RNA–Protein interactions for RNA: ENST00000594297.1

FOXA3-202, Transcript of forkhead box A3, humanhuman

TSL 3

Gene FOXA3, Length 538 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA3-202ENST00000594297 EEA1Q15075 1411 aa25.66■■□□□ 1.7
FOXA3-202ENST00000594297 MLECQ14165 292 aa25.65■■□□□ 1.7
FOXA3-202ENST00000594297 MYO5CQ9NQX4 1742 aa25.64■■□□□ 1.7
FOXA3-202ENST00000594297 SCAPERQ9BY12 1400 aa25.63■■□□□ 1.69
FOXA3-202ENST00000594297 CERKQ8TCT0 537 aa25.63■■□□□ 1.69
FOXA3-202ENST00000594297 PLCH2O75038 1416 aa25.62■■□□□ 1.69
FOXA3-202ENST00000594297 C9orf84Q5VXU9 1444 aa25.61■■□□□ 1.69
FOXA3-202ENST00000594297 ATP10AO60312 1499 aa25.59■■□□□ 1.69
FOXA3-202ENST00000594297 KIF14Q15058 1648 aa25.56■■□□□ 1.68
FOXA3-202ENST00000594297 STRCQ7RTU9 1775 aa25.55■■□□□ 1.68
FOXA3-202ENST00000594297 KDM5CP41229 1560 aa25.52■■□□□ 1.68
FOXA3-202ENST00000594297 ZNF518AQ6AHZ1 1483 aa25.5■■□□□ 1.67
FOXA3-202ENST00000594297 DIP2CQ9Y2E4 1556 aa25.49■■□□□ 1.67
FOXA3-202ENST00000594297 CEBPAP49715 358 aaPredicted RBP25.47■■□□□ 1.67
FOXA3-202ENST00000594297 ABCA6Q8N139 1617 aa25.46■■□□□ 1.67
FOXA3-202ENST00000594297 ARHGAP5Q13017 1502 aa25.46■■□□□ 1.67
FOXA3-202ENST00000594297 LRRIQ1Q96JM4 1722 aa25.45■■□□□ 1.66
FOXA3-202ENST00000594297 UHRF1BP1Q6BDS2 1440 aa25.45■■□□□ 1.66
FOXA3-202ENST00000594297 REREQ9P2R6 1566 aa25.44■■□□□ 1.66
FOXA3-202ENST00000594297 EFCAB2Q5VUJ9 269 aa25.44■■□□□ 1.66
FOXA3-202ENST00000594297 C3P01024 1663 aa25.44■■□□□ 1.66
FOXA3-202ENST00000594297 FMN1Q68DA7 1419 aa25.44■■□□□ 1.66
FOXA3-202ENST00000594297 CHIC1Q5VXU3 224 aa25.43■■□□□ 1.66
FOXA3-202ENST00000594297 ARHGAP35Q9NRY4 1499 aa25.41■■□□□ 1.66
FOXA3-202ENST00000594297 TROQ12816 1431 aaPredicted RBP25.4■■□□□ 1.66
FOXA3-202ENST00000594297 DISP3Q9P2K9 1392 aa25.4■■□□□ 1.66
FOXA3-202ENST00000594297 CDC42BPBQ9Y5S2 1711 aa25.4■■□□□ 1.66
FOXA3-202ENST00000594297 ATP1B4Q9UN42 357 aaPredicted RBP25.38■■□□□ 1.65
FOXA3-202ENST00000594297 SPATA31D1Q6ZQQ2 1576 aa25.36■■□□□ 1.65
FOXA3-202ENST00000594297 ILDR2Q71H61 639 aa25.36■■□□□ 1.65
FOXA3-202ENST00000594297 PREX2Q70Z35 1606 aa25.36■■□□□ 1.65
FOXA3-202ENST00000594297 ITSN2Q9NZM3 1697 aa25.36■■□□□ 1.65
FOXA3-202ENST00000594297 AFAP1Q8N556 730 aa25.35■■□□□ 1.65
FOXA3-202ENST00000594297 ABCC1P33527 1531 aa25.35■■□□□ 1.65
FOXA3-202ENST00000594297 CLIP1P30622 1438 aa25.35■■□□□ 1.65
FOXA3-202ENST00000594297 DMRT2Q9Y5R5 561 aa25.34■■□□□ 1.65
FOXA3-202ENST00000594297 SETD1BQ9UPS6 1966 aaKnown RBP25.34■■□□□ 1.65
FOXA3-202ENST00000594297 CDK11AQ9UQ88 783 aaPredicted RBP25.33■■□□□ 1.65
FOXA3-202ENST00000594297 MLH3Q9UHC1 1453 aa25.33■■□□□ 1.65
FOXA3-202ENST00000594297 AGLP35573 1532 aa25.32■■□□□ 1.64
FOXA3-202ENST00000594297 PTPRTO14522 1441 aa25.32■■□□□ 1.64
FOXA3-202ENST00000594297 LTBP4Q8N2S1 1624 aa25.3■■□□□ 1.64
FOXA3-202ENST00000594297 EHMT2Q96KQ7 1210 aa25.3■■□□□ 1.64
FOXA3-202ENST00000594297 MYT1LQ9UL68 1186 aa25.29■■□□□ 1.64
FOXA3-202ENST00000594297 KIDINS220Q9ULH0 1771 aa25.28■■□□□ 1.64
FOXA3-202ENST00000594297 TRAPPC8Q9Y2L5 1435 aa25.28■■□□□ 1.64
FOXA3-202ENST00000594297 UBTFP17480 764 aaKnown RBP25.25■■□□□ 1.63
FOXA3-202ENST00000594297 NCOA1Q15788 1441 aa25.24■■□□□ 1.63
FOXA3-202ENST00000594297 SOCS7O14512 581 aa25.24■■□□□ 1.63
FOXA3-202ENST00000594297 CDC42BPAQ5VT25 1732 aa25.23■■□□□ 1.63
FOXA3-202ENST00000594297 MROH2AA6NES4 1674 aa25.22■■□□□ 1.63
FOXA3-202ENST00000594297 IQSEC2Q5JU85 1478 aa25.21■■□□□ 1.63
FOXA3-202ENST00000594297 CNTLNQ9NXG0 1405 aa25.2■■□□□ 1.62
FOXA3-202ENST00000594297 CCDC18Q5T9S5 1454 aa25.18■■□□□ 1.62
FOXA3-202ENST00000594297 CAMSAP1Q5T5Y3 1602 aa25.18■■□□□ 1.62
FOXA3-202ENST00000594297 SAMD9LQ8IVG5 1584 aa25.18■■□□□ 1.62
FOXA3-202ENST00000594297 ESF1Q9H501 851 aaKnown RBP25.17■■□□□ 1.62
FOXA3-202ENST00000594297 ZNF142P52746 1687 aaPredicted RBP25.13■■□□□ 1.61
FOXA3-202ENST00000594297 NPATQ14207 1427 aa25.13■■□□□ 1.61
FOXA3-202ENST00000594297 SYCP2Q9BX26 1530 aa25.13■■□□□ 1.61
FOXA3-202ENST00000594297 MYO3AQ8NEV4 1616 aa25.13■■□□□ 1.61
FOXA3-202ENST00000594297 CASKIN1Q8WXD9 1431 aa25.12■■□□□ 1.61
FOXA3-202ENST00000594297 SUPT6HQ7KZ85 1726 aaKnown RBP25.12■■□□□ 1.61
FOXA3-202ENST00000594297 CLTCQ00610 1675 aaKnown RBP25.1■■□□□ 1.61
FOXA3-202ENST00000594297 PLXNC1O60486 1568 aa25.09■■□□□ 1.61
FOXA3-202ENST00000594297 INO80Q9ULG1 1556 aaPredicted RBP25.08■■□□□ 1.61
FOXA3-202ENST00000594297 ATP7AQ04656 1500 aa25.07■■□□□ 1.6
FOXA3-202ENST00000594297 CEP170BQ9Y4F5 1589 aaPredicted RBP25.05■■□□□ 1.6
FOXA3-202ENST00000594297 FYCO1Q9BQS8 1478 aa25.04■■□□□ 1.6
FOXA3-202ENST00000594297 ZMYM3Q14202 1370 aa25.03■■□□□ 1.6
FOXA3-202ENST00000594297 PLA2R1Q13018 1463 aa25.02■■□□□ 1.6
FOXA3-202ENST00000594297 ZNF335Q9H4Z2 1342 aaPredicted RBP25.01■■□□□ 1.59
FOXA3-202ENST00000594297 GPATCH8Q9UKJ3 1502 aaKnown RBP25.01■■□□□ 1.59
FOXA3-202ENST00000594297 NCKAP5LQ9HCH0 1330 aa25■■□□□ 1.59
FOXA3-202ENST00000594297 TCOF1Q13428 1488 aaKnown RBP24.99■■□□□ 1.59
FOXA3-202ENST00000594297 ZNF777Q9ULD5 760 aaPredicted RBP24.99■■□□□ 1.59
FOXA3-202ENST00000594297 SPAG9O60271 1321 aaKnown RBP24.98■■□□□ 1.59
FOXA3-202ENST00000594297 A2MP01023 1474 aa24.97■■□□□ 1.59
FOXA3-202ENST00000594297 PTPRKQ15262 1439 aa24.97■■□□□ 1.59
FOXA3-202ENST00000594297 ADGBQ8N7X0 1667 aa24.94■■□□□ 1.58
FOXA3-202ENST00000594297 UBAP1LF5GYI3 381 aa24.93■■□□□ 1.58
FOXA3-202ENST00000594297 HNRNPMP52272 730 aaKnown RBP eCLIP24.93■■□□□ 1.58
FOXA3-202ENST00000594297 PLEKHH2Q8IVE3 1493 aa24.92■■□□□ 1.58
FOXA3-202ENST00000594297 KIAA1107Q9UPP5 1409 aa24.92■■□□□ 1.58
FOXA3-202ENST00000594297 PKD2Q13563 968 aa24.9■■□□□ 1.58
FOXA3-202ENST00000594297 POLR1AO95602 1720 aaPredicted RBP24.89■■□□□ 1.57
FOXA3-202ENST00000594297 DNMT1P26358 1616 aaKnown RBP24.88■■□□□ 1.57
FOXA3-202ENST00000594297 A2ML1A8K2U0 1454 aa24.86■■□□□ 1.57
FOXA3-202ENST00000594297 NEURL4Q96JN8 1562 aa24.85■■□□□ 1.57
FOXA3-202ENST00000594297 GGT6Q6P531 493 aa24.85■■□□□ 1.57
FOXA3-202ENST00000594297 TIAM1Q13009 1591 aa24.84■■□□□ 1.57
FOXA3-202ENST00000594297 PPP6R1Q9UPN7 881 aa24.84■■□□□ 1.57
FOXA3-202ENST00000594297 MED1Q15648 1581 aaPredicted RBP24.84■■□□□ 1.57
FOXA3-202ENST00000594297 CCNB3Q8WWL7 1395 aa24.83■■□□□ 1.57
FOXA3-202ENST00000594297 CFDP1Q9UEE9 299 aaPredicted RBP24.83■■□□□ 1.57
FOXA3-202ENST00000594297 CPS1P31327 1500 aa24.77■■□□□ 1.56
FOXA3-202ENST00000594297 MBD5Q9P267 1494 aa24.77■■□□□ 1.56
FOXA3-202ENST00000594297 MTUS2Q5JR59 1369 aa24.76■■□□□ 1.55
FOXA3-202ENST00000594297 EHBP1L1Q8N3D4 1523 aa24.76■■□□□ 1.55
FOXA3-202ENST00000594297 KDM5DQ9BY66 1539 aa24.75■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms