RNA–Protein interactions for RNA: ENST00000589118.5

SF3A2-204, Transcript of splicing factor 3a subunit 2, humanhuman

TSL 2

Gene SF3A2, Length 759 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A2-204ENST00000589118 ATP1B4Q9UN42 357 aaPredicted RBP25.38■■□□□ 1.65
SF3A2-204ENST00000589118 CEBPAP49715 358 aaPredicted RBP25.37■■□□□ 1.65
SF3A2-204ENST00000589118 CERKQ8TCT0 537 aa25.37■■□□□ 1.65
SF3A2-204ENST00000589118 PLCH2O75038 1416 aa25.33■■□□□ 1.65
SF3A2-204ENST00000589118 EEA1Q15075 1411 aa25.31■■□□□ 1.64
SF3A2-204ENST00000589118 MAGI2Q86UL8 1455 aa25.31■■□□□ 1.64
SF3A2-204ENST00000589118 ATP10AO60312 1499 aa25.28■■□□□ 1.64
SF3A2-204ENST00000589118 KIF14Q15058 1648 aa25.27■■□□□ 1.64
SF3A2-204ENST00000589118 MYO5CQ9NQX4 1742 aa25.27■■□□□ 1.64
SF3A2-204ENST00000589118 ARHGEF12Q9NZN5 1544 aa25.27■■□□□ 1.64
SF3A2-204ENST00000589118 PREX1Q8TCU6 1659 aa25.24■■□□□ 1.63
SF3A2-204ENST00000589118 EFCAB2Q5VUJ9 269 aa25.23■■□□□ 1.63
SF3A2-204ENST00000589118 AFAP1Q8N556 730 aa25.23■■□□□ 1.63
SF3A2-204ENST00000589118 C9orf84Q5VXU9 1444 aa25.22■■□□□ 1.63
SF3A2-204ENST00000589118 STRCQ7RTU9 1775 aa25.22■■□□□ 1.63
SF3A2-204ENST00000589118 UBTFP17480 764 aaKnown RBP25.21■■□□□ 1.63
SF3A2-204ENST00000589118 MYT1LQ9UL68 1186 aa25.2■■□□□ 1.62
SF3A2-204ENST00000589118 LRRIQ1Q96JM4 1722 aa25.19■■□□□ 1.62
SF3A2-204ENST00000589118 ARHGAP35Q9NRY4 1499 aa25.16■■□□□ 1.62
SF3A2-204ENST00000589118 ILDR2Q71H61 639 aa25.15■■□□□ 1.62
SF3A2-204ENST00000589118 ARHGAP5Q13017 1502 aa25.15■■□□□ 1.62
SF3A2-204ENST00000589118 DIP2CQ9Y2E4 1556 aa25.12■■□□□ 1.61
SF3A2-204ENST00000589118 CDC42BPBQ9Y5S2 1711 aa25.12■■□□□ 1.61
SF3A2-204ENST00000589118 ZNF518AQ6AHZ1 1483 aa25.11■■□□□ 1.61
SF3A2-204ENST00000589118 FMN1Q68DA7 1419 aa25.11■■□□□ 1.61
SF3A2-204ENST00000589118 CDK11AQ9UQ88 783 aaPredicted RBP25.1■■□□□ 1.61
SF3A2-204ENST00000589118 KDM5CP41229 1560 aa25.1■■□□□ 1.61
SF3A2-204ENST00000589118 ABCA6Q8N139 1617 aa25.09■■□□□ 1.61
SF3A2-204ENST00000589118 C3P01024 1663 aa25.09■■□□□ 1.61
SF3A2-204ENST00000589118 TROQ12816 1431 aaPredicted RBP25.09■■□□□ 1.61
SF3A2-204ENST00000589118 DISP3Q9P2K9 1392 aa25.08■■□□□ 1.61
SF3A2-204ENST00000589118 UHRF1BP1Q6BDS2 1440 aa25.08■■□□□ 1.61
SF3A2-204ENST00000589118 SETD1BQ9UPS6 1966 aaKnown RBP25.05■■□□□ 1.6
SF3A2-204ENST00000589118 TRAPPC8Q9Y2L5 1435 aa25.05■■□□□ 1.6
SF3A2-204ENST00000589118 DMRT2Q9Y5R5 561 aa25.03■■□□□ 1.6
SF3A2-204ENST00000589118 CLIP1P30622 1438 aa25■■□□□ 1.59
SF3A2-204ENST00000589118 ITSN2Q9NZM3 1697 aa24.98■■□□□ 1.59
SF3A2-204ENST00000589118 MLH3Q9UHC1 1453 aa24.98■■□□□ 1.59
SF3A2-204ENST00000589118 PREX2Q70Z35 1606 aa24.97■■□□□ 1.59
SF3A2-204ENST00000589118 REREQ9P2R6 1566 aa24.97■■□□□ 1.59
SF3A2-204ENST00000589118 KIDINS220Q9ULH0 1771 aa24.97■■□□□ 1.59
SF3A2-204ENST00000589118 ESF1Q9H501 851 aaKnown RBP24.96■■□□□ 1.59
SF3A2-204ENST00000589118 ABCC1P33527 1531 aa24.96■■□□□ 1.59
SF3A2-204ENST00000589118 CDC42BPAQ5VT25 1732 aa24.94■■□□□ 1.58
SF3A2-204ENST00000589118 PTPRTO14522 1441 aa24.94■■□□□ 1.58
SF3A2-204ENST00000589118 LTBP4Q8N2S1 1624 aa24.94■■□□□ 1.58
SF3A2-204ENST00000589118 ZNF777Q9ULD5 760 aaPredicted RBP24.92■■□□□ 1.58
SF3A2-204ENST00000589118 AGLP35573 1532 aa24.91■■□□□ 1.58
SF3A2-204ENST00000589118 SOCS7O14512 581 aa24.9■■□□□ 1.58
SF3A2-204ENST00000589118 CHIC1Q5VXU3 224 aa24.88■■□□□ 1.57
SF3A2-204ENST00000589118 SUPT6HQ7KZ85 1726 aaKnown RBP24.88■■□□□ 1.57
SF3A2-204ENST00000589118 NCKAP5LQ9HCH0 1330 aa24.86■■□□□ 1.57
SF3A2-204ENST00000589118 NCOA1Q15788 1441 aa24.86■■□□□ 1.57
SF3A2-204ENST00000589118 SPATA31D1Q6ZQQ2 1576 aa24.86■■□□□ 1.57
SF3A2-204ENST00000589118 SAMD9LQ8IVG5 1584 aa24.85■■□□□ 1.57
SF3A2-204ENST00000589118 HNRNPMP52272 730 aaKnown RBP eCLIP24.85■■□□□ 1.579e-7■■□□□ 12.9
SF3A2-204ENST00000589118 CAMSAP1Q5T5Y3 1602 aa24.85■■□□□ 1.57
SF3A2-204ENST00000589118 CASKIN1Q8WXD9 1431 aa24.85■■□□□ 1.57
SF3A2-204ENST00000589118 CLTCQ00610 1675 aaKnown RBP24.81■■□□□ 1.56
SF3A2-204ENST00000589118 SYCP2Q9BX26 1530 aa24.81■■□□□ 1.56
SF3A2-204ENST00000589118 ZMYM3Q14202 1370 aa24.8■■□□□ 1.56
SF3A2-204ENST00000589118 CCDC18Q5T9S5 1454 aa24.8■■□□□ 1.56
SF3A2-204ENST00000589118 ZNF335Q9H4Z2 1342 aaPredicted RBP24.8■■□□□ 1.56
SF3A2-204ENST00000589118 CNTLNQ9NXG0 1405 aa24.78■■□□□ 1.56
SF3A2-204ENST00000589118 SPAG9O60271 1321 aaKnown RBP24.78■■□□□ 1.56
SF3A2-204ENST00000589118 MROH2AA6NES4 1674 aa24.78■■□□□ 1.56
SF3A2-204ENST00000589118 GPATCH8Q9UKJ3 1502 aaKnown RBP24.76■■□□□ 1.55
SF3A2-204ENST00000589118 GGT6Q6P531 493 aa24.73■■□□□ 1.55
SF3A2-204ENST00000589118 NPATQ14207 1427 aa24.72■■□□□ 1.55
SF3A2-204ENST00000589118 ATP7AQ04656 1500 aa24.71■■□□□ 1.55
SF3A2-204ENST00000589118 UBAP1LF5GYI3 381 aa24.71■■□□□ 1.55
SF3A2-204ENST00000589118 MYO3AQ8NEV4 1616 aa24.71■■□□□ 1.55
SF3A2-204ENST00000589118 IQSEC2Q5JU85 1478 aa24.7■■□□□ 1.55
SF3A2-204ENST00000589118 FYCO1Q9BQS8 1478 aa24.69■■□□□ 1.54
SF3A2-204ENST00000589118 INO80Q9ULG1 1556 aaPredicted RBP24.67■■□□□ 1.54
SF3A2-204ENST00000589118 A2MP01023 1474 aa24.67■■□□□ 1.54
SF3A2-204ENST00000589118 CFDP1Q9UEE9 299 aaPredicted RBP24.67■■□□□ 1.54
SF3A2-204ENST00000589118 PTPRKQ15262 1439 aa24.67■■□□□ 1.54
SF3A2-204ENST00000589118 ZNF644Q9H582 1327 aaPredicted RBP24.66■■□□□ 1.54
SF3A2-204ENST00000589118 PLXNC1O60486 1568 aa24.66■■□□□ 1.54
SF3A2-204ENST00000589118 ZNF142P52746 1687 aaPredicted RBP24.66■■□□□ 1.54
SF3A2-204ENST00000589118 CEP170BQ9Y4F5 1589 aaPredicted RBP24.65■■□□□ 1.54
SF3A2-204ENST00000589118 CCNB3Q8WWL7 1395 aa24.62■■□□□ 1.53
SF3A2-204ENST00000589118 TCOF1Q13428 1488 aaKnown RBP24.6■■□□□ 1.53
SF3A2-204ENST00000589118 PKD2Q13563 968 aa24.6■■□□□ 1.53
SF3A2-204ENST00000589118 KIAA1107Q9UPP5 1409 aa24.6■■□□□ 1.53
SF3A2-204ENST00000589118 PLA2R1Q13018 1463 aa24.58■■□□□ 1.53
SF3A2-204ENST00000589118 ADGBQ8N7X0 1667 aa24.57■■□□□ 1.52
SF3A2-204ENST00000589118 FBXO31Q5XUX0 539 aaPredicted RBP24.57■■□□□ 1.52
SF3A2-204ENST00000589118 PPP6R1Q9UPN7 881 aa24.57■■□□□ 1.52
SF3A2-204ENST00000589118 DNMT1P26358 1616 aaKnown RBP24.56■■□□□ 1.52
SF3A2-204ENST00000589118 PLEKHH2Q8IVE3 1493 aa24.56■■□□□ 1.52
SF3A2-204ENST00000589118 SCAF1Q9H7N4 1312 aaKnown RBP24.56■■□□□ 1.52
SF3A2-204ENST00000589118 PIP4K2BP78356 416 aa24.54■■□□□ 1.52
SF3A2-204ENST00000589118 MTUS2Q5JR59 1369 aa24.54■■□□□ 1.52
SF3A2-204ENST00000589118 TIAM1Q13009 1591 aa24.53■■□□□ 1.52
SF3A2-204ENST00000589118 HSPA1LP34931 641 aa24.51■■□□□ 1.51
SF3A2-204ENST00000589118 A2ML1A8K2U0 1454 aa24.51■■□□□ 1.51
SF3A2-204ENST00000589118 MBD5Q9P267 1494 aa24.51■■□□□ 1.51
SF3A2-204ENST00000589118 POLR1AO95602 1720 aaPredicted RBP24.48■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms