RNA–Protein interactions for RNA: ENST00000590701.5

ERCC1-211, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 3

Gene ERCC1, Length 345 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-211ENST00000590701 CDK13Q14004 1512 aaKnown RBP24.59■■□□□ 1.53
ERCC1-211ENST00000590701 MAGI2Q86UL8 1455 aa24.58■■□□□ 1.53
ERCC1-211ENST00000590701 ATP1B4Q9UN42 357 aaPredicted RBP24.57■■□□□ 1.52
ERCC1-211ENST00000590701 PLCH2O75038 1416 aa24.56■■□□□ 1.52
ERCC1-211ENST00000590701 ATP10AO60312 1499 aa24.53■■□□□ 1.52
ERCC1-211ENST00000590701 EHMT2Q96KQ7 1210 aa24.53■■□□□ 1.52
ERCC1-211ENST00000590701 EFCAB2Q5VUJ9 269 aa24.51■■□□□ 1.51
ERCC1-211ENST00000590701 ILDR2Q71H61 639 aa24.5■■□□□ 1.51
ERCC1-211ENST00000590701 ARHGEF12Q9NZN5 1544 aa24.5■■□□□ 1.51
ERCC1-211ENST00000590701 EEA1Q15075 1411 aa24.49■■□□□ 1.51
ERCC1-211ENST00000590701 AFAP1Q8N556 730 aa24.48■■□□□ 1.51
ERCC1-211ENST00000590701 STRCQ7RTU9 1775 aa24.47■■□□□ 1.51
ERCC1-211ENST00000590701 PREX1Q8TCU6 1659 aa24.46■■□□□ 1.51
ERCC1-211ENST00000590701 C9orf84Q5VXU9 1444 aa24.46■■□□□ 1.51
ERCC1-211ENST00000590701 DISP3Q9P2K9 1392 aa24.44■■□□□ 1.5
ERCC1-211ENST00000590701 MYT1LQ9UL68 1186 aa24.44■■□□□ 1.5
ERCC1-211ENST00000590701 MYO5CQ9NQX4 1742 aa24.43■■□□□ 1.5
ERCC1-211ENST00000590701 DMRT2Q9Y5R5 561 aa24.42■■□□□ 1.5
ERCC1-211ENST00000590701 SETD1BQ9UPS6 1966 aaKnown RBP24.41■■□□□ 1.5
ERCC1-211ENST00000590701 UBTFP17480 764 aaKnown RBP24.39■■□□□ 1.49
ERCC1-211ENST00000590701 KIF14Q15058 1648 aa24.39■■□□□ 1.49
ERCC1-211ENST00000590701 CDK11AQ9UQ88 783 aaPredicted RBP24.38■■□□□ 1.49
ERCC1-211ENST00000590701 UHRF1BP1Q6BDS2 1440 aa24.35■■□□□ 1.49
ERCC1-211ENST00000590701 ZNF518AQ6AHZ1 1483 aa24.34■■□□□ 1.49
ERCC1-211ENST00000590701 ARHGAP5Q13017 1502 aa24.34■■□□□ 1.49
ERCC1-211ENST00000590701 SOCS7O14512 581 aa24.33■■□□□ 1.49
ERCC1-211ENST00000590701 FMN1Q68DA7 1419 aa24.32■■□□□ 1.48
ERCC1-211ENST00000590701 ARHGAP35Q9NRY4 1499 aa24.31■■□□□ 1.48
ERCC1-211ENST00000590701 KDM5CP41229 1560 aa24.3■■□□□ 1.48
ERCC1-211ENST00000590701 DIP2CQ9Y2E4 1556 aa24.3■■□□□ 1.48
ERCC1-211ENST00000590701 TROQ12816 1431 aaPredicted RBP24.29■■□□□ 1.48
ERCC1-211ENST00000590701 C3P01024 1663 aa24.29■■□□□ 1.48
ERCC1-211ENST00000590701 LRRIQ1Q96JM4 1722 aa24.27■■□□□ 1.48
ERCC1-211ENST00000590701 CDC42BPBQ9Y5S2 1711 aa24.27■■□□□ 1.48
ERCC1-211ENST00000590701 ESF1Q9H501 851 aaKnown RBP24.27■■□□□ 1.48
ERCC1-211ENST00000590701 PTPRTO14522 1441 aa24.26■■□□□ 1.47
ERCC1-211ENST00000590701 ABCA6Q8N139 1617 aa24.25■■□□□ 1.47
ERCC1-211ENST00000590701 TRAPPC8Q9Y2L5 1435 aa24.25■■□□□ 1.47
ERCC1-211ENST00000590701 MLH3Q9UHC1 1453 aa24.23■■□□□ 1.47
ERCC1-211ENST00000590701 CLIP1P30622 1438 aa24.22■■□□□ 1.47
ERCC1-211ENST00000590701 LTBP4Q8N2S1 1624 aa24.21■■□□□ 1.47
ERCC1-211ENST00000590701 REREQ9P2R6 1566 aa24.2■■□□□ 1.47
ERCC1-211ENST00000590701 AGLP35573 1532 aa24.17■■□□□ 1.46
ERCC1-211ENST00000590701 KIDINS220Q9ULH0 1771 aa24.16■■□□□ 1.46
ERCC1-211ENST00000590701 SPATA31D1Q6ZQQ2 1576 aa24.15■■□□□ 1.46
ERCC1-211ENST00000590701 NCKAP5LQ9HCH0 1330 aa24.14■■□□□ 1.46
ERCC1-211ENST00000590701 ZNF777Q9ULD5 760 aaPredicted RBP24.14■■□□□ 1.45
ERCC1-211ENST00000590701 ITSN2Q9NZM3 1697 aa24.14■■□□□ 1.45
ERCC1-211ENST00000590701 NCOA1Q15788 1441 aa24.13■■□□□ 1.45
ERCC1-211ENST00000590701 ABCC1P33527 1531 aa24.13■■□□□ 1.45
ERCC1-211ENST00000590701 PREX2Q70Z35 1606 aa24.13■■□□□ 1.45
ERCC1-211ENST00000590701 CAMSAP1Q5T5Y3 1602 aa24.1■■□□□ 1.45
ERCC1-211ENST00000590701 ZMYM3Q14202 1370 aa24.09■■□□□ 1.45
ERCC1-211ENST00000590701 CDC42BPAQ5VT25 1732 aa24.09■■□□□ 1.45
ERCC1-211ENST00000590701 HNRNPMP52272 730 aaKnown RBP eCLIP24.08■■□□□ 1.45
ERCC1-211ENST00000590701 CNTLNQ9NXG0 1405 aa24.08■■□□□ 1.44
ERCC1-211ENST00000590701 ZNF335Q9H4Z2 1342 aaPredicted RBP24.07■■□□□ 1.44
ERCC1-211ENST00000590701 SUPT6HQ7KZ85 1726 aaKnown RBP24.05■■□□□ 1.44
ERCC1-211ENST00000590701 UBAP1LF5GYI3 381 aa24.05■■□□□ 1.44
ERCC1-211ENST00000590701 IQSEC2Q5JU85 1478 aa24.05■■□□□ 1.44
ERCC1-211ENST00000590701 SAMD9LQ8IVG5 1584 aa24.03■■□□□ 1.44
ERCC1-211ENST00000590701 CASKIN1Q8WXD9 1431 aa24.03■■□□□ 1.44
ERCC1-211ENST00000590701 SPAG9O60271 1321 aaKnown RBP24.03■■□□□ 1.44
ERCC1-211ENST00000590701 NPATQ14207 1427 aa24.01■■□□□ 1.43
ERCC1-211ENST00000590701 MROH2AA6NES4 1674 aa24.01■■□□□ 1.43
ERCC1-211ENST00000590701 CHIC1Q5VXU3 224 aa24■■□□□ 1.43
ERCC1-211ENST00000590701 CCDC18Q5T9S5 1454 aa24■■□□□ 1.43
ERCC1-211ENST00000590701 CLTCQ00610 1675 aaKnown RBP23.99■■□□□ 1.43
ERCC1-211ENST00000590701 GGT6Q6P531 493 aa23.99■■□□□ 1.43
ERCC1-211ENST00000590701 SYCP2Q9BX26 1530 aa23.97■■□□□ 1.43
ERCC1-211ENST00000590701 GPATCH8Q9UKJ3 1502 aaKnown RBP23.96■■□□□ 1.43
ERCC1-211ENST00000590701 PKD2Q13563 968 aa23.95■■□□□ 1.42
ERCC1-211ENST00000590701 PTPRKQ15262 1439 aa23.93■■□□□ 1.42
ERCC1-211ENST00000590701 CFDP1Q9UEE9 299 aaPredicted RBP23.92■■□□□ 1.42
ERCC1-211ENST00000590701 A2MP01023 1474 aa23.91■■□□□ 1.42
ERCC1-211ENST00000590701 MYO3AQ8NEV4 1616 aa23.91■■□□□ 1.42
ERCC1-211ENST00000590701 ATP7AQ04656 1500 aa23.9■■□□□ 1.42
ERCC1-211ENST00000590701 CEP170BQ9Y4F5 1589 aaPredicted RBP23.88■■□□□ 1.41
ERCC1-211ENST00000590701 PPP6R1Q9UPN7 881 aa23.88■■□□□ 1.41
ERCC1-211ENST00000590701 PLA2R1Q13018 1463 aa23.87■■□□□ 1.41
ERCC1-211ENST00000590701 TCOF1Q13428 1488 aaKnown RBP23.87■■□□□ 1.41
ERCC1-211ENST00000590701 ZNF142P52746 1687 aaPredicted RBP23.87■■□□□ 1.41
ERCC1-211ENST00000590701 ZNF644Q9H582 1327 aaPredicted RBP23.86■■□□□ 1.41
ERCC1-211ENST00000590701 PLXNC1O60486 1568 aa23.86■■□□□ 1.41
ERCC1-211ENST00000590701 KIAA1107Q9UPP5 1409 aa23.85■■□□□ 1.41
ERCC1-211ENST00000590701 PIP4K2BP78356 416 aa23.85■■□□□ 1.41
ERCC1-211ENST00000590701 FYCO1Q9BQS8 1478 aa23.85■■□□□ 1.41
ERCC1-211ENST00000590701 INO80Q9ULG1 1556 aaPredicted RBP23.85■■□□□ 1.41
ERCC1-211ENST00000590701 SCAF1Q9H7N4 1312 aaKnown RBP23.84■■□□□ 1.41
ERCC1-211ENST00000590701 CCNB3Q8WWL7 1395 aa23.84■■□□□ 1.41
ERCC1-211ENST00000590701 HSPA1LP34931 641 aa23.84■■□□□ 1.41
ERCC1-211ENST00000590701 FBXO31Q5XUX0 539 aaPredicted RBP23.82■■□□□ 1.4
ERCC1-211ENST00000590701 PLEKHH2Q8IVE3 1493 aa23.8■■□□□ 1.4
ERCC1-211ENST00000590701 DNMT1P26358 1616 aaKnown RBP23.79■■□□□ 1.4
ERCC1-211ENST00000590701 A2ML1A8K2U0 1454 aa23.78■■□□□ 1.4
ERCC1-211ENST00000590701 ADGBQ8N7X0 1667 aa23.77■■□□□ 1.4
ERCC1-211ENST00000590701 TOM1O60784 492 aa23.75■■□□□ 1.39
ERCC1-211ENST00000590701 MTUS2Q5JR59 1369 aa23.75■■□□□ 1.39
ERCC1-211ENST00000590701 KIF3BO15066 747 aa23.73■■□□□ 1.39
ERCC1-211ENST00000590701 MBD5Q9P267 1494 aa23.73■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms