RNA–Protein interactions for RNA: ENST00000579853.5

CDK5RAP3-216, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 714 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-216ENST00000579853 HECW1Q76N89 1606 aa20.45■□□□□ 0.87
CDK5RAP3-216ENST00000579853 PLCH2O75038 1416 aa20.45■□□□□ 0.86
CDK5RAP3-216ENST00000579853 SCAPERQ9BY12 1400 aa20.45■□□□□ 0.86
CDK5RAP3-216ENST00000579853 MLECQ14165 292 aa20.45■□□□□ 0.86
CDK5RAP3-216ENST00000579853 ATP10AO60312 1499 aa20.43■□□□□ 0.86
CDK5RAP3-216ENST00000579853 SIGLEC1Q9BZZ2 1709 aa20.42■□□□□ 0.86
CDK5RAP3-216ENST00000579853 EFCAB2Q5VUJ9 269 aa20.41■□□□□ 0.86
CDK5RAP3-216ENST00000579853 C9orf84Q5VXU9 1444 aa20.4■□□□□ 0.86
CDK5RAP3-216ENST00000579853 CDK11AQ9UQ88 783 aaPredicted RBP20.4■□□□□ 0.86
CDK5RAP3-216ENST00000579853 DMRT2Q9Y5R5 561 aa20.4■□□□□ 0.86
CDK5RAP3-216ENST00000579853 CDK13Q14004 1512 aaKnown RBP20.39■□□□□ 0.85
CDK5RAP3-216ENST00000579853 ARHGEF12Q9NZN5 1544 aa20.39■□□□□ 0.85
CDK5RAP3-216ENST00000579853 PREX1Q8TCU6 1659 aa20.38■□□□□ 0.85
CDK5RAP3-216ENST00000579853 SETD1BQ9UPS6 1966 aaKnown RBP20.37■□□□□ 0.85
CDK5RAP3-216ENST00000579853 MYO5CQ9NQX4 1742 aa20.36■□□□□ 0.85
CDK5RAP3-216ENST00000579853 FMN1Q68DA7 1419 aa20.36■□□□□ 0.85
CDK5RAP3-216ENST00000579853 ZNF518AQ6AHZ1 1483 aa20.35■□□□□ 0.85
CDK5RAP3-216ENST00000579853 ATP1B4Q9UN42 357 aaPredicted RBP20.32■□□□□ 0.84
CDK5RAP3-216ENST00000579853 UHRF1BP1Q6BDS2 1440 aa20.31■□□□□ 0.84
CDK5RAP3-216ENST00000579853 CEBPAP49715 358 aaPredicted RBP20.29■□□□□ 0.84
CDK5RAP3-216ENST00000579853 KIF14Q15058 1648 aa20.28■□□□□ 0.84
CDK5RAP3-216ENST00000579853 KDM5CP41229 1560 aa20.28■□□□□ 0.84
CDK5RAP3-216ENST00000579853 CLIP1P30622 1438 aa20.27■□□□□ 0.84
CDK5RAP3-216ENST00000579853 MYT1LQ9UL68 1186 aa20.27■□□□□ 0.84
CDK5RAP3-216ENST00000579853 ARHGAP5Q13017 1502 aa20.27■□□□□ 0.83
CDK5RAP3-216ENST00000579853 TROQ12816 1431 aaPredicted RBP20.27■□□□□ 0.83
CDK5RAP3-216ENST00000579853 AFAP1Q8N556 730 aa20.26■□□□□ 0.83
CDK5RAP3-216ENST00000579853 REREQ9P2R6 1566 aa20.25■□□□□ 0.83
CDK5RAP3-216ENST00000579853 UBTFP17480 764 aaKnown RBP20.25■□□□□ 0.83
CDK5RAP3-216ENST00000579853 STRCQ7RTU9 1775 aa20.25■□□□□ 0.83
CDK5RAP3-216ENST00000579853 ESF1Q9H501 851 aaKnown RBP20.24■□□□□ 0.83
CDK5RAP3-216ENST00000579853 DISP3Q9P2K9 1392 aa20.23■□□□□ 0.83
CDK5RAP3-216ENST00000579853 PTPRTO14522 1441 aa20.22■□□□□ 0.83
CDK5RAP3-216ENST00000579853 MLH3Q9UHC1 1453 aa20.22■□□□□ 0.83
CDK5RAP3-216ENST00000579853 DIP2CQ9Y2E4 1556 aa20.21■□□□□ 0.83
CDK5RAP3-216ENST00000579853 ARHGAP35Q9NRY4 1499 aa20.21■□□□□ 0.83
CDK5RAP3-216ENST00000579853 AGLP35573 1532 aa20.19■□□□□ 0.82
CDK5RAP3-216ENST00000579853 TRAPPC8Q9Y2L5 1435 aa20.18■□□□□ 0.82
CDK5RAP3-216ENST00000579853 SOCS7O14512 581 aa20.17■□□□□ 0.82
CDK5RAP3-216ENST00000579853 CNTLNQ9NXG0 1405 aa20.16■□□□□ 0.82
CDK5RAP3-216ENST00000579853 C3P01024 1663 aa20.16■□□□□ 0.82
CDK5RAP3-216ENST00000579853 ABCA6Q8N139 1617 aa20.15■□□□□ 0.82
CDK5RAP3-216ENST00000579853 CDC42BPBQ9Y5S2 1711 aa20.15■□□□□ 0.82
CDK5RAP3-216ENST00000579853 IQSEC2Q5JU85 1478 aa20.14■□□□□ 0.81
CDK5RAP3-216ENST00000579853 PREX2Q70Z35 1606 aa20.13■□□□□ 0.81
CDK5RAP3-216ENST00000579853 ILDR2Q71H61 639 aa20.12■□□□□ 0.81
CDK5RAP3-216ENST00000579853 ABCC1P33527 1531 aa20.12■□□□□ 0.81
CDK5RAP3-216ENST00000579853 CCDC18Q5T9S5 1454 aa20.11■□□□□ 0.81
CDK5RAP3-216ENST00000579853 EHMT2Q96KQ7 1210 aa20.1■□□□□ 0.81
CDK5RAP3-216ENST00000579853 ITSN2Q9NZM3 1697 aa20.09■□□□□ 0.81
CDK5RAP3-216ENST00000579853 NCOA1Q15788 1441 aa20.09■□□□□ 0.81
CDK5RAP3-216ENST00000579853 LRRIQ1Q96JM4 1722 aa20.08■□□□□ 0.81
CDK5RAP3-216ENST00000579853 LTBP4Q8N2S1 1624 aa20.08■□□□□ 0.8
CDK5RAP3-216ENST00000579853 NPATQ14207 1427 aa20.08■□□□□ 0.8
CDK5RAP3-216ENST00000579853 FOXD1Q16676 465 aa20.07■□□□□ 0.8
CDK5RAP3-216ENST00000579853 SPATA31D1Q6ZQQ2 1576 aa20.07■□□□□ 0.8
CDK5RAP3-216ENST00000579853 KIDINS220Q9ULH0 1771 aa20.06■□□□□ 0.8
CDK5RAP3-216ENST00000579853 CASKIN1Q8WXD9 1431 aa20.06■□□□□ 0.8
CDK5RAP3-216ENST00000579853 MROH2AA6NES4 1674 aa20.04■□□□□ 0.8
CDK5RAP3-216ENST00000579853 CDC42BPAQ5VT25 1732 aa20.02■□□□□ 0.79
CDK5RAP3-216ENST00000579853 ZMYM3Q14202 1370 aa20.01■□□□□ 0.79
CDK5RAP3-216ENST00000579853 CAMSAP1Q5T5Y3 1602 aa20.01■□□□□ 0.79
CDK5RAP3-216ENST00000579853 SAMD9LQ8IVG5 1584 aa20■□□□□ 0.79
CDK5RAP3-216ENST00000579853 SPAG9O60271 1321 aaKnown RBP20■□□□□ 0.79
CDK5RAP3-216ENST00000579853 ZNF777Q9ULD5 760 aaPredicted RBP19.98■□□□□ 0.79
CDK5RAP3-216ENST00000579853 PKD2Q13563 968 aa19.97■□□□□ 0.79
CDK5RAP3-216ENST00000579853 FYCO1Q9BQS8 1478 aa19.97■□□□□ 0.79
CDK5RAP3-216ENST00000579853 PLA2R1Q13018 1463 aa19.96■□□□□ 0.79
CDK5RAP3-216ENST00000579853 PLEKHH2Q8IVE3 1493 aa19.96■□□□□ 0.79
CDK5RAP3-216ENST00000579853 KIAA1107Q9UPP5 1409 aa19.95■□□□□ 0.78
CDK5RAP3-216ENST00000579853 PPP6R1Q9UPN7 881 aa19.95■□□□□ 0.78
CDK5RAP3-216ENST00000579853 SYCP2Q9BX26 1530 aa19.95■□□□□ 0.78
CDK5RAP3-216ENST00000579853 SUPT6HQ7KZ85 1726 aaKnown RBP19.93■□□□□ 0.78
CDK5RAP3-216ENST00000579853 ATP7AQ04656 1500 aa19.93■□□□□ 0.78
CDK5RAP3-216ENST00000579853 GPATCH8Q9UKJ3 1502 aaKnown RBP19.93■□□□□ 0.78
CDK5RAP3-216ENST00000579853 UBAP1LF5GYI3 381 aa19.93■□□□□ 0.78
CDK5RAP3-216ENST00000579853 NCKAP5LQ9HCH0 1330 aa19.93■□□□□ 0.78
CDK5RAP3-216ENST00000579853 ZNF142P52746 1687 aaPredicted RBP19.93■□□□□ 0.78
CDK5RAP3-216ENST00000579853 HNRNPMP52272 730 aaKnown RBP eCLIP19.92■□□□□ 0.78
CDK5RAP3-216ENST00000579853 CFDP1Q9UEE9 299 aaPredicted RBP19.91■□□□□ 0.78
CDK5RAP3-216ENST00000579853 ZNF335Q9H4Z2 1342 aaPredicted RBP19.91■□□□□ 0.78
CDK5RAP3-216ENST00000579853 A2MP01023 1474 aa19.91■□□□□ 0.78
CDK5RAP3-216ENST00000579853 PLXNC1O60486 1568 aa19.91■□□□□ 0.78
CDK5RAP3-216ENST00000579853 MYO3AQ8NEV4 1616 aa19.9■□□□□ 0.78
CDK5RAP3-216ENST00000579853 CLTCQ00610 1675 aaKnown RBP19.9■□□□□ 0.78
CDK5RAP3-216ENST00000579853 TCOF1Q13428 1488 aaKnown RBP19.89■□□□□ 0.77
CDK5RAP3-216ENST00000579853 PTPRKQ15262 1439 aa19.89■□□□□ 0.77
CDK5RAP3-216ENST00000579853 CEP170BQ9Y4F5 1589 aaPredicted RBP19.89■□□□□ 0.77
CDK5RAP3-216ENST00000579853 INO80Q9ULG1 1556 aaPredicted RBP19.88■□□□□ 0.77
CDK5RAP3-216ENST00000579853 GGT6Q6P531 493 aa19.88■□□□□ 0.77
CDK5RAP3-216ENST00000579853 CCNB3Q8WWL7 1395 aa19.87■□□□□ 0.77
CDK5RAP3-216ENST00000579853 ADGBQ8N7X0 1667 aa19.83■□□□□ 0.76
CDK5RAP3-216ENST00000579853 A2ML1A8K2U0 1454 aa19.82■□□□□ 0.76
CDK5RAP3-216ENST00000579853 MTUS2Q5JR59 1369 aa19.81■□□□□ 0.76
CDK5RAP3-216ENST00000579853 RTEL1-TNFRSF6BF6WH68 1400 aa19.78■□□□□ 0.76
CDK5RAP3-216ENST00000579853 TOM1O60784 492 aa19.77■□□□□ 0.76
CDK5RAP3-216ENST00000579853 CPS1P31327 1500 aa19.76■□□□□ 0.75
CDK5RAP3-216ENST00000579853 DNMT1P26358 1616 aaKnown RBP19.76■□□□□ 0.75
CDK5RAP3-216ENST00000579853 DHX29Q7Z478 1369 aaKnown RBP19.76■□□□□ 0.75
CDK5RAP3-216ENST00000579853 FAM135AQ9P2D6 1515 aa19.76■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 126.5 ms