RNA–Protein interactions for RNA: ENST00000583775.1

PRKCA-205, Transcript of protein kinase C alpha, humanhuman

TSL 3

Gene PRKCA, Length 321 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCA-205ENST00000583775 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.95□□□□□ -0.5
PRKCA-205ENST00000583775 ZFP91Q96JP5 570 aaPredicted RBP11.95□□□□□ -0.5
PRKCA-205ENST00000583775 RTN4Q9NQC3 1192 aaKnown RBP11.94□□□□□ -0.5
PRKCA-205ENST00000583775 PHF8Q9UPP1 1060 aa11.94□□□□□ -0.5
PRKCA-205ENST00000583775 RNF166Q96A37 237 aaPredicted RBP11.93□□□□□ -0.5
PRKCA-205ENST00000583775 VGFO15240 615 aaPredicted RBP11.91□□□□□ -0.5
PRKCA-205ENST00000583775 FBXO22Q8NEZ5 403 aa11.89□□□□□ -0.51
PRKCA-205ENST00000583775 MYT1LQ9UL68 1186 aa11.88□□□□□ -0.51
PRKCA-205ENST00000583775 ARSIQ5FYB1 569 aa11.86□□□□□ -0.51
PRKCA-205ENST00000583775 KIF3CO14782 793 aa11.82□□□□□ -0.52
PRKCA-205ENST00000583775 ZNF316A6NFI3 1004 aaPredicted RBP11.81□□□□□ -0.52
PRKCA-205ENST00000583775 PTGER2P43116 358 aa11.81□□□□□ -0.52
PRKCA-205ENST00000583775 NLRP6P59044 892 aa11.81□□□□□ -0.52
PRKCA-205ENST00000583775 AMER1Q5JTC6 1135 aaPredicted RBP11.81□□□□□ -0.52
PRKCA-205ENST00000583775 KHSRPQ92945 711 aaKnown RBP eCLIP11.81□□□□□ -0.52
PRKCA-205ENST00000583775 MFRPQ9BY79 579 aa11.78□□□□□ -0.52
PRKCA-205ENST00000583775 BCL11BQ9C0K0 894 aaPredicted RBP11.76□□□□□ -0.53
PRKCA-205ENST00000583775 LSM11P83369 360 aaKnown RBP eCLIP11.74□□□□□ -0.53
PRKCA-205ENST00000583775 POTEEQ6S8J3 1075 aa11.73□□□□□ -0.53
PRKCA-205ENST00000583775 CCDC180Q9P1Z9 1646 aa11.73□□□□□ -0.53
PRKCA-205ENST00000583775 C2orf72A6NCS6 295 aa11.72□□□□□ -0.53
PRKCA-205ENST00000583775 ANKRD13DQ6ZTN6 518 aa11.72□□□□□ -0.53
PRKCA-205ENST00000583775 SLC34A2O95436 690 aa11.71□□□□□ -0.53
PRKCA-205ENST00000583775 STK24Q9Y6E0 443 aa11.68□□□□□ -0.54
PRKCA-205ENST00000583775 TAOK2Q9UL54 1235 aa11.67□□□□□ -0.54
PRKCA-205ENST00000583775 NUDT7P0C024 238 aa11.66□□□□□ -0.54
PRKCA-205ENST00000583775 PBX2P40425 430 aa11.66□□□□□ -0.54
PRKCA-205ENST00000583775 LHX6Q9UPM6 363 aa11.64□□□□□ -0.55
PRKCA-205ENST00000583775 PCDHGA4Q9Y5G9 962 aa11.64□□□□□ -0.55
PRKCA-205ENST00000583775 KDM4FA0A1W2PPD8 638 aa11.63□□□□□ -0.55
PRKCA-205ENST00000583775 STK25O00506 426 aa11.61□□□□□ -0.55
PRKCA-205ENST00000583775 AXIN2Q9Y2T1 843 aa11.6□□□□□ -0.55
PRKCA-205ENST00000583775 PKD2Q13563 968 aa11.56□□□□□ -0.56
PRKCA-205ENST00000583775 PPP1R37O75864 691 aa11.55□□□□□ -0.56
PRKCA-205ENST00000583775 ARHGAP33O14559 1287 aa11.52□□□□□ -0.57
PRKCA-205ENST00000583775 RGL2O15211 777 aa11.52□□□□□ -0.57
PRKCA-205ENST00000583775 TMC2Q8TDI7 906 aa11.52□□□□□ -0.57
PRKCA-205ENST00000583775 ECM2O94769 699 aaPredicted RBP11.51□□□□□ -0.57
PRKCA-205ENST00000583775 DCAF8L2P0C7V8 631 aa11.51□□□□□ -0.57
PRKCA-205ENST00000583775 ADGRD1Q6QNK2 874 aa11.51□□□□□ -0.57
PRKCA-205ENST00000583775 PTCD2Q8WV60 388 aaKnown RBP11.51□□□□□ -0.57
PRKCA-205ENST00000583775 HCSTQ9UBK5 93 aa11.5□□□□□ -0.57
PRKCA-205ENST00000583775 HRO43593 1189 aa11.49□□□□□ -0.57
PRKCA-205ENST00000583775 PSDA5PKW4 1024 aaPredicted RBP11.48□□□□□ -0.57
PRKCA-205ENST00000583775 PLA2G2EQ9NZK7 142 aa11.48□□□□□ -0.57
PRKCA-205ENST00000583775 TK2O00142 265 aa11.47□□□□□ -0.57
PRKCA-205ENST00000583775 FOXK1P85037 733 aa11.44□□□□□ -0.58
PRKCA-205ENST00000583775 DMRTA1Q5VZB9 504 aa11.44□□□□□ -0.58
PRKCA-205ENST00000583775 PSEN2P49810 448 aa11.41□□□□□ -0.58
PRKCA-205ENST00000583775 GPHNQ9NQX3 736 aaPredicted RBP11.4□□□□□ -0.58
PRKCA-205ENST00000583775 PLPP6Q8IY26 295 aa11.39□□□□□ -0.59
PRKCA-205ENST00000583775 DSG2Q14126 1118 aa11.36□□□□□ -0.59
PRKCA-205ENST00000583775 ZCCHC6Q5VYS8 1495 aaKnown RBP11.34□□□□□ -0.59
PRKCA-205ENST00000583775 PPP4R3BQ5MIZ7 849 aa11.33□□□□□ -0.6
PRKCA-205ENST00000583775 HS6ST3Q8IZP7 471 aa11.3□□□□□ -0.6
PRKCA-205ENST00000583775 OXER1Q8TDS5 423 aa11.29□□□□□ -0.6
PRKCA-205ENST00000583775 TBC1D12O60347 775 aa11.28□□□□□ -0.6
PRKCA-205ENST00000583775 KCTD12Q96CX2 325 aaKnown RBP11.28□□□□□ -0.6
PRKCA-205ENST00000583775 VPS9D1Q9Y2B5 631 aa11.28□□□□□ -0.6
PRKCA-205ENST00000583775 SLC4A5Q9BY07 1137 aa11.27□□□□□ -0.61
PRKCA-205ENST00000583775 KCNK17Q96T54 332 aa11.25□□□□□ -0.61
PRKCA-205ENST00000583775 DNAJC5Q9H3Z4 198 aa11.25□□□□□ -0.61
PRKCA-205ENST00000583775 BHMG1C9JSJ3 638 aaPredicted RBP11.24□□□□□ -0.61
PRKCA-205ENST00000583775 IFFO2Q5TF58 517 aa11.24□□□□□ -0.61
PRKCA-205ENST00000583775 DCAF1Q9Y4B6 1507 aa11.23□□□□□ -0.61
PRKCA-205ENST00000583775 CRISPLD2Q9H0B8 497 aa11.22□□□□□ -0.61
PRKCA-205ENST00000583775 BCL2L12Q9HB09 334 aa11.22□□□□□ -0.61
PRKCA-205ENST00000583775 NKX1-1Q15270 411 aaPredicted RBP11.2□□□□□ -0.62
PRKCA-205ENST00000583775 ANO8Q9HCE9 1232 aaPredicted RBP11.2□□□□□ -0.62
PRKCA-205ENST00000583775 CHGAP10645 457 aaKnown RBP11.19□□□□□ -0.62
PRKCA-205ENST00000583775 FOSBP53539 338 aa11.19□□□□□ -0.62
PRKCA-205ENST00000583775 RGS20O76081 388 aa11.16□□□□□ -0.62
PRKCA-205ENST00000583775 ZNF454Q8N9F8 522 aa11.16□□□□□ -0.62
PRKCA-205ENST00000583775 STAC3Q96MF2 364 aa11.16□□□□□ -0.62
PRKCA-205ENST00000583775 ZBED2Q9BTP6 218 aa11.16□□□□□ -0.62
PRKCA-205ENST00000583775 THSD4Q6ZMP0 1018 aa11.15□□□□□ -0.62
PRKCA-205ENST00000583775 KCNH8Q96L42 1107 aa11.15□□□□□ -0.62
PRKCA-205ENST00000583775 PTPN5P54829 565 aa11.14□□□□□ -0.63
PRKCA-205ENST00000583775 UPF1Q92900 1129 aaKnown RBP eCLIP11.14□□□□□ -0.63
PRKCA-205ENST00000583775 NCKAP5LQ9HCH0 1330 aa11.12□□□□□ -0.63
PRKCA-205ENST00000583775 PPP1R15BQ5SWA1 713 aa11.12□□□□□ -0.63
PRKCA-205ENST00000583775 PTPREP23469 700 aa11.1□□□□□ -0.63
PRKCA-205ENST00000583775 JPH4Q96JJ6 628 aa11.1□□□□□ -0.63
PRKCA-205ENST00000583775 A0A0G2JS52 829 aa11.08□□□□□ -0.64
PRKCA-205ENST00000583775 ADAM33Q9BZ11 813 aa11.08□□□□□ -0.64
PRKCA-205ENST00000583775 CFAP44Q96MT7 982 aa11.06□□□□□ -0.64
PRKCA-205ENST00000583775 WNT2BQ93097 391 aa11.05□□□□□ -0.64
PRKCA-205ENST00000583775 ZDHHC16Q969W1 377 aa11.05□□□□□ -0.64
PRKCA-205ENST00000583775 MYO15BQ96JP2 1530 aa11.04□□□□□ -0.64
PRKCA-205ENST00000583775 EVI5O60447 810 aa11.04□□□□□ -0.64
PRKCA-205ENST00000583775 PAXIP1Q6ZW49 1069 aaPredicted RBP11.04□□□□□ -0.64
PRKCA-205ENST00000583775 BBXQ8WY36 941 aaPredicted RBP11.04□□□□□ -0.64
PRKCA-205ENST00000583775 RYDENQ9NUL5 291 aaKnown RBP11.04□□□□□ -0.64
PRKCA-205ENST00000583775 PDE4AP27815 886 aa11.03□□□□□ -0.64
PRKCA-205ENST00000583775 MRPL50Q8N5N7 158 aaKnown RBP11.03□□□□□ -0.64
PRKCA-205ENST00000583775 SLC24A1O60721 1099 aa11□□□□□ -0.65
PRKCA-205ENST00000583775 PLCB2Q00722 1185 aa11□□□□□ -0.65
PRKCA-205ENST00000583775 MFSD10Q14728 455 aa11□□□□□ -0.65
PRKCA-205ENST00000583775 ZBTB4Q9P1Z0 1013 aaPredicted RBP11□□□□□ -0.65
PRKCA-205ENST00000583775 IRX2Q9BZI1 471 aaPredicted RBP10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 8.9 ms