RNA–Protein interactions for RNA: ENST00000582486.5

GGA3-213, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 5 BASIC

Gene GGA3, Length 2,319 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-213ENST00000582486 DNMT1P26358 1616 aaKnown RBP16.45■□□□□ 0.22
GGA3-213ENST00000582486 MAPKBP1O60336 1514 aa16.45■□□□□ 0.22
GGA3-213ENST00000582486 KDM5BQ9UGL1 1544 aa16.45■□□□□ 0.22
GGA3-213ENST00000582486 ZCCHC11Q5TAX3 1644 aaKnown RBP16.44■□□□□ 0.22
GGA3-213ENST00000582486 AKNAQ7Z591 1439 aa16.43■□□□□ 0.22
GGA3-213ENST00000582486 KCNH8Q96L42 1107 aa16.42■□□□□ 0.22
GGA3-213ENST00000582486 ROCK1Q13464 1354 aa16.41■□□□□ 0.22
GGA3-213ENST00000582486 GCC2Q8IWJ2 1684 aa16.4■□□□□ 0.22
GGA3-213ENST00000582486 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.4■□□□□ 0.22
GGA3-213ENST00000582486 TTC37Q6PGP7 1564 aa16.38■□□□□ 0.21
GGA3-213ENST00000582486 KDM6BO15054 1643 aa16.37■□□□□ 0.21
GGA3-213ENST00000582486 CDC42BPBQ9Y5S2 1711 aa16.37■□□□□ 0.21
GGA3-213ENST00000582486 PREX2Q70Z35 1606 aa16.36■□□□□ 0.21
GGA3-213ENST00000582486 HNRNPMP52272 730 aaKnown RBP eCLIP16.35■□□□□ 0.21
GGA3-213ENST00000582486 SIN3AQ96ST3 1273 aa16.35■□□□□ 0.21
GGA3-213ENST00000582486 NCOA1Q15788 1441 aa16.34■□□□□ 0.21
GGA3-213ENST00000582486 TRIM52Q96A61 297 aa16.34■□□□□ 0.21
GGA3-213ENST00000582486 CROCC2H7BZ55 1655 aa16.33■□□□□ 0.2
GGA3-213ENST00000582486 SAMD9LQ8IVG5 1584 aa16.33■□□□□ 0.2
GGA3-213ENST00000582486 ARHGAP5Q13017 1502 aa16.33■□□□□ 0.2
GGA3-213ENST00000582486 NEUROD1Q13562 356 aa16.33■□□□□ 0.2
GGA3-213ENST00000582486 MBD5Q9P267 1494 aa16.32■□□□□ 0.2
GGA3-213ENST00000582486 ADGRL2O95490 1459 aa16.32■□□□□ 0.2
GGA3-213ENST00000582486 TSPY4P0CV99 314 aa16.31■□□□□ 0.2
GGA3-213ENST00000582486 TSPY10P0CW01 314 aa16.31■□□□□ 0.2
GGA3-213ENST00000582486 MYO5CQ9NQX4 1742 aa16.31■□□□□ 0.2
GGA3-213ENST00000582486 ADGBQ8N7X0 1667 aa16.3■□□□□ 0.2
GGA3-213ENST00000582486 ANKRD30AQ9BXX3 1397 aa16.3■□□□□ 0.2
GGA3-213ENST00000582486 WDR7Q9Y4E6 1490 aa16.3■□□□□ 0.2
GGA3-213ENST00000582486 PLCH2O75038 1416 aa16.29■□□□□ 0.2
GGA3-213ENST00000582486 C9orf84Q5VXU9 1444 aa16.29■□□□□ 0.2
GGA3-213ENST00000582486 SHANK2Q9UPX8 1470 aa16.29■□□□□ 0.2
GGA3-213ENST00000582486 ARHGEF5Q12774 1597 aa16.29■□□□□ 0.2
GGA3-213ENST00000582486 ZNF316A6NFI3 1004 aaPredicted RBP16.28■□□□□ 0.2
GGA3-213ENST00000582486 RSPH4AQ5TD94 716 aa16.28■□□□□ 0.2
GGA3-213ENST00000582486 MPHOSPH9Q99550 1183 aa16.27■□□□□ 0.2
GGA3-213ENST00000582486 CCDC141Q6ZP82 1450 aa16.27■□□□□ 0.19
GGA3-213ENST00000582486 NPM1P06748 294 aaKnown RBP eCLIP16.27■□□□□ 0.19
GGA3-213ENST00000582486 SYCP2Q9BX26 1530 aa16.26■□□□□ 0.19
GGA3-213ENST00000582486 ASXL2Q76L83 1435 aa16.26■□□□□ 0.19
GGA3-213ENST00000582486 EFCAB2Q5VUJ9 269 aa16.26■□□□□ 0.19
GGA3-213ENST00000582486 DENND4BO75064 1496 aaPredicted RBP16.26■□□□□ 0.19
GGA3-213ENST00000582486 ACIN1Q9UKV3 1341 aaKnown RBP16.26■□□□□ 0.19
GGA3-213ENST00000582486 KIAA1107Q9UPP5 1409 aa16.24■□□□□ 0.19
GGA3-213ENST00000582486 ANKRD50Q9ULJ7 1429 aa16.24■□□□□ 0.19
GGA3-213ENST00000582486 PLEKHH2Q8IVE3 1493 aa16.23■□□□□ 0.19
GGA3-213ENST00000582486 TIMELESSQ9UNS1 1208 aa16.23■□□□□ 0.19
GGA3-213ENST00000582486 ARHGEF12Q9NZN5 1544 aa16.22■□□□□ 0.19
GGA3-213ENST00000582486 KIF15Q9NS87 1388 aa16.21■□□□□ 0.19
GGA3-213ENST00000582486 FOXD1Q16676 465 aa16.2■□□□□ 0.18
GGA3-213ENST00000582486 SLC4A1APQ9BWU0 796 aaKnown RBP16.2■□□□□ 0.18
GGA3-213ENST00000582486 ABCA9Q8IUA7 1624 aa16.19■□□□□ 0.18
GGA3-213ENST00000582486 ARAP3Q8WWN8 1544 aa16.19■□□□□ 0.18
GGA3-213ENST00000582486 CYB5RLQ6IPT4 315 aa16.18■□□□□ 0.18
GGA3-213ENST00000582486 ABCC1P33527 1531 aa16.17■□□□□ 0.18
GGA3-213ENST00000582486 TONSLQ96HA7 1378 aa16.17■□□□□ 0.18
GGA3-213ENST00000582486 DIEXFQ68CQ4 756 aaKnown RBP16.17■□□□□ 0.18
GGA3-213ENST00000582486 PZPP20742 1482 aa16.16■□□□□ 0.18
GGA3-213ENST00000582486 MAST1Q9Y2H9 1570 aa16.16■□□□□ 0.18
GGA3-213ENST00000582486 TRAPPC8Q9Y2L5 1435 aa16.16■□□□□ 0.18
GGA3-213ENST00000582486 PPP1R15AO75807 674 aaPredicted RBP16.16■□□□□ 0.18
GGA3-213ENST00000582486 FANCAO15360 1455 aa16.15■□□□□ 0.18
GGA3-213ENST00000582486 ANKRD30BQ9BXX2 1392 aa16.13■□□□□ 0.17
GGA3-213ENST00000582486 RIMBP3CA6NJZ7 1639 aa16.13■□□□□ 0.17
GGA3-213ENST00000582486 RIMBP3BA6NNM3 1639 aa16.13■□□□□ 0.17
GGA3-213ENST00000582486 RIMBP3Q9UFD9 1639 aa16.13■□□□□ 0.17
GGA3-213ENST00000582486 NUP155O75694 1391 aa16.13■□□□□ 0.17
GGA3-213ENST00000582486 AFAP1Q8N556 730 aa16.13■□□□□ 0.17
GGA3-213ENST00000582486 PKD2Q13563 968 aa16.11■□□□□ 0.17
GGA3-213ENST00000582486 PLXNC1O60486 1568 aa16.1■□□□□ 0.17
GGA3-213ENST00000582486 SPAG9O60271 1321 aaKnown RBP16.09■□□□□ 0.17
GGA3-213ENST00000582486 CD109Q6YHK3 1445 aa16.09■□□□□ 0.17
GGA3-213ENST00000582486 ADGRL1O94910 1474 aa16.08■□□□□ 0.17
GGA3-213ENST00000582486 SCAPERQ9BY12 1400 aa16.08■□□□□ 0.16
GGA3-213ENST00000582486 KDM5DQ9BY66 1539 aa16.07■□□□□ 0.16
GGA3-213ENST00000582486 DUOX2Q9NRD8 1548 aa16.07■□□□□ 0.16
GGA3-213ENST00000582486 RPRD2Q5VT52 1461 aaKnown RBP16.06■□□□□ 0.16
GGA3-213ENST00000582486 RTEL1-TNFRSF6BF6WH68 1400 aa16.05■□□□□ 0.16
GGA3-213ENST00000582486 ZFYVE16Q7Z3T8 1539 aa16.04■□□□□ 0.16
GGA3-213ENST00000582486 L3MBTL2Q969R5 705 aa16.03■□□□□ 0.16
GGA3-213ENST00000582486 ERBINQ96RT1 1412 aa16.03■□□□□ 0.16
GGA3-213ENST00000582486 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.03■□□□□ 0.162e-7■■■□□ 16.1
GGA3-213ENST00000582486 FAM135AQ9P2D6 1515 aa16.02■□□□□ 0.16
GGA3-213ENST00000582486 MYT1LQ9UL68 1186 aa16.01■□□□□ 0.15
GGA3-213ENST00000582486 UNC13BO14795 1591 aa16.01■□□□□ 0.15
GGA3-213ENST00000582486 ATP7AQ04656 1500 aa16■□□□□ 0.15
GGA3-213ENST00000582486 INO80Q9ULG1 1556 aaPredicted RBP15.99■□□□□ 0.15
GGA3-213ENST00000582486 CFAP74Q9C0B2 1584 aa15.98■□□□□ 0.15
GGA3-213ENST00000582486 TEX14Q8IWB6 1497 aa15.98■□□□□ 0.15
GGA3-213ENST00000582486 ZNF518AQ6AHZ1 1483 aa15.97■□□□□ 0.15
GGA3-213ENST00000582486 MAGI2Q86UL8 1455 aa15.96■□□□□ 0.15
GGA3-213ENST00000582486 HIRIP3Q9BW71 556 aaPredicted RBP15.96■□□□□ 0.15
GGA3-213ENST00000582486 IQGAP3Q86VI3 1631 aa15.95■□□□□ 0.14
GGA3-213ENST00000582486 POGZQ7Z3K3 1410 aa15.95■□□□□ 0.14
GGA3-213ENST00000582486 NEO1Q92859 1461 aa15.94■□□□□ 0.14
GGA3-213ENST00000582486 FAM69CQ0P6D2 419 aa15.94■□□□□ 0.14
GGA3-213ENST00000582486 KIDINS220Q9ULH0 1771 aa15.93■□□□□ 0.14
GGA3-213ENST00000582486 MAP3K4Q9Y6R4 1608 aa15.93■□□□□ 0.14
GGA3-213ENST00000582486 DHX29Q7Z478 1369 aaKnown RBP15.93■□□□□ 0.14
GGA3-213ENST00000582486 GLI2P10070 1586 aa15.93■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms