RNA–Protein interactions for RNA: ENST00000587605.5

MBD1-216, Transcript of methyl-CpG binding domain protein 1, humanhuman

TSL 2 BASIC

Gene MBD1, Length 1,945 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-216ENST00000587605 ERCC6Q03468 1493 aa27.87■■■□□ 2.05
MBD1-216ENST00000587605 HIRIP3Q9BW71 556 aaPredicted RBP27.86■■■□□ 2.05
MBD1-216ENST00000587605 CEP170Q5SW79 1584 aa27.85■■■□□ 2.05
MBD1-216ENST00000587605 CARMIL2Q6F5E8 1435 aa27.82■■■□□ 2.04
MBD1-216ENST00000587605 ADGBQ8N7X0 1667 aa27.81■■■□□ 2.04
MBD1-216ENST00000587605 RPRD2Q5VT52 1461 aaKnown RBP27.8■■■□□ 2.04
MBD1-216ENST00000587605 NUP160Q12769 1436 aa27.79■■■□□ 2.04
MBD1-216ENST00000587605 ANKRD30BQ9BXX2 1392 aa27.78■■■□□ 2.04
MBD1-216ENST00000587605 ARID3CA6NKF2 412 aa27.78■■■□□ 2.04
MBD1-216ENST00000587605 CHMP7Q8WUX9 453 aaPredicted RBP27.77■■■□□ 2.04
MBD1-216ENST00000587605 CAMSAP2Q08AD1 1489 aa27.77■■■□□ 2.04
MBD1-216ENST00000587605 EIF4G2P78344 907 aaKnown RBP eCLIP27.76■■■□□ 2.03
MBD1-216ENST00000587605 ADGRL2O95490 1459 aa27.74■■■□□ 2.03
MBD1-216ENST00000587605 CROCC2H7BZ55 1655 aa27.74■■■□□ 2.03
MBD1-216ENST00000587605 HSPA5P11021 654 aaKnown RBP27.73■■■□□ 2.03
MBD1-216ENST00000587605 PRG4Q92954 1404 aaPredicted RBP27.72■■■□□ 2.03
MBD1-216ENST00000587605 GPATCH8Q9UKJ3 1502 aaKnown RBP27.72■■■□□ 2.03
MBD1-216ENST00000587605 PLB1Q6P1J6 1458 aa27.7■■■□□ 2.03
MBD1-216ENST00000587605 TEX14Q8IWB6 1497 aa27.7■■■□□ 2.03
MBD1-216ENST00000587605 L3MBTL2Q969R5 705 aa27.69■■■□□ 2.02
MBD1-216ENST00000587605 MYT1Q01538 1121 aa27.69■■■□□ 2.02
MBD1-216ENST00000587605 CFDP1Q9UEE9 299 aaPredicted RBP27.69■■■□□ 2.02
MBD1-216ENST00000587605 ZNF644Q9H582 1327 aaPredicted RBP27.67■■■□□ 2.02
MBD1-216ENST00000587605 NCOA1Q15788 1441 aa27.67■■■□□ 2.02
MBD1-216ENST00000587605 KIF14Q15058 1648 aa27.66■■■□□ 2.02
MBD1-216ENST00000587605 WASHC2AQ641Q2 1341 aa27.66■■■□□ 2.02
MBD1-216ENST00000587605 ABCA8O94911 1581 aa27.66■■■□□ 2.02
MBD1-216ENST00000587605 CNTLNQ9NXG0 1405 aa27.65■■■□□ 2.02
MBD1-216ENST00000587605 PZPP20742 1482 aa27.64■■■□□ 2.01
MBD1-216ENST00000587605 JPH4Q96JJ6 628 aa27.63■■■□□ 2.01
MBD1-216ENST00000587605 SLC4A1APQ9BWU0 796 aaKnown RBP27.63■■■□□ 2.01
MBD1-216ENST00000587605 POLR1AO95602 1720 aaPredicted RBP27.62■■■□□ 2.01
MBD1-216ENST00000587605 SHANK2Q9UPX8 1470 aa27.61■■■□□ 2.01
MBD1-216ENST00000587605 NEFLP07196 543 aa27.61■■■□□ 2.01
MBD1-216ENST00000587605 ANKRD30AQ9BXX3 1397 aa27.61■■■□□ 2.01
MBD1-216ENST00000587605 CCDC7Q96M83 1385 aa27.57■■■□□ 2
MBD1-216ENST00000587605 CDC42BPAQ5VT25 1732 aa27.57■■■□□ 2
MBD1-216ENST00000587605 FOXD1Q16676 465 aa27.57■■■□□ 2
MBD1-216ENST00000587605 KIAA1107Q9UPP5 1409 aa27.56■■■□□ 2
MBD1-216ENST00000587605 ABCC10Q5T3U5 1492 aa27.55■■■□□ 2
MBD1-216ENST00000587605 FKBP8Q14318 412 aa27.53■■■□□ 2
MBD1-216ENST00000587605 SPATA31E1Q6ZUB1 1445 aa27.53■■■□□ 2
MBD1-216ENST00000587605 PLEKHD1A6NEE1 506 aa27.53■■■□□ 2
MBD1-216ENST00000587605 FBLN2P98095 1184 aa27.53■■■□□ 2
MBD1-216ENST00000587605 MBD5Q9P267 1494 aa27.52■■■□□ 2
MBD1-216ENST00000587605 ATP10BO94823 1461 aa27.5■■□□□ 1.99
MBD1-216ENST00000587605 NBPF8Q3BBV2 869 aa27.49■■□□□ 1.99
MBD1-216ENST00000587605 ANKRD50Q9ULJ7 1429 aa27.49■■□□□ 1.99
MBD1-216ENST00000587605 KDM5DQ9BY66 1539 aa27.48■■□□□ 1.99
MBD1-216ENST00000587605 ARHGEF5Q12774 1597 aa27.47■■□□□ 1.99
MBD1-216ENST00000587605 ZNF777Q9ULD5 760 aaPredicted RBP27.45■■□□□ 1.98
MBD1-216ENST00000587605 C9orf84Q5VXU9 1444 aa27.44■■□□□ 1.98
MBD1-216ENST00000587605 TSHZ2Q9NRE2 1034 aa27.43■■□□□ 1.98
MBD1-216ENST00000587605 HNRNPUQ00839 825 aaKnown RBP eCLIP27.39■■□□□ 1.98
MBD1-216ENST00000587605 ARHGEF12Q9NZN5 1544 aa27.39■■□□□ 1.98
MBD1-216ENST00000587605 C11orf95C9JLR9 678 aaPredicted RBP27.38■■□□□ 1.97
MBD1-216ENST00000587605 PRKRIP1Q9H875 184 aaPredicted RBP27.38■■□□□ 1.97
MBD1-216ENST00000587605 UHRF1BP1Q6BDS2 1440 aa27.38■■□□□ 1.97
MBD1-216ENST00000587605 PKD2Q13563 968 aa27.37■■□□□ 1.97
MBD1-216ENST00000587605 KIF7Q2M1P5 1343 aa27.37■■□□□ 1.97
MBD1-216ENST00000587605 ARID4BQ4LE39 1312 aaPredicted RBP27.37■■□□□ 1.97
MBD1-216ENST00000587605 PTPRGP23470 1445 aa27.35■■□□□ 1.97
MBD1-216ENST00000587605 TSPY4P0CV99 314 aa27.35■■□□□ 1.97
MBD1-216ENST00000587605 TSPY10P0CW01 314 aa27.35■■□□□ 1.97
MBD1-216ENST00000587605 PREX2Q70Z35 1606 aa27.34■■□□□ 1.97
MBD1-216ENST00000587605 BCANQ96GW7 911 aa27.32■■□□□ 1.96
MBD1-216ENST00000587605 RALGAPBQ86X10 1494 aa27.32■■□□□ 1.96
MBD1-216ENST00000587605 RSPH4AQ5TD94 716 aa27.31■■□□□ 1.96
MBD1-216ENST00000587605 NUP155O75694 1391 aa27.31■■□□□ 1.96
MBD1-216ENST00000587605 KDM5CP41229 1560 aa27.3■■□□□ 1.96
MBD1-216ENST00000587605 CCDC141Q6ZP82 1450 aa27.3■■□□□ 1.96
MBD1-216ENST00000587605 USP47Q96K76 1375 aa27.29■■□□□ 1.96
MBD1-216ENST00000587605 KIF15Q9NS87 1388 aa27.28■■□□□ 1.96
MBD1-216ENST00000587605 ERICH6BQ5W0A0 696 aa27.28■■□□□ 1.96
MBD1-216ENST00000587605 CDC42BPBQ9Y5S2 1711 aa27.26■■□□□ 1.95
MBD1-216ENST00000587605 SHROOM2Q13796 1616 aa27.26■■□□□ 1.95
MBD1-216ENST00000587605 SAMD9LQ8IVG5 1584 aa27.25■■□□□ 1.95
MBD1-216ENST00000587605 ROCK2O75116 1388 aaKnown RBP27.25■■□□□ 1.95
MBD1-216ENST00000587605 MAST1Q9Y2H9 1570 aa27.25■■□□□ 1.95
MBD1-216ENST00000587605 MRS2Q9HD23 443 aa27.23■■□□□ 1.95
MBD1-216ENST00000587605 BCORL1Q5H9F3 1711 aa27.22■■□□□ 1.95
MBD1-216ENST00000587605 ZBED9Q6R2W3 1325 aa27.21■■□□□ 1.95
MBD1-216ENST00000587605 CHD1O14646 1710 aa27.21■■□□□ 1.95
MBD1-216ENST00000587605 DHX29Q7Z478 1369 aaKnown RBP27.18■■□□□ 1.94
MBD1-216ENST00000587605 PLEKHH2Q8IVE3 1493 aa27.17■■□□□ 1.94
MBD1-216ENST00000587605 HNRNPMP52272 730 aaKnown RBP eCLIP27.16■■□□□ 1.94
MBD1-216ENST00000587605 CCDC184Q52MB2 194 aa27.16■■□□□ 1.94
MBD1-216ENST00000587605 FAM135AQ9P2D6 1515 aa27.16■■□□□ 1.94
MBD1-216ENST00000587605 UNC13BO14795 1591 aa27.15■■□□□ 1.94
MBD1-216ENST00000587605 PLXNC1O60486 1568 aa27.13■■□□□ 1.93
MBD1-216ENST00000587605 ABCC2Q92887 1545 aa27.11■■□□□ 1.93
MBD1-216ENST00000587605 ZNF326Q5BKZ1 582 aaKnown RBP27.11■■□□□ 1.93
MBD1-216ENST00000587605 MYO5CQ9NQX4 1742 aa27.11■■□□□ 1.93
MBD1-216ENST00000587605 FAM9BQ8IZU0 186 aa27.1■■□□□ 1.93
MBD1-216ENST00000587605 ARHGAP5Q13017 1502 aa27.1■■□□□ 1.93
MBD1-216ENST00000587605 TTC37Q6PGP7 1564 aa27.09■■□□□ 1.93
MBD1-216ENST00000587605 SYCP2Q9BX26 1530 aa27.09■■□□□ 1.93
MBD1-216ENST00000587605 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP27.08■■□□□ 1.93
MBD1-216ENST00000587605 CARD11Q9BXL7 1154 aa27.08■■□□□ 1.93
MBD1-216ENST00000587605 KTN1Q86UP2 1357 aaKnown RBP27.07■■□□□ 1.92
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms