENST00000597400 GPATCH8Q9UKJ3 1502 aaKnown RBP18.13■□□□□ 0.49
ZNF548-207ENST00000597400 PTPRKQ15262 1439 aa18.13■□□□□ 0.49
ZNF548-207ENST00000597400 ADGBQ8N7X0 1667 aa18.12■□□□□ 0.49
ZNF548-207ENST00000597400 FYCO1Q9BQS8 1478 aa18.12■□□□□ 0.49
ZNF548-207ENST00000597400 DNMT1P26358 1616 aaKnown RBP18.11■□□□□ 0.49
ZNF548-207ENST00000597400 NEURL4Q96JN8 1562 aa18.1■□□□□ 0.49
ZNF548-207ENST00000597400 A2MP01023 1474 aa18.1■□□□□ 0.49
ZNF548-207ENST00000597400 MED1Q15648 1581 aaPredicted RBP18.09■□□□□ 0.49
ZNF548-207ENST00000597400 UBAP1LF5GYI3 381 aa18.09■□□□□ 0.49
ZNF548-207ENST00000597400 SPAG9O60271 1321 aaKnown RBP18.07■□□□□ 0.48
ZNF548-207ENST00000597400 HNRNPMP52272 730 aaKnown RBP eCLIP18.07■□□□□ 0.48
ZNF548-207ENST00000597400 ZNF777Q9ULD5 760 aaPredicted RBP18.07■□□□□ 0.48
ZNF548-207ENST00000597400 ALKQ9UM73 1620 aa18.04■□□□□ 0.48
ZNF548-207ENST00000597400 KIAA1107Q9UPP5 1409 aa18.04■□□□□ 0.48
ZNF548-207ENST00000597400 A2ML1A8K2U0 1454 aa18.03■□□□□ 0.48
ZNF548-207ENST00000597400 PKD2Q13563 968 aa18.03■□□□□ 0.48
ZNF548-207ENST00000597400 TIAM1Q13009 1591 aa18.03■□□□□ 0.48
ZNF548-207ENST00000597400 PLEKHH2Q8IVE3 1493 aa18.01■□□□□ 0.47
ZNF548-207ENST00000597400 GGT6Q6P531 493 aa17.99■□□□□ 0.47
ZNF548-207ENST00000597400 PPP6R1Q9UPN7 881 aa17.99■□□□□ 0.47
ZNF548-207ENST00000597400 VWDEQ8N2E2 1590 aa17.99■□□□□ 0.47
ZNF548-207ENST00000597400 STRCP1A6NGW2 1772 aa17.98■□□□□ 0.47
ZNF548-207ENST00000597400 CPS1P31327 1500 aa17.98■□□□□ 0.47
ZNF548-207ENST00000597400 MBD5Q9P267 1494 aa17.97■□□□□ 0.47
ZNF548-207ENST00000597400 HSPA1LP34931 641 aa17.97■□□□□ 0.47
ZNF548-207ENST00000597400 CHIC1Q5VXU3 224 aa17.96■□□□□ 0.47
ZNF548-207ENST00000597400 SHANK2Q9UPX8 1470 aa17.95■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms