RNA–Protein interactions for RNA: ENST00000580108.1

DDX42-211, Transcript of DEAD-box helicase 42, humanhuman

TSL 3

Gene DDX42, Length 545 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX42-211ENST00000580108 HS3ST6Q96QI5 342 aa8.78□□□□□ -1
DDX42-211ENST00000580108 FAM205CA6NFA0 338 aa8.77□□□□□ -1.01
DDX42-211ENST00000580108 TAOK2Q9UL54 1235 aa8.77□□□□□ -1.01
DDX42-211ENST00000580108 HOXB1P14653 301 aaPredicted RBP8.75□□□□□ -1.01
DDX42-211ENST00000580108 DOK7Q18PE1 504 aa8.75□□□□□ -1.01
DDX42-211ENST00000580108 KRTAP3-3Q9BYR6 98 aa8.74□□□□□ -1.01
DDX42-211ENST00000580108 KRTAP3-2Q9BYR7 98 aa8.74□□□□□ -1.01
DDX42-211ENST00000580108 SPNS2Q8IVW8 549 aa8.73□□□□□ -1.01
DDX42-211ENST00000580108 ZNF710Q8N1W2 664 aa8.73□□□□□ -1.01
DDX42-211ENST00000580108 MMRN1Q13201 1228 aa8.7□□□□□ -1.02
DDX42-211ENST00000580108 GPR153Q6NV75 609 aa8.68□□□□□ -1.02
DDX42-211ENST00000580108 KIF3CO14782 793 aa8.67□□□□□ -1.02
DDX42-211ENST00000580108 ERBB3P21860 1342 aa8.66□□□□□ -1.02
DDX42-211ENST00000580108 RIMBP2O15034 1052 aa8.66□□□□□ -1.02
DDX42-211ENST00000580108 PPP1R37O75864 691 aa8.66□□□□□ -1.02
DDX42-211ENST00000580108 ZSWIM6Q9HCJ5 1215 aa8.66□□□□□ -1.02
DDX42-211ENST00000580108 C2orf72A6NCS6 295 aa8.65□□□□□ -1.02
DDX42-211ENST00000580108 VARS2Q5ST30 1063 aaKnown RBP8.64□□□□□ -1.03
DDX42-211ENST00000580108 KHSRPQ92945 711 aaKnown RBP eCLIP8.64□□□□□ -1.031e-7■■□□□ 13.6
DDX42-211ENST00000580108 ARSIQ5FYB1 569 aa8.63□□□□□ -1.03
DDX42-211ENST00000580108 HS6ST3Q8IZP7 471 aa8.62□□□□□ -1.03
DDX42-211ENST00000580108 ZNF687Q8N1G0 1237 aa8.57□□□□□ -1.04
DDX42-211ENST00000580108 CHGAP10645 457 aaKnown RBP8.56□□□□□ -1.04
DDX42-211ENST00000580108 NKX1-1Q15270 411 aaPredicted RBP8.56□□□□□ -1.04
DDX42-211ENST00000580108 ZNF316A6NFI3 1004 aaPredicted RBP8.55□□□□□ -1.04
DDX42-211ENST00000580108 TMC2Q8TDI7 906 aa8.55□□□□□ -1.04
DDX42-211ENST00000580108 SLC34A2O95436 690 aa8.53□□□□□ -1.04
DDX42-211ENST00000580108 NUDT7P0C024 238 aa8.53□□□□□ -1.04
DDX42-211ENST00000580108 PCDHGA4Q9Y5G9 962 aa8.53□□□□□ -1.04
DDX42-211ENST00000580108 DNAJC5Q9H3Z4 198 aa8.51□□□□□ -1.05
DDX42-211ENST00000580108 LHX6Q9UPM6 363 aa8.49□□□□□ -1.05
DDX42-211ENST00000580108 POTEEQ6S8J3 1075 aa8.47□□□□□ -1.05
DDX42-211ENST00000580108 KDM4FA0A1W2PPD8 638 aa8.46□□□□□ -1.06
DDX42-211ENST00000580108 FOXK1P85037 733 aa8.46□□□□□ -1.06
DDX42-211ENST00000580108 DSG2Q14126 1118 aa8.46□□□□□ -1.06
DDX42-211ENST00000580108 GPHNQ9NQX3 736 aaPredicted RBP8.46□□□□□ -1.06
DDX42-211ENST00000580108 PLPP6Q8IY26 295 aa8.45□□□□□ -1.06
DDX42-211ENST00000580108 PTCD2Q8WV60 388 aaKnown RBP8.45□□□□□ -1.06
DDX42-211ENST00000580108 LSM11P83369 360 aaKnown RBP eCLIP8.44□□□□□ -1.06
DDX42-211ENST00000580108 RNF166Q96A37 237 aaPredicted RBP8.44□□□□□ -1.06
DDX42-211ENST00000580108 ANKRD13DQ6ZTN6 518 aa8.43□□□□□ -1.06
DDX42-211ENST00000580108 MYT1LQ9UL68 1186 aa8.43□□□□□ -1.06
DDX42-211ENST00000580108 AXIN2Q9Y2T1 843 aa8.42□□□□□ -1.06
DDX42-211ENST00000580108 GTPBP6O43824 516 aaPredicted RBP8.4□□□□□ -1.06
DDX42-211ENST00000580108 PBX2P40425 430 aa8.4□□□□□ -1.06
DDX42-211ENST00000580108 CRISPLD2Q9H0B8 497 aa8.4□□□□□ -1.06
DDX42-211ENST00000580108 NCKAP5LQ9HCH0 1330 aa8.38□□□□□ -1.07
DDX42-211ENST00000580108 PTGER2P43116 358 aa8.37□□□□□ -1.07
DDX42-211ENST00000580108 RYDENQ9NUL5 291 aaKnown RBP8.37□□□□□ -1.07
DDX42-211ENST00000580108 OXER1Q8TDS5 423 aa8.35□□□□□ -1.07
DDX42-211ENST00000580108 PSDA5PKW4 1024 aaPredicted RBP8.34□□□□□ -1.07
DDX42-211ENST00000580108 PPP1R15BQ5SWA1 713 aa8.34□□□□□ -1.07
DDX42-211ENST00000580108 UPF1Q92900 1129 aaKnown RBP eCLIP8.34□□□□□ -1.07
DDX42-211ENST00000580108 ARHGAP33O14559 1287 aa8.33□□□□□ -1.08
DDX42-211ENST00000580108 DMRTA1Q5VZB9 504 aa8.33□□□□□ -1.08
DDX42-211ENST00000580108 RB1CC1Q8TDY2 1594 aa8.33□□□□□ -1.08
DDX42-211ENST00000580108 TBC1D12O60347 775 aa8.32□□□□□ -1.08
DDX42-211ENST00000580108 DCAF8L2P0C7V8 631 aa8.32□□□□□ -1.08
DDX42-211ENST00000580108 PSEN2P49810 448 aa8.32□□□□□ -1.08
DDX42-211ENST00000580108 ADGRD1Q6QNK2 874 aa8.3□□□□□ -1.08
DDX42-211ENST00000580108 PDE4AP27815 886 aa8.29□□□□□ -1.08
DDX42-211ENST00000580108 PPP4R3BQ5MIZ7 849 aa8.29□□□□□ -1.08
DDX42-211ENST00000580108 CADPS2Q86UW7 1296 aa8.28□□□□□ -1.08
DDX42-211ENST00000580108 UNC13AQ9UPW8 1703 aa8.27□□□□□ -1.09
DDX42-211ENST00000580108 HRO43593 1189 aa8.27□□□□□ -1.09
DDX42-211ENST00000580108 MFSD10Q14728 455 aa8.27□□□□□ -1.09
DDX42-211ENST00000580108 LARP6Q9BRS8 491 aaKnown RBP8.27□□□□□ -1.09
DDX42-211ENST00000580108 NACADO15069 1562 aa8.27□□□□□ -1.09
DDX42-211ENST00000580108 TK2O00142 265 aa8.26□□□□□ -1.09
DDX42-211ENST00000580108 KCNK17Q96T54 332 aa8.26□□□□□ -1.09
DDX42-211ENST00000580108 ZNF454Q8N9F8 522 aa8.25□□□□□ -1.09
DDX42-211ENST00000580108 DDX27Q96GQ7 796 aaKnown RBP8.25□□□□□ -1.09
DDX42-211ENST00000580108 EMILIN3Q9NT22 766 aa8.24□□□□□ -1.09
DDX42-211ENST00000580108 FOSBP53539 338 aa8.23□□□□□ -1.09
DDX42-211ENST00000580108 ANO8Q9HCE9 1232 aaPredicted RBP8.23□□□□□ -1.09
DDX42-211ENST00000580108 EVI5O60447 810 aa8.22□□□□□ -1.09
DDX42-211ENST00000580108 BCL2L12Q9HB09 334 aa8.22□□□□□ -1.09
DDX42-211ENST00000580108 VPS9D1Q9Y2B5 631 aa8.2□□□□□ -1.1
DDX42-211ENST00000580108 JPH4Q96JJ6 628 aa8.19□□□□□ -1.1
DDX42-211ENST00000580108 ZCCHC6Q5VYS8 1495 aaKnown RBP8.19□□□□□ -1.1
DDX42-211ENST00000580108 ADAM33Q9BZ11 813 aa8.18□□□□□ -1.1
DDX42-211ENST00000580108 MAP3K9P80192 1104 aa8.17□□□□□ -1.1
DDX42-211ENST00000580108 HCSTQ9UBK5 93 aa8.17□□□□□ -1.1
DDX42-211ENST00000580108 KCTD12Q96CX2 325 aaKnown RBP8.16□□□□□ -1.1
DDX42-211ENST00000580108 KCNH8Q96L42 1107 aa8.16□□□□□ -1.1
DDX42-211ENST00000580108 SLC4A5Q9BY07 1137 aa8.16□□□□□ -1.1
DDX42-211ENST00000580108 BICRAQ9NZM4 1560 aa8.15□□□□□ -1.1
DDX42-211ENST00000580108 PTPREP23469 700 aa8.15□□□□□ -1.1
DDX42-211ENST00000580108 ZDHHC16Q969W1 377 aa8.15□□□□□ -1.1
DDX42-211ENST00000580108 ZBED2Q9BTP6 218 aa8.15□□□□□ -1.1
DDX42-211ENST00000580108 BHMG1C9JSJ3 638 aaPredicted RBP8.14□□□□□ -1.11
DDX42-211ENST00000580108 CAMK2BQ13554 666 aa8.14□□□□□ -1.11
DDX42-211ENST00000580108 BBXQ8WY36 941 aaPredicted RBP8.14□□□□□ -1.11
DDX42-211ENST00000580108 PCDHGA10Q9Y5H3 936 aa8.13□□□□□ -1.11
DDX42-211ENST00000580108 MYO15BQ96JP2 1530 aa8.13□□□□□ -1.11
DDX42-211ENST00000580108 PLA2G2EQ9NZK7 142 aa8.12□□□□□ -1.11
DDX42-211ENST00000580108 SCRIBQ14160 1630 aa8.11□□□□□ -1.11
DDX42-211ENST00000580108 DPYSL4O14531 572 aa8.1□□□□□ -1.11
DDX42-211ENST00000580108 COL9A1P20849 921 aa8.1□□□□□ -1.11
DDX42-211ENST00000580108 STAC3Q96MF2 364 aa8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms