RNA–Protein interactions for RNA: ENST00000588274.1

CLPTM1-208, Transcript of CLPTM1, transmembrane protein, humanhuman

TSL 2

Gene CLPTM1, Length 805 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-208ENST00000588274 MYO5CQ9NQX4 1742 aa23.16■■□□□ 1.3
CLPTM1-208ENST00000588274 ARHGEF12Q9NZN5 1544 aa23.15■■□□□ 1.3
CLPTM1-208ENST00000588274 LRRIQ1Q96JM4 1722 aa23.15■■□□□ 1.3
CLPTM1-208ENST00000588274 FMN1Q68DA7 1419 aa23.15■■□□□ 1.3
CLPTM1-208ENST00000588274 FER1L4A9Z1Z3 1794 aa23.14■■□□□ 1.3
CLPTM1-208ENST00000588274 KDM5CP41229 1560 aa23.12■■□□□ 1.29
CLPTM1-208ENST00000588274 ATP10AO60312 1499 aa23.09■■□□□ 1.29
CLPTM1-208ENST00000588274 TROQ12816 1431 aaPredicted RBP23.08■■□□□ 1.29
CLPTM1-208ENST00000588274 C9orf84Q5VXU9 1444 aa23.08■■□□□ 1.29
CLPTM1-208ENST00000588274 HSPA2P54652 639 aa23.07■■□□□ 1.28
CLPTM1-208ENST00000588274 ZNF518AQ6AHZ1 1483 aa23.05■■□□□ 1.28
CLPTM1-208ENST00000588274 DIP2CQ9Y2E4 1556 aa23.04■■□□□ 1.28
CLPTM1-208ENST00000588274 REREQ9P2R6 1566 aa23.02■■□□□ 1.28
CLPTM1-208ENST00000588274 CDC42BPBQ9Y5S2 1711 aa23.02■■□□□ 1.28
CLPTM1-208ENST00000588274 PREX1Q8TCU6 1659 aa23.01■■□□□ 1.27
CLPTM1-208ENST00000588274 ARHGAP5Q13017 1502 aa23.01■■□□□ 1.27
CLPTM1-208ENST00000588274 ABCA6Q8N139 1617 aa23■■□□□ 1.27
CLPTM1-208ENST00000588274 EFCAB2Q5VUJ9 269 aa23■■□□□ 1.27
CLPTM1-208ENST00000588274 UBTFP17480 764 aaKnown RBP22.99■■□□□ 1.27
CLPTM1-208ENST00000588274 MLECQ14165 292 aa22.99■■□□□ 1.27
CLPTM1-208ENST00000588274 EHMT2Q96KQ7 1210 aa22.99■■□□□ 1.27
CLPTM1-208ENST00000588274 PREX2Q70Z35 1606 aa22.99■■□□□ 1.27
CLPTM1-208ENST00000588274 ABCC1P33527 1531 aa22.98■■□□□ 1.27
CLPTM1-208ENST00000588274 CHIC1Q5VXU3 224 aa22.96■■□□□ 1.27
CLPTM1-208ENST00000588274 CLIP1P30622 1438 aa22.96■■□□□ 1.27
CLPTM1-208ENST00000588274 PLPPR3Q6T4P5 718 aa22.95■■□□□ 1.26
CLPTM1-208ENST00000588274 MLH3Q9UHC1 1453 aa22.95■■□□□ 1.26
CLPTM1-208ENST00000588274 AFAP1Q8N556 730 aa22.94■■□□□ 1.26
CLPTM1-208ENST00000588274 CDK11AQ9UQ88 783 aaPredicted RBP22.94■■□□□ 1.26
CLPTM1-208ENST00000588274 ITSN2Q9NZM3 1697 aa22.93■■□□□ 1.26
CLPTM1-208ENST00000588274 ATP1B4Q9UN42 357 aaPredicted RBP22.93■■□□□ 1.26
CLPTM1-208ENST00000588274 CASKIN1Q8WXD9 1431 aa22.92■■□□□ 1.26
CLPTM1-208ENST00000588274 TRAPPC8Q9Y2L5 1435 aa22.92■■□□□ 1.26
CLPTM1-208ENST00000588274 STRCQ7RTU9 1775 aa22.92■■□□□ 1.26
CLPTM1-208ENST00000588274 AGLP35573 1532 aa22.92■■□□□ 1.26
CLPTM1-208ENST00000588274 CCDC18Q5T9S5 1454 aa22.91■■□□□ 1.26
CLPTM1-208ENST00000588274 CEBPAP49715 358 aaPredicted RBP22.9■■□□□ 1.26
CLPTM1-208ENST00000588274 KIDINS220Q9ULH0 1771 aa22.89■■□□□ 1.25
CLPTM1-208ENST00000588274 CDC42BPAQ5VT25 1732 aa22.88■■□□□ 1.25
CLPTM1-208ENST00000588274 C3P01024 1663 aa22.88■■□□□ 1.25
CLPTM1-208ENST00000588274 CERKQ8TCT0 537 aa22.85■■□□□ 1.25
CLPTM1-208ENST00000588274 FYCO1Q9BQS8 1478 aa22.84■■□□□ 1.25
CLPTM1-208ENST00000588274 SAMD9LQ8IVG5 1584 aa22.83■■□□□ 1.25
CLPTM1-208ENST00000588274 UHRF1BP1Q6BDS2 1440 aa22.82■■□□□ 1.24
CLPTM1-208ENST00000588274 SYCP2Q9BX26 1530 aa22.77■■□□□ 1.24
CLPTM1-208ENST00000588274 SETD1BQ9UPS6 1966 aaKnown RBP22.77■■□□□ 1.24
CLPTM1-208ENST00000588274 GPATCH8Q9UKJ3 1502 aaKnown RBP22.76■■□□□ 1.23
CLPTM1-208ENST00000588274 PLXNC1O60486 1568 aa22.75■■□□□ 1.23
CLPTM1-208ENST00000588274 INO80Q9ULG1 1556 aaPredicted RBP22.74■■□□□ 1.23
CLPTM1-208ENST00000588274 MROH2AA6NES4 1674 aa22.74■■□□□ 1.23
CLPTM1-208ENST00000588274 PTPRTO14522 1441 aa22.73■■□□□ 1.23
CLPTM1-208ENST00000588274 CNTLNQ9NXG0 1405 aa22.72■■□□□ 1.23
CLPTM1-208ENST00000588274 LTBP4Q8N2S1 1624 aa22.71■■□□□ 1.23
CLPTM1-208ENST00000588274 NCOA1Q15788 1441 aa22.7■■□□□ 1.22
CLPTM1-208ENST00000588274 ATP7AQ04656 1500 aa22.69■■□□□ 1.22
CLPTM1-208ENST00000588274 NPATQ14207 1427 aa22.67■■□□□ 1.22
CLPTM1-208ENST00000588274 KIAA1107Q9UPP5 1409 aa22.67■■□□□ 1.22
CLPTM1-208ENST00000588274 MYT1LQ9UL68 1186 aa22.67■■□□□ 1.22
CLPTM1-208ENST00000588274 DMRT2Q9Y5R5 561 aa22.65■■□□□ 1.22
CLPTM1-208ENST00000588274 SUPT6HQ7KZ85 1726 aaKnown RBP22.64■■□□□ 1.21
CLPTM1-208ENST00000588274 ZNF142P52746 1687 aaPredicted RBP22.63■■□□□ 1.21
CLPTM1-208ENST00000588274 MYO3AQ8NEV4 1616 aa22.62■■□□□ 1.21
CLPTM1-208ENST00000588274 TIAM1Q13009 1591 aa22.62■■□□□ 1.21
CLPTM1-208ENST00000588274 PLEKHH2Q8IVE3 1493 aa22.61■■□□□ 1.21
CLPTM1-208ENST00000588274 CAMSAP1Q5T5Y3 1602 aa22.61■■□□□ 1.21
CLPTM1-208ENST00000588274 CLTCQ00610 1675 aaKnown RBP22.61■■□□□ 1.21
CLPTM1-208ENST00000588274 A2MP01023 1474 aa22.6■■□□□ 1.21
CLPTM1-208ENST00000588274 SPAG9O60271 1321 aaKnown RBP22.6■■□□□ 1.21
CLPTM1-208ENST00000588274 HNRNPMP52272 730 aaKnown RBP eCLIP22.6■■□□□ 1.21
CLPTM1-208ENST00000588274 ZNF777Q9ULD5 760 aaPredicted RBP22.59■■□□□ 1.21
CLPTM1-208ENST00000588274 ZMYM3Q14202 1370 aa22.59■■□□□ 1.21
CLPTM1-208ENST00000588274 IQSEC2Q5JU85 1478 aa22.58■■□□□ 1.2
CLPTM1-208ENST00000588274 MBD5Q9P267 1494 aa22.58■■□□□ 1.2
CLPTM1-208ENST00000588274 PTPRKQ15262 1439 aa22.57■■□□□ 1.2
CLPTM1-208ENST00000588274 ADGBQ8N7X0 1667 aa22.55■■□□□ 1.2
CLPTM1-208ENST00000588274 CCNB3Q8WWL7 1395 aa22.55■■□□□ 1.2
CLPTM1-208ENST00000588274 ESF1Q9H501 851 aaKnown RBP22.55■■□□□ 1.2
CLPTM1-208ENST00000588274 EHBP1L1Q8N3D4 1523 aa22.55■■□□□ 1.2
CLPTM1-208ENST00000588274 CEP170BQ9Y4F5 1589 aaPredicted RBP22.55■■□□□ 1.2
CLPTM1-208ENST00000588274 PLA2R1Q13018 1463 aa22.54■■□□□ 1.2
CLPTM1-208ENST00000588274 TCOF1Q13428 1488 aaKnown RBP22.54■■□□□ 1.2
CLPTM1-208ENST00000588274 CFDP1Q9UEE9 299 aaPredicted RBP22.53■■□□□ 1.2
CLPTM1-208ENST00000588274 ZNF644Q9H582 1327 aaPredicted RBP22.51■■□□□ 1.19
CLPTM1-208ENST00000588274 MTUS2Q5JR59 1369 aa22.5■■□□□ 1.19
CLPTM1-208ENST00000588274 CEP162Q5TB80 1403 aa22.5■■□□□ 1.19
CLPTM1-208ENST00000588274 ILDR2Q71H61 639 aa22.47■■□□□ 1.19
CLPTM1-208ENST00000588274 RTEL1-TNFRSF6BF6WH68 1400 aa22.47■■□□□ 1.19
CLPTM1-208ENST00000588274 SPATA31D1Q6ZQQ2 1576 aa22.46■■□□□ 1.19
CLPTM1-208ENST00000588274 NCKAP5LQ9HCH0 1330 aa22.45■■□□□ 1.18
CLPTM1-208ENST00000588274 ZNF335Q9H4Z2 1342 aaPredicted RBP22.44■■□□□ 1.18
CLPTM1-208ENST00000588274 DISP3Q9P2K9 1392 aa22.44■■□□□ 1.18
CLPTM1-208ENST00000588274 DNMT1P26358 1616 aaKnown RBP22.43■■□□□ 1.18
CLPTM1-208ENST00000588274 A2ML1A8K2U0 1454 aa22.41■■□□□ 1.18
CLPTM1-208ENST00000588274 GGT6Q6P531 493 aa22.41■■□□□ 1.18
CLPTM1-208ENST00000588274 NEURL4Q96JN8 1562 aa22.41■■□□□ 1.18
CLPTM1-208ENST00000588274 DHX29Q7Z478 1369 aaKnown RBP22.4■■□□□ 1.18
CLPTM1-208ENST00000588274 FAM135AQ9P2D6 1515 aa22.4■■□□□ 1.18
CLPTM1-208ENST00000588274 CAMSAP2Q08AD1 1489 aa22.4■■□□□ 1.18
CLPTM1-208ENST00000588274 NCOA2Q15596 1464 aa22.4■■□□□ 1.18
CLPTM1-208ENST00000588274 CCDC141Q6ZP82 1450 aa22.4■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms