RNA–Protein interactions for RNA: ENST00000583741.1

SRSF1-206, Transcript of serine and arginine rich splicing factor 1, humanhuman

TSL 5

Gene SRSF1, Length 1,465 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-206ENST00000583741 FMN1Q68DA7 1419 aa33.95■■■■□ 3.03
SRSF1-206ENST00000583741 MYO5CQ9NQX4 1742 aa33.95■■■■□ 3.03
SRSF1-206ENST00000583741 UBTFP17480 764 aaKnown RBP33.94■■■■□ 3.02
SRSF1-206ENST00000583741 KIF14Q15058 1648 aa33.92■■■■□ 3.02
SRSF1-206ENST00000583741 FER1L4A9Z1Z3 1794 aa33.91■■■■□ 3.02
SRSF1-206ENST00000583741 ATP1B4Q9UN42 357 aaPredicted RBP33.9■■■■□ 3.02
SRSF1-206ENST00000583741 PLPPR3Q6T4P5 718 aa33.88■■■■□ 3.01
SRSF1-206ENST00000583741 LRRIQ1Q96JM4 1722 aa33.86■■■■□ 3.01
SRSF1-206ENST00000583741 HSPA2P54652 639 aa33.85■■■■□ 3.01
SRSF1-206ENST00000583741 MLECQ14165 292 aa33.85■■■■□ 3.01
SRSF1-206ENST00000583741 EFCAB2Q5VUJ9 269 aa33.82■■■■□ 3
SRSF1-206ENST00000583741 ATP10AO60312 1499 aa33.81■■■■□ 3
SRSF1-206ENST00000583741 TROQ12816 1431 aaPredicted RBP33.8■■■■□ 3
SRSF1-206ENST00000583741 C9orf84Q5VXU9 1444 aa33.8■■■■□ 3
SRSF1-206ENST00000583741 ARHGEF12Q9NZN5 1544 aa33.79■■■■□ 3
SRSF1-206ENST00000583741 CDK11AQ9UQ88 783 aaPredicted RBP33.79■■■■□ 3
SRSF1-206ENST00000583741 ARHGAP5Q13017 1502 aa33.76■■■■□ 3
SRSF1-206ENST00000583741 CHIC1Q5VXU3 224 aa33.76■■■□□ 2.99
SRSF1-206ENST00000583741 ZNF518AQ6AHZ1 1483 aa33.74■■■□□ 2.99
SRSF1-206ENST00000583741 KDM5CP41229 1560 aa33.74■■■□□ 2.99
SRSF1-206ENST00000583741 CDC42BPBQ9Y5S2 1711 aa33.71■■■□□ 2.99
SRSF1-206ENST00000583741 CLIP1P30622 1438 aa33.71■■■□□ 2.99
SRSF1-206ENST00000583741 AFAP1Q8N556 730 aa33.68■■■□□ 2.98
SRSF1-206ENST00000583741 PREX1Q8TCU6 1659 aa33.67■■■□□ 2.98
SRSF1-206ENST00000583741 DIP2CQ9Y2E4 1556 aa33.67■■■□□ 2.98
SRSF1-206ENST00000583741 PREX2Q70Z35 1606 aa33.63■■■□□ 2.97
SRSF1-206ENST00000583741 ABCA6Q8N139 1617 aa33.62■■■□□ 2.97
SRSF1-206ENST00000583741 CEBPAP49715 358 aaPredicted RBP33.62■■■□□ 2.97
SRSF1-206ENST00000583741 REREQ9P2R6 1566 aa33.6■■■□□ 2.97
SRSF1-206ENST00000583741 ABCC1P33527 1531 aa33.58■■■□□ 2.97
SRSF1-206ENST00000583741 CASKIN1Q8WXD9 1431 aa33.58■■■□□ 2.97
SRSF1-206ENST00000583741 CCDC18Q5T9S5 1454 aa33.57■■■□□ 2.96
SRSF1-206ENST00000583741 ITSN2Q9NZM3 1697 aa33.56■■■□□ 2.96
SRSF1-206ENST00000583741 MLH3Q9UHC1 1453 aa33.56■■■□□ 2.96
SRSF1-206ENST00000583741 TRAPPC8Q9Y2L5 1435 aa33.54■■■□□ 2.96
SRSF1-206ENST00000583741 MYT1LQ9UL68 1186 aa33.54■■■□□ 2.96
SRSF1-206ENST00000583741 CDC42BPAQ5VT25 1732 aa33.53■■■□□ 2.96
SRSF1-206ENST00000583741 STRCQ7RTU9 1775 aa33.5■■■□□ 2.95
SRSF1-206ENST00000583741 CERKQ8TCT0 537 aa33.5■■■□□ 2.95
SRSF1-206ENST00000583741 C3P01024 1663 aa33.48■■■□□ 2.95
SRSF1-206ENST00000583741 KIDINS220Q9ULH0 1771 aa33.47■■■□□ 2.95
SRSF1-206ENST00000583741 SETD1BQ9UPS6 1966 aaKnown RBP33.47■■■□□ 2.95
SRSF1-206ENST00000583741 AGLP35573 1532 aa33.47■■■□□ 2.95
SRSF1-206ENST00000583741 UHRF1BP1Q6BDS2 1440 aa33.46■■■□□ 2.95
SRSF1-206ENST00000583741 FYCO1Q9BQS8 1478 aa33.44■■■□□ 2.94
SRSF1-206ENST00000583741 SAMD9LQ8IVG5 1584 aa33.39■■■□□ 2.93
SRSF1-206ENST00000583741 SYCP2Q9BX26 1530 aa33.34■■■□□ 2.93
SRSF1-206ENST00000583741 GPATCH8Q9UKJ3 1502 aaKnown RBP33.32■■■□□ 2.92
SRSF1-206ENST00000583741 DMRT2Q9Y5R5 561 aa33.31■■■□□ 2.92
SRSF1-206ENST00000583741 ESF1Q9H501 851 aaKnown RBP33.3■■■□□ 2.92
SRSF1-206ENST00000583741 ZNF777Q9ULD5 760 aaPredicted RBP33.3■■■□□ 2.92
SRSF1-206ENST00000583741 CNTLNQ9NXG0 1405 aa33.26■■■□□ 2.92
SRSF1-206ENST00000583741 SUPT6HQ7KZ85 1726 aaKnown RBP33.24■■■□□ 2.91
SRSF1-206ENST00000583741 MROH2AA6NES4 1674 aa33.24■■■□□ 2.91
SRSF1-206ENST00000583741 PTPRTO14522 1441 aa33.23■■■□□ 2.91
SRSF1-206ENST00000583741 HNRNPMP52272 730 aaKnown RBP eCLIP33.22■■■□□ 2.91
SRSF1-206ENST00000583741 INO80Q9ULG1 1556 aaPredicted RBP33.22■■■□□ 2.91
SRSF1-206ENST00000583741 ATP7AQ04656 1500 aa33.22■■■□□ 2.91
SRSF1-206ENST00000583741 SPAG9O60271 1321 aaKnown RBP33.21■■■□□ 2.91
SRSF1-206ENST00000583741 PLXNC1O60486 1568 aa33.18■■■□□ 2.9
SRSF1-206ENST00000583741 NCOA1Q15788 1441 aa33.17■■■□□ 2.9
SRSF1-206ENST00000583741 KIAA1107Q9UPP5 1409 aa33.17■■■□□ 2.9
SRSF1-206ENST00000583741 NPATQ14207 1427 aa33.15■■■□□ 2.9
SRSF1-206ENST00000583741 PLEKHH2Q8IVE3 1493 aa33.15■■■□□ 2.9
SRSF1-206ENST00000583741 CLTCQ00610 1675 aaKnown RBP33.14■■■□□ 2.9
SRSF1-206ENST00000583741 CFDP1Q9UEE9 299 aaPredicted RBP33.14■■■□□ 2.9
SRSF1-206ENST00000583741 CCNB3Q8WWL7 1395 aa33.14■■■□□ 2.9
SRSF1-206ENST00000583741 LTBP4Q8N2S1 1624 aa33.13■■■□□ 2.89
SRSF1-206ENST00000583741 ZMYM3Q14202 1370 aa33.13■■■□□ 2.89
SRSF1-206ENST00000583741 CAMSAP1Q5T5Y3 1602 aa33.11■■■□□ 2.89
SRSF1-206ENST00000583741 A2MP01023 1474 aa33.11■■■□□ 2.89
SRSF1-206ENST00000583741 MTUS2Q5JR59 1369 aa33.1■■■□□ 2.89
SRSF1-206ENST00000583741 TIAM1Q13009 1591 aa33.08■■■□□ 2.89
SRSF1-206ENST00000583741 MYO3AQ8NEV4 1616 aa33.06■■■□□ 2.88
SRSF1-206ENST00000583741 ADGBQ8N7X0 1667 aa33.05■■■□□ 2.88
SRSF1-206ENST00000583741 ZNF142P52746 1687 aaPredicted RBP33.04■■■□□ 2.88
SRSF1-206ENST00000583741 ZNF644Q9H582 1327 aaPredicted RBP33.01■■■□□ 2.88
SRSF1-206ENST00000583741 EHBP1L1Q8N3D4 1523 aa33.01■■■□□ 2.88
SRSF1-206ENST00000583741 PTPRKQ15262 1439 aa32.99■■■□□ 2.87
SRSF1-206ENST00000583741 MBD5Q9P267 1494 aa32.99■■■□□ 2.87
SRSF1-206ENST00000583741 GGT6Q6P531 493 aa32.98■■■□□ 2.87
SRSF1-206ENST00000583741 CEP170BQ9Y4F5 1589 aaPredicted RBP32.97■■■□□ 2.87
SRSF1-206ENST00000583741 IQSEC2Q5JU85 1478 aa32.97■■■□□ 2.87
SRSF1-206ENST00000583741 NCKAP5LQ9HCH0 1330 aa32.95■■■□□ 2.86
SRSF1-206ENST00000583741 DISP3Q9P2K9 1392 aa32.94■■■□□ 2.86
SRSF1-206ENST00000583741 CEP162Q5TB80 1403 aa32.92■■■□□ 2.86
SRSF1-206ENST00000583741 PLA2R1Q13018 1463 aa32.92■■■□□ 2.86
SRSF1-206ENST00000583741 TCOF1Q13428 1488 aaKnown RBP32.9■■■□□ 2.86
SRSF1-206ENST00000583741 RTEL1-TNFRSF6BF6WH68 1400 aa32.89■■■□□ 2.86
SRSF1-206ENST00000583741 ZNF335Q9H4Z2 1342 aaPredicted RBP32.87■■■□□ 2.85
SRSF1-206ENST00000583741 PPP6R1Q9UPN7 881 aa32.86■■■□□ 2.85
SRSF1-206ENST00000583741 ILDR2Q71H61 639 aa32.86■■■□□ 2.85
SRSF1-206ENST00000583741 SPATA31D1Q6ZQQ2 1576 aa32.84■■■□□ 2.85
SRSF1-206ENST00000583741 DHX29Q7Z478 1369 aaKnown RBP32.84■■■□□ 2.85
SRSF1-206ENST00000583741 PKD2Q13563 968 aa32.84■■■□□ 2.85
SRSF1-206ENST00000583741 DNMT1P26358 1616 aaKnown RBP32.81■■■□□ 2.84
SRSF1-206ENST00000583741 CAMSAP2Q08AD1 1489 aa32.81■■■□□ 2.84
SRSF1-206ENST00000583741 NCOA2Q15596 1464 aa32.81■■■□□ 2.84
SRSF1-206ENST00000583741 CCDC141Q6ZP82 1450 aa32.81■■■□□ 2.84
SRSF1-206ENST00000583741 A2ML1A8K2U0 1454 aa32.8■■■□□ 2.84
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms