RNA–Protein interactions for RNA: ENST00000585931.5

LDLRAD4-205, Transcript of low density lipoprotein receptor class A domain containing 4, humanhuman

TSL 1 (best) BASIC

Gene LDLRAD4, Length 2,118 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAD4-205ENST00000585931 CDC42BPAQ5VT25 1732 aa22.18■■□□□ 1.14
LDLRAD4-205ENST00000585931 CAMSAP2Q08AD1 1489 aa22.18■■□□□ 1.14
LDLRAD4-205ENST00000585931 DNMT1P26358 1616 aaKnown RBP22.18■■□□□ 1.14
LDLRAD4-205ENST00000585931 UHRF1BP1LA0JNW5 1464 aa22.16■■□□□ 1.14
LDLRAD4-205ENST00000585931 AKNAQ7Z591 1439 aa22.15■■□□□ 1.14
LDLRAD4-205ENST00000585931 GCC2Q8IWJ2 1684 aa22.12■■□□□ 1.13
LDLRAD4-205ENST00000585931 KDM5BQ9UGL1 1544 aa22.11■■□□□ 1.13
LDLRAD4-205ENST00000585931 ROCK1Q13464 1354 aa22.11■■□□□ 1.13
LDLRAD4-205ENST00000585931 ZCCHC11Q5TAX3 1644 aaKnown RBP22.11■■□□□ 1.13
LDLRAD4-205ENST00000585931 KDM6BO15054 1643 aa22.09■■□□□ 1.13
LDLRAD4-205ENST00000585931 KCNH8Q96L42 1107 aa22.07■■□□□ 1.12
LDLRAD4-205ENST00000585931 SIN3AQ96ST3 1273 aa22.07■■□□□ 1.12
LDLRAD4-205ENST00000585931 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP22.07■■□□□ 1.12
LDLRAD4-205ENST00000585931 CDC42BPBQ9Y5S2 1711 aa22.06■■□□□ 1.12
LDLRAD4-205ENST00000585931 TTC37Q6PGP7 1564 aa22.05■■□□□ 1.12
LDLRAD4-205ENST00000585931 PREX2Q70Z35 1606 aa22.03■■□□□ 1.12
LDLRAD4-205ENST00000585931 NCOA1Q15788 1441 aa22.02■■□□□ 1.12
LDLRAD4-205ENST00000585931 NEUROD1Q13562 356 aa22.02■■□□□ 1.12
LDLRAD4-205ENST00000585931 ZNF316A6NFI3 1004 aaPredicted RBP22.01■■□□□ 1.11
LDLRAD4-205ENST00000585931 CROCC2H7BZ55 1655 aa22.01■■□□□ 1.11
LDLRAD4-205ENST00000585931 HNRNPMP52272 730 aaKnown RBP eCLIP22.01■■□□□ 1.11
LDLRAD4-205ENST00000585931 TRIM52Q96A61 297 aa22.01■■□□□ 1.11
LDLRAD4-205ENST00000585931 SAMD9LQ8IVG5 1584 aa21.99■■□□□ 1.11
LDLRAD4-205ENST00000585931 ADGRL2O95490 1459 aa21.98■■□□□ 1.11
LDLRAD4-205ENST00000585931 MBD5Q9P267 1494 aa21.98■■□□□ 1.11
LDLRAD4-205ENST00000585931 ADGBQ8N7X0 1667 aa21.97■■□□□ 1.11
LDLRAD4-205ENST00000585931 ARHGAP5Q13017 1502 aa21.96■■□□□ 1.11
LDLRAD4-205ENST00000585931 DENND4BO75064 1496 aaPredicted RBP21.95■■□□□ 1.11
LDLRAD4-205ENST00000585931 ANKRD30AQ9BXX3 1397 aa21.95■■□□□ 1.1
LDLRAD4-205ENST00000585931 MYO5CQ9NQX4 1742 aa21.95■■□□□ 1.1
LDLRAD4-205ENST00000585931 TSPY4P0CV99 314 aa21.94■■□□□ 1.1
LDLRAD4-205ENST00000585931 TSPY10P0CW01 314 aa21.94■■□□□ 1.1
LDLRAD4-205ENST00000585931 C9orf84Q5VXU9 1444 aa21.94■■□□□ 1.1
LDLRAD4-205ENST00000585931 ARHGEF5Q12774 1597 aa21.94■■□□□ 1.1
LDLRAD4-205ENST00000585931 SHANK2Q9UPX8 1470 aa21.94■■□□□ 1.1
LDLRAD4-205ENST00000585931 MPHOSPH9Q99550 1183 aa21.94■■□□□ 1.1
LDLRAD4-205ENST00000585931 PLCH2O75038 1416 aa21.92■■□□□ 1.1
LDLRAD4-205ENST00000585931 TIMELESSQ9UNS1 1208 aa21.91■■□□□ 1.1
LDLRAD4-205ENST00000585931 WDR7Q9Y4E6 1490 aa21.9■■□□□ 1.1
LDLRAD4-205ENST00000585931 RSPH4AQ5TD94 716 aa21.9■■□□□ 1.1
LDLRAD4-205ENST00000585931 ACIN1Q9UKV3 1341 aaKnown RBP21.89■■□□□ 1.1
LDLRAD4-205ENST00000585931 CCDC141Q6ZP82 1450 aa21.89■■□□□ 1.1
LDLRAD4-205ENST00000585931 SYCP2Q9BX26 1530 aa21.89■■□□□ 1.1
LDLRAD4-205ENST00000585931 DIEXFQ68CQ4 756 aaKnown RBP21.88■■□□□ 1.09
LDLRAD4-205ENST00000585931 ANKRD50Q9ULJ7 1429 aa21.87■■□□□ 1.09
LDLRAD4-205ENST00000585931 KIAA1107Q9UPP5 1409 aa21.85■■□□□ 1.09
LDLRAD4-205ENST00000585931 FOXD1Q16676 465 aa21.85■■□□□ 1.09
LDLRAD4-205ENST00000585931 EFCAB2Q5VUJ9 269 aa21.85■■□□□ 1.09
LDLRAD4-205ENST00000585931 ASXL2Q76L83 1435 aa21.85■■□□□ 1.09
LDLRAD4-205ENST00000585931 ARHGEF12Q9NZN5 1544 aa21.84■■□□□ 1.09
LDLRAD4-205ENST00000585931 PLEKHH2Q8IVE3 1493 aa21.83■■□□□ 1.09
LDLRAD4-205ENST00000585931 SLC4A1APQ9BWU0 796 aaKnown RBP21.82■■□□□ 1.08
LDLRAD4-205ENST00000585931 KIF15Q9NS87 1388 aa21.82■■□□□ 1.08
LDLRAD4-205ENST00000585931 PPP1R15AO75807 674 aaPredicted RBP21.82■■□□□ 1.08
LDLRAD4-205ENST00000585931 NPM1P06748 294 aaKnown RBP eCLIP21.82■■□□□ 1.08
LDLRAD4-205ENST00000585931 TONSLQ96HA7 1378 aa21.8■■□□□ 1.08
LDLRAD4-205ENST00000585931 SCAF1Q9H7N4 1312 aaKnown RBP21.8■■□□□ 1.08
LDLRAD4-205ENST00000585931 PZPP20742 1482 aa21.8■■□□□ 1.08
LDLRAD4-205ENST00000585931 ABCA9Q8IUA7 1624 aa21.78■■□□□ 1.08
LDLRAD4-205ENST00000585931 ARAP3Q8WWN8 1544 aa21.78■■□□□ 1.08
LDLRAD4-205ENST00000585931 MAST1Q9Y2H9 1570 aa21.77■■□□□ 1.08
LDLRAD4-205ENST00000585931 ANKRD30BQ9BXX2 1392 aa21.76■■□□□ 1.07
LDLRAD4-205ENST00000585931 ABCC1P33527 1531 aa21.76■■□□□ 1.07
LDLRAD4-205ENST00000585931 TRAPPC8Q9Y2L5 1435 aa21.74■■□□□ 1.07
LDLRAD4-205ENST00000585931 NUP155O75694 1391 aa21.73■■□□□ 1.07
LDLRAD4-205ENST00000585931 FANCAO15360 1455 aa21.71■■□□□ 1.07
LDLRAD4-205ENST00000585931 PKD2Q13563 968 aa21.7■■□□□ 1.06
LDLRAD4-205ENST00000585931 AFAP1Q8N556 730 aa21.7■■□□□ 1.06
LDLRAD4-205ENST00000585931 CYB5RLQ6IPT4 315 aa21.69■■□□□ 1.06
LDLRAD4-205ENST00000585931 PLXNC1O60486 1568 aa21.68■■□□□ 1.06
LDLRAD4-205ENST00000585931 KDM5DQ9BY66 1539 aa21.66■■□□□ 1.06
LDLRAD4-205ENST00000585931 RPRD2Q5VT52 1461 aaKnown RBP21.66■■□□□ 1.06
LDLRAD4-205ENST00000585931 RIMBP3CA6NJZ7 1639 aa21.64■■□□□ 1.05
LDLRAD4-205ENST00000585931 RIMBP3BA6NNM3 1639 aa21.64■■□□□ 1.05
LDLRAD4-205ENST00000585931 RIMBP3Q9UFD9 1639 aa21.64■■□□□ 1.05
LDLRAD4-205ENST00000585931 L3MBTL2Q969R5 705 aa21.64■■□□□ 1.05
LDLRAD4-205ENST00000585931 SPAG9O60271 1321 aaKnown RBP21.63■■□□□ 1.05
LDLRAD4-205ENST00000585931 DUOX2Q9NRD8 1548 aa21.63■■□□□ 1.05
LDLRAD4-205ENST00000585931 ADGRL1O94910 1474 aa21.62■■□□□ 1.05
LDLRAD4-205ENST00000585931 SCAPERQ9BY12 1400 aa21.62■■□□□ 1.05
LDLRAD4-205ENST00000585931 CD109Q6YHK3 1445 aa21.61■■□□□ 1.05
LDLRAD4-205ENST00000585931 RTEL1-TNFRSF6BF6WH68 1400 aa21.6■■□□□ 1.05
LDLRAD4-205ENST00000585931 FAM135AQ9P2D6 1515 aa21.59■■□□□ 1.05
LDLRAD4-205ENST00000585931 ERBINQ96RT1 1412 aa21.58■■□□□ 1.05
LDLRAD4-205ENST00000585931 ZFYVE16Q7Z3T8 1539 aa21.58■■□□□ 1.05
LDLRAD4-205ENST00000585931 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.58■■□□□ 1.04
LDLRAD4-205ENST00000585931 UNC13BO14795 1591 aa21.57■■□□□ 1.04
LDLRAD4-205ENST00000585931 TEX14Q8IWB6 1497 aa21.56■■□□□ 1.04
LDLRAD4-205ENST00000585931 HIRIP3Q9BW71 556 aaPredicted RBP21.55■■□□□ 1.04
LDLRAD4-205ENST00000585931 MIER1Q8N108 512 aa21.53■■□□□ 1.04
LDLRAD4-205ENST00000585931 ATP7AQ04656 1500 aa21.53■■□□□ 1.04
LDLRAD4-205ENST00000585931 INO80Q9ULG1 1556 aaPredicted RBP21.52■■□□□ 1.04
LDLRAD4-205ENST00000585931 MAGI2Q86UL8 1455 aa21.5■■□□□ 1.03
LDLRAD4-205ENST00000585931 MYT1LQ9UL68 1186 aa21.5■■□□□ 1.03
LDLRAD4-205ENST00000585931 IQGAP3Q86VI3 1631 aa21.5■■□□□ 1.03
LDLRAD4-205ENST00000585931 NBPF8Q3BBV2 869 aa21.49■■□□□ 1.03
LDLRAD4-205ENST00000585931 PRKCSHP14314 528 aaPredicted RBP21.49■■□□□ 1.03
LDLRAD4-205ENST00000585931 CFAP74Q9C0B2 1584 aa21.47■■□□□ 1.03
LDLRAD4-205ENST00000585931 ZNF518AQ6AHZ1 1483 aa21.47■■□□□ 1.03
LDLRAD4-205ENST00000585931 KIDINS220Q9ULH0 1771 aa21.45■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms