RNA–Protein interactions for RNA: ENST00000591275.5

DDX39A-216, Transcript of DExD-box helicase 39A, humanhuman

TSL 2

Gene DDX39A, Length 484 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-216ENST00000591275 MAGI2Q86UL8 1455 aa26.59■■□□□ 1.85
DDX39A-216ENST00000591275 PLCH2O75038 1416 aa26.58■■□□□ 1.85
DDX39A-216ENST00000591275 ATP1B4Q9UN42 357 aaPredicted RBP26.58■■□□□ 1.85
DDX39A-216ENST00000591275 FER1L4A9Z1Z3 1794 aa26.56■■□□□ 1.84
DDX39A-216ENST00000591275 ATP10AO60312 1499 aa26.49■■□□□ 1.83
DDX39A-216ENST00000591275 MYO5CQ9NQX4 1742 aa26.49■■□□□ 1.83
DDX39A-216ENST00000591275 UBTFP17480 764 aaKnown RBP26.49■■□□□ 1.83
DDX39A-216ENST00000591275 EFCAB2Q5VUJ9 269 aa26.48■■□□□ 1.83
DDX39A-216ENST00000591275 C9orf84Q5VXU9 1444 aa26.47■■□□□ 1.83
DDX39A-216ENST00000591275 FMN1Q68DA7 1419 aa26.47■■□□□ 1.83
DDX39A-216ENST00000591275 KIF14Q15058 1648 aa26.46■■□□□ 1.83
DDX39A-216ENST00000591275 ARHGEF12Q9NZN5 1544 aa26.45■■□□□ 1.83
DDX39A-216ENST00000591275 CERKQ8TCT0 537 aa26.44■■□□□ 1.82
DDX39A-216ENST00000591275 ARHGAP35Q9NRY4 1499 aa26.43■■□□□ 1.82
DDX39A-216ENST00000591275 CEBPAP49715 358 aaPredicted RBP26.43■■□□□ 1.82
DDX39A-216ENST00000591275 CDK11AQ9UQ88 783 aaPredicted RBP26.43■■□□□ 1.82
DDX39A-216ENST00000591275 ARHGAP5Q13017 1502 aa26.39■■□□□ 1.82
DDX39A-216ENST00000591275 PREX1Q8TCU6 1659 aa26.39■■□□□ 1.82
DDX39A-216ENST00000591275 ZNF518AQ6AHZ1 1483 aa26.39■■□□□ 1.82
DDX39A-216ENST00000591275 AFAP1Q8N556 730 aa26.39■■□□□ 1.82
DDX39A-216ENST00000591275 TROQ12816 1431 aaPredicted RBP26.38■■□□□ 1.81
DDX39A-216ENST00000591275 MYT1LQ9UL68 1186 aa26.37■■□□□ 1.81
DDX39A-216ENST00000591275 KDM5CP41229 1560 aa26.34■■□□□ 1.81
DDX39A-216ENST00000591275 LRRIQ1Q96JM4 1722 aa26.34■■□□□ 1.81
DDX39A-216ENST00000591275 CLIP1P30622 1438 aa26.33■■□□□ 1.81
DDX39A-216ENST00000591275 DIP2CQ9Y2E4 1556 aa26.31■■□□□ 1.8
DDX39A-216ENST00000591275 CDC42BPBQ9Y5S2 1711 aa26.28■■□□□ 1.8
DDX39A-216ENST00000591275 STRCQ7RTU9 1775 aa26.28■■□□□ 1.8
DDX39A-216ENST00000591275 UHRF1BP1Q6BDS2 1440 aa26.27■■□□□ 1.8
DDX39A-216ENST00000591275 ABCA6Q8N139 1617 aa26.27■■□□□ 1.8
DDX39A-216ENST00000591275 SETD1BQ9UPS6 1966 aaKnown RBP26.24■■□□□ 1.79
DDX39A-216ENST00000591275 DMRT2Q9Y5R5 561 aa26.23■■□□□ 1.79
DDX39A-216ENST00000591275 REREQ9P2R6 1566 aa26.23■■□□□ 1.79
DDX39A-216ENST00000591275 MLH3Q9UHC1 1453 aa26.23■■□□□ 1.79
DDX39A-216ENST00000591275 TRAPPC8Q9Y2L5 1435 aa26.22■■□□□ 1.79
DDX39A-216ENST00000591275 PREX2Q70Z35 1606 aa26.21■■□□□ 1.79
DDX39A-216ENST00000591275 C3P01024 1663 aa26.21■■□□□ 1.79
DDX39A-216ENST00000591275 ABCC1P33527 1531 aa26.2■■□□□ 1.79
DDX39A-216ENST00000591275 CHIC1Q5VXU3 224 aa26.19■■□□□ 1.78
DDX39A-216ENST00000591275 ESF1Q9H501 851 aaKnown RBP26.19■■□□□ 1.78
DDX39A-216ENST00000591275 ITSN2Q9NZM3 1697 aa26.18■■□□□ 1.78
DDX39A-216ENST00000591275 AGLP35573 1532 aa26.16■■□□□ 1.78
DDX39A-216ENST00000591275 CASKIN1Q8WXD9 1431 aa26.15■■□□□ 1.78
DDX39A-216ENST00000591275 CCDC18Q5T9S5 1454 aa26.15■■□□□ 1.78
DDX39A-216ENST00000591275 KIDINS220Q9ULH0 1771 aa26.14■■□□□ 1.78
DDX39A-216ENST00000591275 CDC42BPAQ5VT25 1732 aa26.12■■□□□ 1.77
DDX39A-216ENST00000591275 PTPRTO14522 1441 aa26.1■■□□□ 1.77
DDX39A-216ENST00000591275 DISP3Q9P2K9 1392 aa26.09■■□□□ 1.77
DDX39A-216ENST00000591275 ZNF777Q9ULD5 760 aaPredicted RBP26.09■■□□□ 1.77
DDX39A-216ENST00000591275 CNTLNQ9NXG0 1405 aa26.05■■□□□ 1.76
DDX39A-216ENST00000591275 SAMD9LQ8IVG5 1584 aa26.05■■□□□ 1.76
DDX39A-216ENST00000591275 ILDR2Q71H61 639 aa26.04■■□□□ 1.76
DDX39A-216ENST00000591275 NCOA1Q15788 1441 aa26.03■■□□□ 1.76
DDX39A-216ENST00000591275 SYCP2Q9BX26 1530 aa26.03■■□□□ 1.76
DDX39A-216ENST00000591275 FYCO1Q9BQS8 1478 aa26.02■■□□□ 1.76
DDX39A-216ENST00000591275 HNRNPMP52272 730 aaKnown RBP eCLIP26.01■■□□□ 1.754e-15■■■■□ 20.6
DDX39A-216ENST00000591275 LTBP4Q8N2S1 1624 aa26.01■■□□□ 1.75
DDX39A-216ENST00000591275 SPAG9O60271 1321 aaKnown RBP26■■□□□ 1.75
DDX39A-216ENST00000591275 SUPT6HQ7KZ85 1726 aaKnown RBP26■■□□□ 1.75
DDX39A-216ENST00000591275 GPATCH8Q9UKJ3 1502 aaKnown RBP25.98■■□□□ 1.75
DDX39A-216ENST00000591275 CAMSAP1Q5T5Y3 1602 aa25.98■■□□□ 1.75
DDX39A-216ENST00000591275 ZMYM3Q14202 1370 aa25.97■■□□□ 1.75
DDX39A-216ENST00000591275 MROH2AA6NES4 1674 aa25.97■■□□□ 1.75
DDX39A-216ENST00000591275 NPATQ14207 1427 aa25.97■■□□□ 1.75
DDX39A-216ENST00000591275 ATP7AQ04656 1500 aa25.94■■□□□ 1.74
DDX39A-216ENST00000591275 CLTCQ00610 1675 aaKnown RBP25.93■■□□□ 1.74
DDX39A-216ENST00000591275 NCKAP5LQ9HCH0 1330 aa25.92■■□□□ 1.74
DDX39A-216ENST00000591275 CFDP1Q9UEE9 299 aaPredicted RBP25.92■■□□□ 1.74
DDX39A-216ENST00000591275 SPATA31D1Q6ZQQ2 1576 aa25.91■■□□□ 1.74
DDX39A-216ENST00000591275 INO80Q9ULG1 1556 aaPredicted RBP25.9■■□□□ 1.74
DDX39A-216ENST00000591275 A2MP01023 1474 aa25.89■■□□□ 1.73
DDX39A-216ENST00000591275 IQSEC2Q5JU85 1478 aa25.89■■□□□ 1.73
DDX39A-216ENST00000591275 KIAA1107Q9UPP5 1409 aa25.88■■□□□ 1.73
DDX39A-216ENST00000591275 PLXNC1O60486 1568 aa25.88■■□□□ 1.73
DDX39A-216ENST00000591275 CCNB3Q8WWL7 1395 aa25.88■■□□□ 1.73
DDX39A-216ENST00000591275 SOCS7O14512 581 aa25.88■■□□□ 1.73
DDX39A-216ENST00000591275 GGT6Q6P531 493 aa25.88■■□□□ 1.73
DDX39A-216ENST00000591275 PLEKHH2Q8IVE3 1493 aa25.87■■□□□ 1.73
DDX39A-216ENST00000591275 ZNF335Q9H4Z2 1342 aaPredicted RBP25.87■■□□□ 1.73
DDX39A-216ENST00000591275 MYO3AQ8NEV4 1616 aa25.86■■□□□ 1.73
DDX39A-216ENST00000591275 PTPRKQ15262 1439 aa25.84■■□□□ 1.73
DDX39A-216ENST00000591275 ZNF142P52746 1687 aaPredicted RBP25.83■■□□□ 1.73
DDX39A-216ENST00000591275 MTUS2Q5JR59 1369 aa25.82■■□□□ 1.72
DDX39A-216ENST00000591275 CEP170BQ9Y4F5 1589 aaPredicted RBP25.82■■□□□ 1.72
DDX39A-216ENST00000591275 ZNF644Q9H582 1327 aaPredicted RBP25.81■■□□□ 1.72
DDX39A-216ENST00000591275 PLA2R1Q13018 1463 aa25.79■■□□□ 1.72
DDX39A-216ENST00000591275 PKD2Q13563 968 aa25.79■■□□□ 1.72
DDX39A-216ENST00000591275 ADGBQ8N7X0 1667 aa25.78■■□□□ 1.72
DDX39A-216ENST00000591275 UBAP1LF5GYI3 381 aa25.78■■□□□ 1.72
DDX39A-216ENST00000591275 TCOF1Q13428 1488 aaKnown RBP25.77■■□□□ 1.72
DDX39A-216ENST00000591275 TIAM1Q13009 1591 aa25.76■■□□□ 1.71
DDX39A-216ENST00000591275 PPP6R1Q9UPN7 881 aa25.73■■□□□ 1.71
DDX39A-216ENST00000591275 MBD5Q9P267 1494 aa25.72■■□□□ 1.71
DDX39A-216ENST00000591275 A2ML1A8K2U0 1454 aa25.7■■□□□ 1.7
DDX39A-216ENST00000591275 DNMT1P26358 1616 aaKnown RBP25.69■■□□□ 1.7
DDX39A-216ENST00000591275 EHBP1L1Q8N3D4 1523 aa25.68■■□□□ 1.7
DDX39A-216ENST00000591275 DHX29Q7Z478 1369 aaKnown RBP25.67■■□□□ 1.7
DDX39A-216ENST00000591275 RTEL1-TNFRSF6BF6WH68 1400 aa25.66■■□□□ 1.7
DDX39A-216ENST00000591275 FBXO31Q5XUX0 539 aaPredicted RBP25.66■■□□□ 1.7
DDX39A-216ENST00000591275 KIF3BO15066 747 aa25.64■■□□□ 1.7
Retrieved 100 of 20,778 RNA–protein pairs in 73.2 ms