RNA–Protein interactions for RNA: ENST00000589828.1

VAT1-207, Transcript of vesicle amine transport 1, humanhuman

TSL 2

Gene VAT1, Length 521 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAT1-207ENST00000589828 ZMYM4Q5VZL5 1548 aa13.63□□□□□ -0.23
VAT1-207ENST00000589828 ZFYVE16Q7Z3T8 1539 aa13.63□□□□□ -0.23
VAT1-207ENST00000589828 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.62□□□□□ -0.23
VAT1-207ENST00000589828 MAGI2Q86UL8 1455 aa13.61□□□□□ -0.23
VAT1-207ENST00000589828 CSRNP3Q8WYN3 585 aa13.6□□□□□ -0.23
VAT1-207ENST00000589828 SCAPERQ9BY12 1400 aa13.6□□□□□ -0.23
VAT1-207ENST00000589828 EFCAB5A4FU69 1503 aa13.59□□□□□ -0.23
VAT1-207ENST00000589828 HECW1Q76N89 1606 aa13.59□□□□□ -0.23
VAT1-207ENST00000589828 ARHGEF12Q9NZN5 1544 aa13.59□□□□□ -0.23
VAT1-207ENST00000589828 TTC37Q6PGP7 1564 aa13.58□□□□□ -0.23
VAT1-207ENST00000589828 MSH5O43196 834 aa13.58□□□□□ -0.24
VAT1-207ENST00000589828 ATP10AO60312 1499 aa13.56□□□□□ -0.24
VAT1-207ENST00000589828 DMRT2Q9Y5R5 561 aa13.56□□□□□ -0.24
VAT1-207ENST00000589828 PLCH2O75038 1416 aa13.56□□□□□ -0.24
VAT1-207ENST00000589828 C9orf84Q5VXU9 1444 aa13.55□□□□□ -0.24
VAT1-207ENST00000589828 CFAP74Q9C0B2 1584 aa13.54□□□□□ -0.24
VAT1-207ENST00000589828 CDK13Q14004 1512 aaKnown RBP13.53□□□□□ -0.24
VAT1-207ENST00000589828 FER1L4A9Z1Z3 1794 aa13.53□□□□□ -0.24
VAT1-207ENST00000589828 UHRF1BP1Q6BDS2 1440 aa13.52□□□□□ -0.25
VAT1-207ENST00000589828 STRCQ7RTU9 1775 aa13.52□□□□□ -0.25
VAT1-207ENST00000589828 PTPRTO14522 1441 aa13.51□□□□□ -0.25
VAT1-207ENST00000589828 AFAP1Q8N556 730 aa13.51□□□□□ -0.25
VAT1-207ENST00000589828 SPATA31D1Q6ZQQ2 1576 aa13.5□□□□□ -0.25
VAT1-207ENST00000589828 EFCAB2Q5VUJ9 269 aa13.5□□□□□ -0.25
VAT1-207ENST00000589828 PREX1Q8TCU6 1659 aa13.49□□□□□ -0.25
VAT1-207ENST00000589828 LTBP4Q8N2S1 1624 aa13.48□□□□□ -0.25
VAT1-207ENST00000589828 ZNF518AQ6AHZ1 1483 aa13.43□□□□□ -0.26
VAT1-207ENST00000589828 NCOA1Q15788 1441 aa13.43□□□□□ -0.26
VAT1-207ENST00000589828 ATP1B4Q9UN42 357 aaPredicted RBP13.43□□□□□ -0.26
VAT1-207ENST00000589828 TRAPPC8Q9Y2L5 1435 aa13.42□□□□□ -0.26
VAT1-207ENST00000589828 MYT1LQ9UL68 1186 aa13.42□□□□□ -0.26
VAT1-207ENST00000589828 KDM5CP41229 1560 aa13.41□□□□□ -0.26
VAT1-207ENST00000589828 DIP2CQ9Y2E4 1556 aa13.41□□□□□ -0.26
VAT1-207ENST00000589828 IQSEC2Q5JU85 1478 aa13.41□□□□□ -0.26
VAT1-207ENST00000589828 ZNF335Q9H4Z2 1342 aaPredicted RBP13.39□□□□□ -0.27
VAT1-207ENST00000589828 EEA1Q15075 1411 aa13.39□□□□□ -0.27
VAT1-207ENST00000589828 NCKAP5LQ9HCH0 1330 aa13.39□□□□□ -0.27
VAT1-207ENST00000589828 MLH3Q9UHC1 1453 aa13.38□□□□□ -0.27
VAT1-207ENST00000589828 UBAP1LF5GYI3 381 aa13.38□□□□□ -0.27
VAT1-207ENST00000589828 KIF14Q15058 1648 aa13.38□□□□□ -0.27
VAT1-207ENST00000589828 TROQ12816 1431 aaPredicted RBP13.38□□□□□ -0.27
VAT1-207ENST00000589828 REREQ9P2R6 1566 aa13.37□□□□□ -0.27
VAT1-207ENST00000589828 ESF1Q9H501 851 aaKnown RBP13.37□□□□□ -0.27
VAT1-207ENST00000589828 CDK11AQ9UQ88 783 aaPredicted RBP13.37□□□□□ -0.27
VAT1-207ENST00000589828 SETD1BQ9UPS6 1966 aaKnown RBP13.37□□□□□ -0.27
VAT1-207ENST00000589828 AGLP35573 1532 aa13.37□□□□□ -0.27
VAT1-207ENST00000589828 ARHGAP5Q13017 1502 aa13.37□□□□□ -0.27
VAT1-207ENST00000589828 C3P01024 1663 aa13.37□□□□□ -0.27
VAT1-207ENST00000589828 ABCA6Q8N139 1617 aa13.35□□□□□ -0.27
VAT1-207ENST00000589828 EHMT2Q96KQ7 1210 aa13.35□□□□□ -0.27
VAT1-207ENST00000589828 ZMYM3Q14202 1370 aa13.33□□□□□ -0.27
VAT1-207ENST00000589828 MYO5CQ9NQX4 1742 aa13.33□□□□□ -0.27
VAT1-207ENST00000589828 FMN1Q68DA7 1419 aa13.33□□□□□ -0.28
VAT1-207ENST00000589828 CNTLNQ9NXG0 1405 aa13.33□□□□□ -0.28
VAT1-207ENST00000589828 CAMSAP1Q5T5Y3 1602 aa13.33□□□□□ -0.28
VAT1-207ENST00000589828 ARHGAP35Q9NRY4 1499 aa13.33□□□□□ -0.28
VAT1-207ENST00000589828 NPATQ14207 1427 aa13.31□□□□□ -0.28
VAT1-207ENST00000589828 CLIP1P30622 1438 aa13.3□□□□□ -0.28
VAT1-207ENST00000589828 ABCC1P33527 1531 aa13.29□□□□□ -0.28
VAT1-207ENST00000589828 UBTFP17480 764 aaKnown RBP13.29□□□□□ -0.28
VAT1-207ENST00000589828 HSPA1LP34931 641 aa13.29□□□□□ -0.28
VAT1-207ENST00000589828 PKD2Q13563 968 aa13.29□□□□□ -0.28
VAT1-207ENST00000589828 TCOF1Q13428 1488 aaKnown RBP13.27□□□□□ -0.29
VAT1-207ENST00000589828 PLA2R1Q13018 1463 aa13.26□□□□□ -0.29
VAT1-207ENST00000589828 PTPRKQ15262 1439 aa13.26□□□□□ -0.29
VAT1-207ENST00000589828 KIDINS220Q9ULH0 1771 aa13.26□□□□□ -0.29
VAT1-207ENST00000589828 CDC42BPBQ9Y5S2 1711 aa13.25□□□□□ -0.29
VAT1-207ENST00000589828 PIP4K2BP78356 416 aa13.25□□□□□ -0.29
VAT1-207ENST00000589828 HNRNPMP52272 730 aaKnown RBP eCLIP13.24□□□□□ -0.29
VAT1-207ENST00000589828 ZNF777Q9ULD5 760 aaPredicted RBP13.24□□□□□ -0.29
VAT1-207ENST00000589828 SAMD9LQ8IVG5 1584 aa13.24□□□□□ -0.29
VAT1-207ENST00000589828 SPAG9O60271 1321 aaKnown RBP13.23□□□□□ -0.29
VAT1-207ENST00000589828 SCAF1Q9H7N4 1312 aaKnown RBP13.23□□□□□ -0.29
VAT1-207ENST00000589828 ITSN2Q9NZM3 1697 aa13.22□□□□□ -0.29
VAT1-207ENST00000589828 PREX2Q70Z35 1606 aa13.22□□□□□ -0.29
VAT1-207ENST00000589828 GGT6Q6P531 493 aa13.22□□□□□ -0.29
VAT1-207ENST00000589828 MED1Q15648 1581 aaPredicted RBP13.22□□□□□ -0.29
VAT1-207ENST00000589828 LRRIQ1Q96JM4 1722 aa13.2□□□□□ -0.3
VAT1-207ENST00000589828 CEP170BQ9Y4F5 1589 aaPredicted RBP13.2□□□□□ -0.3
VAT1-207ENST00000589828 MROH2AA6NES4 1674 aa13.19□□□□□ -0.3
VAT1-207ENST00000589828 SYCP2Q9BX26 1530 aa13.18□□□□□ -0.3
VAT1-207ENST00000589828 GPATCH8Q9UKJ3 1502 aaKnown RBP13.18□□□□□ -0.3
VAT1-207ENST00000589828 A2MP01023 1474 aa13.18□□□□□ -0.3
VAT1-207ENST00000589828 MYO3AQ8NEV4 1616 aa13.18□□□□□ -0.3
VAT1-207ENST00000589828 TOM1O60784 492 aa13.18□□□□□ -0.3
VAT1-207ENST00000589828 CASKIN1Q8WXD9 1431 aa13.18□□□□□ -0.3
VAT1-207ENST00000589828 PPP4R3CPQ6ZMV5 832 aa13.17□□□□□ -0.3
VAT1-207ENST00000589828 ZNF142P52746 1687 aaPredicted RBP13.17□□□□□ -0.3
VAT1-207ENST00000589828 A2ML1A8K2U0 1454 aa13.16□□□□□ -0.3
VAT1-207ENST00000589828 PLXNC1O60486 1568 aa13.16□□□□□ -0.3
VAT1-207ENST00000589828 FBXO31Q5XUX0 539 aaPredicted RBP13.16□□□□□ -0.3
VAT1-207ENST00000589828 CLTCQ00610 1675 aaKnown RBP13.15□□□□□ -0.3
VAT1-207ENST00000589828 ATP7AQ04656 1500 aa13.15□□□□□ -0.3
VAT1-207ENST00000589828 CCDC18Q5T9S5 1454 aa13.15□□□□□ -0.3
VAT1-207ENST00000589828 SHANK2Q9UPX8 1470 aa13.15□□□□□ -0.3
VAT1-207ENST00000589828 KIAA1107Q9UPP5 1409 aa13.14□□□□□ -0.31
VAT1-207ENST00000589828 SUPT6HQ7KZ85 1726 aaKnown RBP13.14□□□□□ -0.31
VAT1-207ENST00000589828 ALKQ9UM73 1620 aa13.13□□□□□ -0.31
VAT1-207ENST00000589828 CDC42BPAQ5VT25 1732 aa13.13□□□□□ -0.31
VAT1-207ENST00000589828 CFDP1Q9UEE9 299 aaPredicted RBP13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms