RNA–Protein interactions for RNA: ENST00000579466.1

MSI2-208, Transcript of musashi RNA binding protein 2, humanhuman

TSL 3

Gene MSI2, Length 186 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSI2-208ENST00000579466 HSPA2P54652 639 aa16.03■□□□□ 0.16
MSI2-208ENST00000579466 POGZQ7Z3K3 1410 aa16.02■□□□□ 0.16
MSI2-208ENST00000579466 KIF14Q15058 1648 aa16.02■□□□□ 0.16
MSI2-208ENST00000579466 UBTFP17480 764 aaKnown RBP16.02■□□□□ 0.16
MSI2-208ENST00000579466 SCAPERQ9BY12 1400 aa16.02■□□□□ 0.15
MSI2-208ENST00000579466 PLCH2O75038 1416 aa15.98■□□□□ 0.15
MSI2-208ENST00000579466 LRRIQ1Q96JM4 1722 aa15.98■□□□□ 0.15
MSI2-208ENST00000579466 MAGI2Q86UL8 1455 aa15.97■□□□□ 0.15
MSI2-208ENST00000579466 ARHGAP35Q9NRY4 1499 aa15.97■□□□□ 0.15
MSI2-208ENST00000579466 FMN1Q68DA7 1419 aa15.96■□□□□ 0.15
MSI2-208ENST00000579466 ARHGAP5Q13017 1502 aa15.95■□□□□ 0.14
MSI2-208ENST00000579466 C9orf84Q5VXU9 1444 aa15.94■□□□□ 0.14
MSI2-208ENST00000579466 MYT1LQ9UL68 1186 aa15.93■□□□□ 0.14
MSI2-208ENST00000579466 ATP10AO60312 1499 aa15.92■□□□□ 0.14
MSI2-208ENST00000579466 EFCAB2Q5VUJ9 269 aa15.92■□□□□ 0.14
MSI2-208ENST00000579466 ARHGEF12Q9NZN5 1544 aa15.92■□□□□ 0.14
MSI2-208ENST00000579466 PREX1Q8TCU6 1659 aa15.92■□□□□ 0.14
MSI2-208ENST00000579466 TROQ12816 1431 aaPredicted RBP15.91■□□□□ 0.14
MSI2-208ENST00000579466 CDK11AQ9UQ88 783 aaPredicted RBP15.9■□□□□ 0.14
MSI2-208ENST00000579466 CLIP1P30622 1438 aa15.9■□□□□ 0.14
MSI2-208ENST00000579466 CDC42BPBQ9Y5S2 1711 aa15.9■□□□□ 0.14
MSI2-208ENST00000579466 ZNF518AQ6AHZ1 1483 aa15.9■□□□□ 0.14
MSI2-208ENST00000579466 CEBPAP49715 358 aaPredicted RBP15.89■□□□□ 0.13
MSI2-208ENST00000579466 KDM5CP41229 1560 aa15.87■□□□□ 0.13
MSI2-208ENST00000579466 DIP2CQ9Y2E4 1556 aa15.87■□□□□ 0.13
MSI2-208ENST00000579466 ABCA6Q8N139 1617 aa15.87■□□□□ 0.13
MSI2-208ENST00000579466 AFAP1Q8N556 730 aa15.87■□□□□ 0.13
MSI2-208ENST00000579466 PREX2Q70Z35 1606 aa15.86■□□□□ 0.13
MSI2-208ENST00000579466 CHIC1Q5VXU3 224 aa15.85■□□□□ 0.13
MSI2-208ENST00000579466 ITSN2Q9NZM3 1697 aa15.85■□□□□ 0.13
MSI2-208ENST00000579466 CERKQ8TCT0 537 aa15.83■□□□□ 0.12
MSI2-208ENST00000579466 ABCC1P33527 1531 aa15.83■□□□□ 0.12
MSI2-208ENST00000579466 C3P01024 1663 aa15.82■□□□□ 0.12
MSI2-208ENST00000579466 CDC42BPAQ5VT25 1732 aa15.82■□□□□ 0.12
MSI2-208ENST00000579466 STRCQ7RTU9 1775 aa15.81■□□□□ 0.12
MSI2-208ENST00000579466 CCDC18Q5T9S5 1454 aa15.8■□□□□ 0.12
MSI2-208ENST00000579466 UHRF1BP1Q6BDS2 1440 aa15.8■□□□□ 0.12
MSI2-208ENST00000579466 TRAPPC8Q9Y2L5 1435 aa15.8■□□□□ 0.12
MSI2-208ENST00000579466 REREQ9P2R6 1566 aa15.79■□□□□ 0.12
MSI2-208ENST00000579466 CASKIN1Q8WXD9 1431 aa15.78■□□□□ 0.12
MSI2-208ENST00000579466 KIDINS220Q9ULH0 1771 aa15.78■□□□□ 0.12
MSI2-208ENST00000579466 MLH3Q9UHC1 1453 aa15.78■□□□□ 0.12
MSI2-208ENST00000579466 ESF1Q9H501 851 aaKnown RBP15.77■□□□□ 0.12
MSI2-208ENST00000579466 ZNF777Q9ULD5 760 aaPredicted RBP15.77■□□□□ 0.12
MSI2-208ENST00000579466 SETD1BQ9UPS6 1966 aaKnown RBP15.76■□□□□ 0.11
MSI2-208ENST00000579466 SYCP2Q9BX26 1530 aa15.74■□□□□ 0.11
MSI2-208ENST00000579466 SAMD9LQ8IVG5 1584 aa15.74■□□□□ 0.11
MSI2-208ENST00000579466 SUPT6HQ7KZ85 1726 aaKnown RBP15.74■□□□□ 0.11
MSI2-208ENST00000579466 FYCO1Q9BQS8 1478 aa15.73■□□□□ 0.11
MSI2-208ENST00000579466 AGLP35573 1532 aa15.73■□□□□ 0.11
MSI2-208ENST00000579466 DMRT2Q9Y5R5 561 aa15.7■□□□□ 0.1
MSI2-208ENST00000579466 CLTCQ00610 1675 aaKnown RBP15.68■□□□□ 0.1
MSI2-208ENST00000579466 ATP7AQ04656 1500 aa15.67■□□□□ 0.1
MSI2-208ENST00000579466 GPATCH8Q9UKJ3 1502 aaKnown RBP15.67■□□□□ 0.1
MSI2-208ENST00000579466 MROH2AA6NES4 1674 aa15.67■□□□□ 0.1
MSI2-208ENST00000579466 HNRNPMP52272 730 aaKnown RBP eCLIP15.66■□□□□ 0.1
MSI2-208ENST00000579466 CNTLNQ9NXG0 1405 aa15.66■□□□□ 0.1
MSI2-208ENST00000579466 SPAG9O60271 1321 aaKnown RBP15.66■□□□□ 0.1
MSI2-208ENST00000579466 INO80Q9ULG1 1556 aaPredicted RBP15.65■□□□□ 0.1
MSI2-208ENST00000579466 CAMSAP1Q5T5Y3 1602 aa15.65■□□□□ 0.1
MSI2-208ENST00000579466 PTPRTO14522 1441 aa15.64■□□□□ 0.09
MSI2-208ENST00000579466 DISP3Q9P2K9 1392 aa15.63■□□□□ 0.09
MSI2-208ENST00000579466 NCOA1Q15788 1441 aa15.63■□□□□ 0.09
MSI2-208ENST00000579466 MYO3AQ8NEV4 1616 aa15.63■□□□□ 0.09
MSI2-208ENST00000579466 CCNB3Q8WWL7 1395 aa15.62■□□□□ 0.09
MSI2-208ENST00000579466 CFDP1Q9UEE9 299 aaPredicted RBP15.62■□□□□ 0.09
MSI2-208ENST00000579466 PLXNC1O60486 1568 aa15.62■□□□□ 0.09
MSI2-208ENST00000579466 LTBP4Q8N2S1 1624 aa15.61■□□□□ 0.09
MSI2-208ENST00000579466 ZMYM3Q14202 1370 aa15.61■□□□□ 0.09
MSI2-208ENST00000579466 MTUS2Q5JR59 1369 aa15.61■□□□□ 0.09
MSI2-208ENST00000579466 A2MP01023 1474 aa15.6■□□□□ 0.09
MSI2-208ENST00000579466 PLEKHH2Q8IVE3 1493 aa15.59■□□□□ 0.09
MSI2-208ENST00000579466 TIAM1Q13009 1591 aa15.59■□□□□ 0.09
MSI2-208ENST00000579466 SPATA31D1Q6ZQQ2 1576 aa15.59■□□□□ 0.09
MSI2-208ENST00000579466 GGT6Q6P531 493 aa15.59■□□□□ 0.09
MSI2-208ENST00000579466 ZNF142P52746 1687 aaPredicted RBP15.59■□□□□ 0.09
MSI2-208ENST00000579466 ADGBQ8N7X0 1667 aa15.59■□□□□ 0.09
MSI2-208ENST00000579466 NPATQ14207 1427 aa15.59■□□□□ 0.09
MSI2-208ENST00000579466 NCKAP5LQ9HCH0 1330 aa15.58■□□□□ 0.08
MSI2-208ENST00000579466 CEP170BQ9Y4F5 1589 aaPredicted RBP15.58■□□□□ 0.08
MSI2-208ENST00000579466 KIAA1107Q9UPP5 1409 aa15.57■□□□□ 0.08
MSI2-208ENST00000579466 ILDR2Q71H61 639 aa15.56■□□□□ 0.08
MSI2-208ENST00000579466 ZNF644Q9H582 1327 aaPredicted RBP15.56■□□□□ 0.08
MSI2-208ENST00000579466 EHBP1L1Q8N3D4 1523 aa15.56■□□□□ 0.08
MSI2-208ENST00000579466 ZNF335Q9H4Z2 1342 aaPredicted RBP15.54■□□□□ 0.08
MSI2-208ENST00000579466 PTPRKQ15262 1439 aa15.53■□□□□ 0.08
MSI2-208ENST00000579466 IQSEC2Q5JU85 1478 aa15.52■□□□□ 0.07
MSI2-208ENST00000579466 PLA2R1Q13018 1463 aa15.5■□□□□ 0.07
MSI2-208ENST00000579466 MBD5Q9P267 1494 aa15.49■□□□□ 0.07
MSI2-208ENST00000579466 TCOF1Q13428 1488 aaKnown RBP15.48■□□□□ 0.07
MSI2-208ENST00000579466 UBAP1LF5GYI3 381 aa15.48■□□□□ 0.07
MSI2-208ENST00000579466 POLR1AO95602 1720 aaPredicted RBP15.48■□□□□ 0.07
MSI2-208ENST00000579466 CAMSAP2Q08AD1 1489 aa15.47■□□□□ 0.07
MSI2-208ENST00000579466 DNMT1P26358 1616 aaKnown RBP15.47■□□□□ 0.07
MSI2-208ENST00000579466 CEP162Q5TB80 1403 aa15.47■□□□□ 0.07
MSI2-208ENST00000579466 PKD2Q13563 968 aa15.46■□□□□ 0.07
MSI2-208ENST00000579466 A2ML1A8K2U0 1454 aa15.46■□□□□ 0.06
MSI2-208ENST00000579466 NCOA2Q15596 1464 aa15.46■□□□□ 0.06
MSI2-208ENST00000579466 CCDC141Q6ZP82 1450 aa15.46■□□□□ 0.06
MSI2-208ENST00000579466 KIF3BO15066 747 aa15.45■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms