RNA–Protein interactions for RNA: ENST00000577706.1

TOP2A-203, Transcript of DNA topoisomerase II alpha, humanhuman

TSL 2

Gene TOP2A, Length 554 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2A-203ENST00000577706 TAOK2Q9UL54 1235 aa11.01□□□□□ -0.65
TOP2A-203ENST00000577706 VARS2Q5ST30 1063 aaKnown RBP11□□□□□ -0.65
TOP2A-203ENST00000577706 NLRP6P59044 892 aa10.99□□□□□ -0.65
TOP2A-203ENST00000577706 GPR153Q6NV75 609 aa10.98□□□□□ -0.65
TOP2A-203ENST00000577706 BCL11BQ9C0K0 894 aaPredicted RBP10.98□□□□□ -0.65
TOP2A-203ENST00000577706 STK24Q9Y6E0 443 aa10.96□□□□□ -0.65
TOP2A-203ENST00000577706 ZNF687Q8N1G0 1237 aa10.94□□□□□ -0.66
TOP2A-203ENST00000577706 FBXO22Q8NEZ5 403 aa10.94□□□□□ -0.66
TOP2A-203ENST00000577706 ARSIQ5FYB1 569 aa10.92□□□□□ -0.66
TOP2A-203ENST00000577706 RNF166Q96A37 237 aaPredicted RBP10.91□□□□□ -0.66
TOP2A-203ENST00000577706 STK25O00506 426 aa10.9□□□□□ -0.66
TOP2A-203ENST00000577706 MFRPQ9BY79 579 aa10.9□□□□□ -0.66
TOP2A-203ENST00000577706 PTGER2P43116 358 aa10.89□□□□□ -0.67
TOP2A-203ENST00000577706 ECM2O94769 699 aaPredicted RBP10.88□□□□□ -0.67
TOP2A-203ENST00000577706 MYT1LQ9UL68 1186 aa10.87□□□□□ -0.67
TOP2A-203ENST00000577706 KHSRPQ92945 711 aaKnown RBP eCLIP10.85□□□□□ -0.672e-10■■□□□ 12.8
TOP2A-203ENST00000577706 ZNF316A6NFI3 1004 aaPredicted RBP10.84□□□□□ -0.67
TOP2A-203ENST00000577706 C2orf72A6NCS6 295 aa10.83□□□□□ -0.68
TOP2A-203ENST00000577706 KIF3CO14782 793 aa10.82□□□□□ -0.68
TOP2A-203ENST00000577706 PKD2Q13563 968 aa10.81□□□□□ -0.68
TOP2A-203ENST00000577706 ANKRD13DQ6ZTN6 518 aa10.8□□□□□ -0.68
TOP2A-203ENST00000577706 RGL2O15211 777 aa10.79□□□□□ -0.68
TOP2A-203ENST00000577706 NUDT7P0C024 238 aa10.76□□□□□ -0.69
TOP2A-203ENST00000577706 TMC2Q8TDI7 906 aa10.76□□□□□ -0.69
TOP2A-203ENST00000577706 SLC34A2O95436 690 aa10.74□□□□□ -0.69
TOP2A-203ENST00000577706 LSM11P83369 360 aaKnown RBP eCLIP10.74□□□□□ -0.69
TOP2A-203ENST00000577706 PBX2P40425 430 aa10.73□□□□□ -0.69
TOP2A-203ENST00000577706 PCDHGA4Q9Y5G9 962 aa10.73□□□□□ -0.69
TOP2A-203ENST00000577706 LHX6Q9UPM6 363 aa10.72□□□□□ -0.69
TOP2A-203ENST00000577706 PPP1R37O75864 691 aa10.69□□□□□ -0.7
TOP2A-203ENST00000577706 AXIN2Q9Y2T1 843 aa10.66□□□□□ -0.7
TOP2A-203ENST00000577706 POTEEQ6S8J3 1075 aa10.65□□□□□ -0.7
TOP2A-203ENST00000577706 PSDA5PKW4 1024 aaPredicted RBP10.62□□□□□ -0.71
TOP2A-203ENST00000577706 PTCD2Q8WV60 388 aaKnown RBP10.6□□□□□ -0.71
TOP2A-203ENST00000577706 ARHGAP33O14559 1287 aa10.59□□□□□ -0.71
TOP2A-203ENST00000577706 FOXK1P85037 733 aa10.58□□□□□ -0.72
TOP2A-203ENST00000577706 KDM4FA0A1W2PPD8 638 aa10.57□□□□□ -0.72
TOP2A-203ENST00000577706 PLPP6Q8IY26 295 aa10.57□□□□□ -0.72
TOP2A-203ENST00000577706 HS6ST3Q8IZP7 471 aa10.57□□□□□ -0.72
TOP2A-203ENST00000577706 ADGRD1Q6QNK2 874 aa10.56□□□□□ -0.72
TOP2A-203ENST00000577706 RTN4Q9NQC3 1192 aaKnown RBP10.56□□□□□ -0.72
TOP2A-203ENST00000577706 GPHNQ9NQX3 736 aaPredicted RBP10.56□□□□□ -0.72
TOP2A-203ENST00000577706 HCSTQ9UBK5 93 aa10.55□□□□□ -0.72
TOP2A-203ENST00000577706 TBC1D12O60347 775 aa10.53□□□□□ -0.72
TOP2A-203ENST00000577706 AMER1Q5JTC6 1135 aaPredicted RBP10.53□□□□□ -0.72
TOP2A-203ENST00000577706 DSG2Q14126 1118 aa10.52□□□□□ -0.73
TOP2A-203ENST00000577706 TK2O00142 265 aa10.51□□□□□ -0.73
TOP2A-203ENST00000577706 PPP4R3BQ5MIZ7 849 aa10.51□□□□□ -0.73
TOP2A-203ENST00000577706 CHGAP10645 457 aaKnown RBP10.5□□□□□ -0.73
TOP2A-203ENST00000577706 PSEN2P49810 448 aa10.5□□□□□ -0.73
TOP2A-203ENST00000577706 DMRTA1Q5VZB9 504 aa10.5□□□□□ -0.73
TOP2A-203ENST00000577706 PLA2G2EQ9NZK7 142 aa10.49□□□□□ -0.73
TOP2A-203ENST00000577706 HRO43593 1189 aa10.47□□□□□ -0.73
TOP2A-203ENST00000577706 STAC3Q96MF2 364 aa10.45□□□□□ -0.74
TOP2A-203ENST00000577706 KCNH8Q96L42 1107 aa10.44□□□□□ -0.74
TOP2A-203ENST00000577706 DCAF8L2P0C7V8 631 aa10.43□□□□□ -0.74
TOP2A-203ENST00000577706 RYDENQ9NUL5 291 aaKnown RBP10.43□□□□□ -0.74
TOP2A-203ENST00000577706 OXER1Q8TDS5 423 aa10.42□□□□□ -0.74
TOP2A-203ENST00000577706 KCNK17Q96T54 332 aa10.42□□□□□ -0.74
TOP2A-203ENST00000577706 DNAJC5Q9H3Z4 198 aa10.42□□□□□ -0.74
TOP2A-203ENST00000577706 NKX1-1Q15270 411 aaPredicted RBP10.41□□□□□ -0.74
TOP2A-203ENST00000577706 UPF1Q92900 1129 aaKnown RBP eCLIP10.41□□□□□ -0.74
TOP2A-203ENST00000577706 KCTD12Q96CX2 325 aaKnown RBP10.4□□□□□ -0.74
TOP2A-203ENST00000577706 ZNF454Q8N9F8 522 aa10.38□□□□□ -0.75
TOP2A-203ENST00000577706 CRISPLD2Q9H0B8 497 aa10.38□□□□□ -0.75
TOP2A-203ENST00000577706 PPP1R15BQ5SWA1 713 aa10.36□□□□□ -0.75
TOP2A-203ENST00000577706 VPS9D1Q9Y2B5 631 aa10.36□□□□□ -0.75
TOP2A-203ENST00000577706 PDE4AP27815 886 aa10.34□□□□□ -0.75
TOP2A-203ENST00000577706 BCL2L12Q9HB09 334 aa10.34□□□□□ -0.75
TOP2A-203ENST00000577706 SLC4A5Q9BY07 1137 aa10.32□□□□□ -0.76
TOP2A-203ENST00000577706 FOSBP53539 338 aa10.31□□□□□ -0.76
TOP2A-203ENST00000577706 NCKAP5LQ9HCH0 1330 aa10.31□□□□□ -0.76
TOP2A-203ENST00000577706 PTPREP23469 700 aa10.3□□□□□ -0.76
TOP2A-203ENST00000577706 PTPN5P54829 565 aa10.3□□□□□ -0.76
TOP2A-203ENST00000577706 ANO8Q9HCE9 1232 aaPredicted RBP10.29□□□□□ -0.76
TOP2A-203ENST00000577706 BHMG1C9JSJ3 638 aaPredicted RBP10.27□□□□□ -0.77
TOP2A-203ENST00000577706 EVI5O60447 810 aa10.27□□□□□ -0.77
TOP2A-203ENST00000577706 JPH4Q96JJ6 628 aa10.26□□□□□ -0.77
TOP2A-203ENST00000577706 LARP6Q9BRS8 491 aaKnown RBP10.26□□□□□ -0.77
TOP2A-203ENST00000577706 ZBED2Q9BTP6 218 aa10.26□□□□□ -0.77
TOP2A-203ENST00000577706 GOLGA8CPA6NN73 597 aa10.25□□□□□ -0.77
TOP2A-203ENST00000577706 GTPBP6O43824 516 aaPredicted RBP10.25□□□□□ -0.77
TOP2A-203ENST00000577706 RGS20O76081 388 aa10.25□□□□□ -0.77
TOP2A-203ENST00000577706 ZDHHC16Q969W1 377 aa10.25□□□□□ -0.77
TOP2A-203ENST00000577706 DDX27Q96GQ7 796 aaKnown RBP10.25□□□□□ -0.77
TOP2A-203ENST00000577706 MAP3K9P80192 1104 aa10.24□□□□□ -0.77
TOP2A-203ENST00000577706 IFFO2Q5TF58 517 aa10.24□□□□□ -0.77
TOP2A-203ENST00000577706 THSD4Q6ZMP0 1018 aa10.23□□□□□ -0.77
TOP2A-203ENST00000577706 MRPL50Q8N5N7 158 aaKnown RBP10.23□□□□□ -0.77
TOP2A-203ENST00000577706 ADAM33Q9BZ11 813 aa10.23□□□□□ -0.77
TOP2A-203ENST00000577706 WNT2BQ93097 391 aa10.22□□□□□ -0.77
TOP2A-203ENST00000577706 MFSD10Q14728 455 aa10.2□□□□□ -0.78
TOP2A-203ENST00000577706 NBPF3Q9H094 633 aa10.2□□□□□ -0.78
TOP2A-203ENST00000577706 BBXQ8WY36 941 aaPredicted RBP10.18□□□□□ -0.78
TOP2A-203ENST00000577706 EMILIN3Q9NT22 766 aa10.16□□□□□ -0.78
TOP2A-203ENST00000577706 PCDHGA10Q9Y5H3 936 aa10.15□□□□□ -0.78
TOP2A-203ENST00000577706 PPP1R3GB7ZBB8 358 aa10.14□□□□□ -0.79
TOP2A-203ENST00000577706 RABGEF1Q9UJ41 708 aa10.13□□□□□ -0.79
TOP2A-203ENST00000577706 A0A0G2JS52 829 aa10.12□□□□□ -0.79
TOP2A-203ENST00000577706 PROX2Q3B8N5 592 aa10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 77.5 ms