RNA–Protein interactions for RNA: ENST00000585879.1

RPRD1A-203, Transcript of regulation of nuclear pre-mRNA domain containing 1A, humanhuman

TSL 3

Gene RPRD1A, Length 425 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1A-203ENST00000585879 RIMBP2O15034 1052 aa14.01□□□□□ -0.17
RPRD1A-203ENST00000585879 NLRP6P59044 892 aa14□□□□□ -0.17
RPRD1A-203ENST00000585879 ZSWIM6Q9HCJ5 1215 aa13.99□□□□□ -0.17
RPRD1A-203ENST00000585879 ERBB3P21860 1342 aa13.97□□□□□ -0.17
RPRD1A-203ENST00000585879 STK24Q9Y6E0 443 aa13.97□□□□□ -0.17
RPRD1A-203ENST00000585879 MFRPQ9BY79 579 aa13.96□□□□□ -0.17
RPRD1A-203ENST00000585879 GPR153Q6NV75 609 aa13.95□□□□□ -0.18
RPRD1A-203ENST00000585879 ECM2O94769 699 aaPredicted RBP13.94□□□□□ -0.18
RPRD1A-203ENST00000585879 STK25O00506 426 aa13.92□□□□□ -0.18
RPRD1A-203ENST00000585879 PKD2Q13563 968 aa13.92□□□□□ -0.18
RPRD1A-203ENST00000585879 VARS2Q5ST30 1063 aaKnown RBP13.91□□□□□ -0.18
RPRD1A-203ENST00000585879 RGL2O15211 777 aa13.88□□□□□ -0.19
RPRD1A-203ENST00000585879 KIF3CO14782 793 aa13.85□□□□□ -0.19
RPRD1A-203ENST00000585879 ZNF687Q8N1G0 1237 aa13.84□□□□□ -0.19
RPRD1A-203ENST00000585879 ARSIQ5FYB1 569 aa13.83□□□□□ -0.2
RPRD1A-203ENST00000585879 C2orf72A6NCS6 295 aa13.79□□□□□ -0.2
RPRD1A-203ENST00000585879 KHSRPQ92945 711 aaKnown RBP eCLIP13.77□□□□□ -0.21
RPRD1A-203ENST00000585879 ZNF316A6NFI3 1004 aaPredicted RBP13.74□□□□□ -0.21
RPRD1A-203ENST00000585879 PPP1R37O75864 691 aa13.7□□□□□ -0.22
RPRD1A-203ENST00000585879 SLC34A2O95436 690 aa13.7□□□□□ -0.22
RPRD1A-203ENST00000585879 RNF166Q96A37 237 aaPredicted RBP13.7□□□□□ -0.22
RPRD1A-203ENST00000585879 MYT1LQ9UL68 1186 aa13.67□□□□□ -0.22
RPRD1A-203ENST00000585879 NUDT7P0C024 238 aa13.65□□□□□ -0.22
RPRD1A-203ENST00000585879 TMC2Q8TDI7 906 aa13.65□□□□□ -0.22
RPRD1A-203ENST00000585879 PCDHGA4Q9Y5G9 962 aa13.65□□□□□ -0.22
RPRD1A-203ENST00000585879 PTGER2P43116 358 aa13.62□□□□□ -0.23
RPRD1A-203ENST00000585879 LSM11P83369 360 aaKnown RBP eCLIP13.6□□□□□ -0.23
RPRD1A-203ENST00000585879 HS6ST3Q8IZP7 471 aa13.6□□□□□ -0.23
RPRD1A-203ENST00000585879 LHX6Q9UPM6 363 aa13.6□□□□□ -0.23
RPRD1A-203ENST00000585879 ANKRD13DQ6ZTN6 518 aa13.58□□□□□ -0.24
RPRD1A-203ENST00000585879 PBX2P40425 430 aa13.57□□□□□ -0.24
RPRD1A-203ENST00000585879 POTEEQ6S8J3 1075 aa13.57□□□□□ -0.24
RPRD1A-203ENST00000585879 KDM4FA0A1W2PPD8 638 aa13.54□□□□□ -0.24
RPRD1A-203ENST00000585879 FOXK1P85037 733 aa13.52□□□□□ -0.25
RPRD1A-203ENST00000585879 PTCD2Q8WV60 388 aaKnown RBP13.52□□□□□ -0.25
RPRD1A-203ENST00000585879 GPHNQ9NQX3 736 aaPredicted RBP13.5□□□□□ -0.25
RPRD1A-203ENST00000585879 AXIN2Q9Y2T1 843 aa13.5□□□□□ -0.25
RPRD1A-203ENST00000585879 PLPP6Q8IY26 295 aa13.47□□□□□ -0.25
RPRD1A-203ENST00000585879 DNAJC5Q9H3Z4 198 aa13.47□□□□□ -0.25
RPRD1A-203ENST00000585879 PSDA5PKW4 1024 aaPredicted RBP13.45□□□□□ -0.26
RPRD1A-203ENST00000585879 CHGAP10645 457 aaKnown RBP13.45□□□□□ -0.26
RPRD1A-203ENST00000585879 DSG2Q14126 1118 aa13.44□□□□□ -0.26
RPRD1A-203ENST00000585879 NKX1-1Q15270 411 aaPredicted RBP13.44□□□□□ -0.26
RPRD1A-203ENST00000585879 ARHGAP33O14559 1287 aa13.41□□□□□ -0.26
RPRD1A-203ENST00000585879 ADGRD1Q6QNK2 874 aa13.38□□□□□ -0.27
RPRD1A-203ENST00000585879 TBC1D12O60347 775 aa13.34□□□□□ -0.27
RPRD1A-203ENST00000585879 TK2O00142 265 aa13.33□□□□□ -0.28
RPRD1A-203ENST00000585879 CRISPLD2Q9H0B8 497 aa13.33□□□□□ -0.28
RPRD1A-203ENST00000585879 RYDENQ9NUL5 291 aaKnown RBP13.33□□□□□ -0.28
RPRD1A-203ENST00000585879 PSEN2P49810 448 aa13.32□□□□□ -0.28
RPRD1A-203ENST00000585879 PPP4R3BQ5MIZ7 849 aa13.32□□□□□ -0.28
RPRD1A-203ENST00000585879 DMRTA1Q5VZB9 504 aa13.32□□□□□ -0.28
RPRD1A-203ENST00000585879 OXER1Q8TDS5 423 aa13.32□□□□□ -0.28
RPRD1A-203ENST00000585879 HRO43593 1189 aa13.3□□□□□ -0.28
RPRD1A-203ENST00000585879 HCSTQ9UBK5 93 aa13.26□□□□□ -0.29
RPRD1A-203ENST00000585879 PPP1R15BQ5SWA1 713 aa13.25□□□□□ -0.29
RPRD1A-203ENST00000585879 NCKAP5LQ9HCH0 1330 aa13.24□□□□□ -0.29
RPRD1A-203ENST00000585879 UPF1Q92900 1129 aaKnown RBP eCLIP13.24□□□□□ -0.29
RPRD1A-203ENST00000585879 GTPBP6O43824 516 aaPredicted RBP13.21□□□□□ -0.29
RPRD1A-203ENST00000585879 KCNK17Q96T54 332 aa13.2□□□□□ -0.3
RPRD1A-203ENST00000585879 PDE4AP27815 886 aa13.19□□□□□ -0.3
RPRD1A-203ENST00000585879 PLA2G2EQ9NZK7 142 aa13.18□□□□□ -0.3
RPRD1A-203ENST00000585879 ZNF454Q8N9F8 522 aa13.17□□□□□ -0.3
RPRD1A-203ENST00000585879 BCL2L12Q9HB09 334 aa13.17□□□□□ -0.3
RPRD1A-203ENST00000585879 FOSBP53539 338 aa13.16□□□□□ -0.3
RPRD1A-203ENST00000585879 KCNH8Q96L42 1107 aa13.16□□□□□ -0.3
RPRD1A-203ENST00000585879 ANO8Q9HCE9 1232 aaPredicted RBP13.16□□□□□ -0.3
RPRD1A-203ENST00000585879 VPS9D1Q9Y2B5 631 aa13.15□□□□□ -0.3
RPRD1A-203ENST00000585879 SLC4A5Q9BY07 1137 aa13.13□□□□□ -0.31
RPRD1A-203ENST00000585879 KCTD12Q96CX2 325 aaKnown RBP13.12□□□□□ -0.31
RPRD1A-203ENST00000585879 MFSD10Q14728 455 aa13.11□□□□□ -0.31
RPRD1A-203ENST00000585879 DDX27Q96GQ7 796 aaKnown RBP13.1□□□□□ -0.31
RPRD1A-203ENST00000585879 LARP6Q9BRS8 491 aaKnown RBP13.1□□□□□ -0.31
RPRD1A-203ENST00000585879 EVI5O60447 810 aa13.09□□□□□ -0.31
RPRD1A-203ENST00000585879 JPH4Q96JJ6 628 aa13.09□□□□□ -0.31
RPRD1A-203ENST00000585879 STAC3Q96MF2 364 aa13.09□□□□□ -0.31
RPRD1A-203ENST00000585879 BHMG1C9JSJ3 638 aaPredicted RBP13.07□□□□□ -0.32
RPRD1A-203ENST00000585879 PTPREP23469 700 aa13.07□□□□□ -0.32
RPRD1A-203ENST00000585879 ZBED2Q9BTP6 218 aa13.06□□□□□ -0.32
RPRD1A-203ENST00000585879 ZDHHC16Q969W1 377 aa13.04□□□□□ -0.32
RPRD1A-203ENST00000585879 ADAM33Q9BZ11 813 aa13.04□□□□□ -0.32
RPRD1A-203ENST00000585879 EMILIN3Q9NT22 766 aa13.04□□□□□ -0.32
RPRD1A-203ENST00000585879 MAP3K9P80192 1104 aa13.01□□□□□ -0.33
RPRD1A-203ENST00000585879 CADPS2Q86UW7 1296 aa12.99□□□□□ -0.33
RPRD1A-203ENST00000585879 PTPN5P54829 565 aa12.97□□□□□ -0.33
RPRD1A-203ENST00000585879 THSD4Q6ZMP0 1018 aa12.97□□□□□ -0.33
RPRD1A-203ENST00000585879 DCAF8L2P0C7V8 631 aa12.96□□□□□ -0.33
RPRD1A-203ENST00000585879 PCDHGA10Q9Y5H3 936 aa12.96□□□□□ -0.33
RPRD1A-203ENST00000585879 MRPL50Q8N5N7 158 aaKnown RBP12.94□□□□□ -0.34
RPRD1A-203ENST00000585879 PPP1R3GB7ZBB8 358 aa12.91□□□□□ -0.34
RPRD1A-203ENST00000585879 IFFO2Q5TF58 517 aa12.91□□□□□ -0.34
RPRD1A-203ENST00000585879 WNT2BQ93097 391 aa12.91□□□□□ -0.34
RPRD1A-203ENST00000585879 NBPF3Q9H094 633 aa12.91□□□□□ -0.34
RPRD1A-203ENST00000585879 GOLGA8CPA6NN73 597 aa12.9□□□□□ -0.34
RPRD1A-203ENST00000585879 CAMK2BQ13554 666 aa12.9□□□□□ -0.34
RPRD1A-203ENST00000585879 PHF14O94880 888 aa12.89□□□□□ -0.35
RPRD1A-203ENST00000585879 COL9A1P20849 921 aa12.87□□□□□ -0.35
RPRD1A-203ENST00000585879 TYW1BQ6NUM6 668 aa12.87□□□□□ -0.35
RPRD1A-203ENST00000585879 FBXW7Q969H0 707 aa12.87□□□□□ -0.35
RPRD1A-203ENST00000585879 RABGEF1Q9UJ41 708 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms