RNA–Protein interactions for RNA: ENST00000591043.1

GCDH-214, Transcript of glutaryl-CoA dehydrogenase, humanhuman

TSL 5

Gene GCDH, Length 1,764 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCDH-214ENST00000591043 ADGBQ8N7X0 1667 aa29.44■■■□□ 2.3
GCDH-214ENST00000591043 CAMSAP2Q08AD1 1489 aa29.44■■■□□ 2.3
GCDH-214ENST00000591043 ABCC5O15440 1437 aa29.44■■■□□ 2.3
GCDH-214ENST00000591043 CDC42BPAQ5VT25 1732 aa29.41■■■□□ 2.3
GCDH-214ENST00000591043 CROCC2H7BZ55 1655 aa29.41■■■□□ 2.3
GCDH-214ENST00000591043 CFDP1Q9UEE9 299 aaPredicted RBP29.4■■■□□ 2.3
GCDH-214ENST00000591043 CLASP1Q7Z460 1538 aa29.4■■■□□ 2.3
GCDH-214ENST00000591043 ABCC10Q5T3U5 1492 aa29.39■■■□□ 2.3
GCDH-214ENST00000591043 RRP7BPQ9NSQ0 103 aa29.37■■■□□ 2.29
GCDH-214ENST00000591043 CHIC2Q9UKJ5 165 aa29.36■■■□□ 2.29
GCDH-214ENST00000591043 ADGRL2O95490 1459 aa29.34■■■□□ 2.29
GCDH-214ENST00000591043 SIN3AQ96ST3 1273 aa29.34■■■□□ 2.29
GCDH-214ENST00000591043 NEUROD1Q13562 356 aa29.32■■■□□ 2.28
GCDH-214ENST00000591043 CYB5RLQ6IPT4 315 aa29.31■■■□□ 2.28
GCDH-214ENST00000591043 ABCC2Q92887 1545 aa29.31■■■□□ 2.28
GCDH-214ENST00000591043 KDM6BO15054 1643 aa29.3■■■□□ 2.28
GCDH-214ENST00000591043 SHANK2Q9UPX8 1470 aa29.3■■■□□ 2.28
GCDH-214ENST00000591043 TONSLQ96HA7 1378 aa29.3■■■□□ 2.28
GCDH-214ENST00000591043 ZNF644Q9H582 1327 aaPredicted RBP29.27■■■□□ 2.28
GCDH-214ENST00000591043 PPP1R15AO75807 674 aaPredicted RBP29.26■■■□□ 2.27
GCDH-214ENST00000591043 PREX2Q70Z35 1606 aa29.25■■■□□ 2.27
GCDH-214ENST00000591043 ARHGEF5Q12774 1597 aa29.24■■■□□ 2.27
GCDH-214ENST00000591043 UHRF1BP1LA0JNW5 1464 aa29.23■■■□□ 2.27
GCDH-214ENST00000591043 NCOA1Q15788 1441 aa29.23■■■□□ 2.27
GCDH-214ENST00000591043 TRIM52Q96A61 297 aa29.23■■■□□ 2.27
GCDH-214ENST00000591043 ANKRD30AQ9BXX3 1397 aa29.22■■■□□ 2.27
GCDH-214ENST00000591043 ERCC6L2Q5T890 1561 aa29.18■■■□□ 2.26
GCDH-214ENST00000591043 MPHOSPH9Q99550 1183 aa29.18■■■□□ 2.26
GCDH-214ENST00000591043 DENND4BO75064 1496 aaPredicted RBP29.18■■■□□ 2.26
GCDH-214ENST00000591043 CDC42BPBQ9Y5S2 1711 aa29.16■■■□□ 2.26
GCDH-214ENST00000591043 CENPBP07199 599 aaPredicted RBP29.16■■■□□ 2.26
GCDH-214ENST00000591043 ZNF777Q9ULD5 760 aaPredicted RBP29.15■■■□□ 2.26
GCDH-214ENST00000591043 RSPH4AQ5TD94 716 aa29.14■■■□□ 2.26
GCDH-214ENST00000591043 MIER1Q8N108 512 aa29.12■■■□□ 2.25
GCDH-214ENST00000591043 MYO5CQ9NQX4 1742 aa29.12■■■□□ 2.25
GCDH-214ENST00000591043 TRHP20396 242 aaPredicted RBP29.11■■■□□ 2.25
GCDH-214ENST00000591043 C9orf84Q5VXU9 1444 aa29.1■■■□□ 2.25
GCDH-214ENST00000591043 ZCCHC11Q5TAX3 1644 aaKnown RBP29.09■■■□□ 2.25
GCDH-214ENST00000591043 KDM5BQ9UGL1 1544 aa29.08■■■□□ 2.25
GCDH-214ENST00000591043 PLEKHH2Q8IVE3 1493 aa29.08■■■□□ 2.25
GCDH-214ENST00000591043 SAMD9LQ8IVG5 1584 aa29.08■■■□□ 2.25
GCDH-214ENST00000591043 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP29.07■■■□□ 2.24
GCDH-214ENST00000591043 CCDC141Q6ZP82 1450 aa29.06■■■□□ 2.24
GCDH-214ENST00000591043 TSPY4P0CV99 314 aa29.06■■■□□ 2.24
GCDH-214ENST00000591043 TSPY10P0CW01 314 aa29.06■■■□□ 2.24
GCDH-214ENST00000591043 MBD5Q9P267 1494 aa29.05■■■□□ 2.24
GCDH-214ENST00000591043 TTC37Q6PGP7 1564 aa29.05■■■□□ 2.24
GCDH-214ENST00000591043 ANKRD50Q9ULJ7 1429 aa29.04■■■□□ 2.24
GCDH-214ENST00000591043 MAST1Q9Y2H9 1570 aa29.04■■■□□ 2.24
GCDH-214ENST00000591043 ANKRD30BQ9BXX2 1392 aa29.03■■■□□ 2.24
GCDH-214ENST00000591043 SCAF1Q9H7N4 1312 aaKnown RBP29.02■■■□□ 2.24
GCDH-214ENST00000591043 PZPP20742 1482 aa29.02■■■□□ 2.24
GCDH-214ENST00000591043 RPRD2Q5VT52 1461 aaKnown RBP29.02■■■□□ 2.24
GCDH-214ENST00000591043 ARHGAP5Q13017 1502 aa29.01■■■□□ 2.23
GCDH-214ENST00000591043 KDM5DQ9BY66 1539 aa29■■■□□ 2.23
GCDH-214ENST00000591043 SLC4A1APQ9BWU0 796 aaKnown RBP29■■■□□ 2.23
GCDH-214ENST00000591043 KIAA1107Q9UPP5 1409 aa28.99■■■□□ 2.23
GCDH-214ENST00000591043 ARAP3Q8WWN8 1544 aa28.93■■■□□ 2.22
GCDH-214ENST00000591043 KIF15Q9NS87 1388 aa28.91■■■□□ 2.22
GCDH-214ENST00000591043 SYCP2Q9BX26 1530 aa28.91■■■□□ 2.22
GCDH-214ENST00000591043 PLXNC1O60486 1568 aa28.91■■■□□ 2.22
GCDH-214ENST00000591043 PLCH2O75038 1416 aa28.9■■■□□ 2.22
GCDH-214ENST00000591043 HNRNPMP52272 730 aaKnown RBP eCLIP28.89■■■□□ 2.22
GCDH-214ENST00000591043 TEX14Q8IWB6 1497 aa28.86■■■□□ 2.21
GCDH-214ENST00000591043 EFCAB2Q5VUJ9 269 aa28.81■■■□□ 2.2
GCDH-214ENST00000591043 L3MBTL2Q969R5 705 aa28.8■■■□□ 2.2
GCDH-214ENST00000591043 NUP155O75694 1391 aa28.8■■■□□ 2.2
GCDH-214ENST00000591043 FOXD1Q16676 465 aa28.8■■■□□ 2.2
GCDH-214ENST00000591043 UNC13BO14795 1591 aa28.8■■■□□ 2.2
GCDH-214ENST00000591043 WDR7Q9Y4E6 1490 aa28.79■■■□□ 2.2
GCDH-214ENST00000591043 ABCC1P33527 1531 aa28.79■■■□□ 2.2
GCDH-214ENST00000591043 PKD2Q13563 968 aa28.76■■■□□ 2.19
GCDH-214ENST00000591043 KCNH8Q96L42 1107 aa28.76■■■□□ 2.19
GCDH-214ENST00000591043 DUOX2Q9NRD8 1548 aa28.76■■■□□ 2.19
GCDH-214ENST00000591043 ABCA9Q8IUA7 1624 aa28.73■■■□□ 2.19
GCDH-214ENST00000591043 EIF4G2P78344 907 aaKnown RBP eCLIP28.71■■■□□ 2.19
GCDH-214ENST00000591043 DDX10Q13206 875 aaKnown RBP28.71■■■□□ 2.19
GCDH-214ENST00000591043 ERBINQ96RT1 1412 aa28.71■■■□□ 2.19
GCDH-214ENST00000591043 FAM135AQ9P2D6 1515 aa28.7■■■□□ 2.19
GCDH-214ENST00000591043 ARHGEF12Q9NZN5 1544 aa28.69■■■□□ 2.18
GCDH-214ENST00000591043 RTEL1-TNFRSF6BF6WH68 1400 aa28.68■■■□□ 2.18
GCDH-214ENST00000591043 IQGAP3Q86VI3 1631 aa28.68■■■□□ 2.18
GCDH-214ENST00000591043 YTHDC1Q96MU7 727 aaKnown RBP28.67■■■□□ 2.18
GCDH-214ENST00000591043 MAGI2Q86UL8 1455 aa28.64■■■□□ 2.17
GCDH-214ENST00000591043 POLR1AO95602 1720 aaPredicted RBP28.63■■■□□ 2.17
GCDH-214ENST00000591043 HSPA5P11021 654 aaKnown RBP28.62■■■□□ 2.17
GCDH-214ENST00000591043 UHRF1BP1Q6BDS2 1440 aa28.6■■■□□ 2.17
GCDH-214ENST00000591043 HIRIP3Q9BW71 556 aaPredicted RBP28.59■■■□□ 2.17
GCDH-214ENST00000591043 CCER2I3L3R5 266 aa28.57■■■□□ 2.16
GCDH-214ENST00000591043 ANP32CO43423 234 aa28.57■■■□□ 2.16
GCDH-214ENST00000591043 ASXL2Q76L83 1435 aa28.57■■■□□ 2.16
GCDH-214ENST00000591043 FANCAO15360 1455 aa28.56■■■□□ 2.16
GCDH-214ENST00000591043 TRAPPC8Q9Y2L5 1435 aa28.56■■■□□ 2.16
GCDH-214ENST00000591043 NBPF8Q3BBV2 869 aa28.55■■■□□ 2.16
GCDH-214ENST00000591043 ZFYVE16Q7Z3T8 1539 aa28.55■■■□□ 2.16
GCDH-214ENST00000591043 CFAP74Q9C0B2 1584 aa28.53■■■□□ 2.16
GCDH-214ENST00000591043 NPM1P06748 294 aaKnown RBP eCLIP28.53■■■□□ 2.16
GCDH-214ENST00000591043 PELP1Q8IZL8 1130 aaKnown RBP28.53■■■□□ 2.16
GCDH-214ENST00000591043 SPATA31E1Q6ZUB1 1445 aa28.52■■■□□ 2.16
GCDH-214ENST00000591043 SPAG9O60271 1321 aaKnown RBP28.52■■■□□ 2.16
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms