RNA–Protein interactions for RNA: ENST00000575515.1

NDC80-204, Transcript of NDC80, kinetochore complex component, humanhuman

TSL 5

Gene NDC80, Length 553 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDC80-204ENST00000575515 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.81■□□□□ 0.28
NDC80-204ENST00000575515 STRCQ7RTU9 1775 aa16.8■□□□□ 0.28
NDC80-204ENST00000575515 MAGI2Q86UL8 1455 aa16.8■□□□□ 0.28
NDC80-204ENST00000575515 PLEKHD1A6NEE1 506 aa16.79■□□□□ 0.28
NDC80-204ENST00000575515 ARHGEF12Q9NZN5 1544 aa16.76■□□□□ 0.27
NDC80-204ENST00000575515 RANGAP1P46060 587 aaPredicted RBP16.76■□□□□ 0.27
NDC80-204ENST00000575515 MYO5CQ9NQX4 1742 aa16.73■□□□□ 0.27
NDC80-204ENST00000575515 SETD1BQ9UPS6 1966 aaKnown RBP16.73■□□□□ 0.27
NDC80-204ENST00000575515 DMRT2Q9Y5R5 561 aa16.73■□□□□ 0.27
NDC80-204ENST00000575515 C9orf84Q5VXU9 1444 aa16.71■□□□□ 0.27
NDC80-204ENST00000575515 SCAPERQ9BY12 1400 aa16.71■□□□□ 0.27
NDC80-204ENST00000575515 ATP10AO60312 1499 aa16.71■□□□□ 0.27
NDC80-204ENST00000575515 UHRF1BP1Q6BDS2 1440 aa16.7■□□□□ 0.26
NDC80-204ENST00000575515 CEBPAP49715 358 aaPredicted RBP16.7■□□□□ 0.26
NDC80-204ENST00000575515 CDK13Q14004 1512 aaKnown RBP16.68■□□□□ 0.26
NDC80-204ENST00000575515 C3P01024 1663 aa16.67■□□□□ 0.26
NDC80-204ENST00000575515 PLCH2O75038 1416 aa16.65■□□□□ 0.26
NDC80-204ENST00000575515 CSRNP3Q8WYN3 585 aa16.64■□□□□ 0.25
NDC80-204ENST00000575515 PTPRTO14522 1441 aa16.62■□□□□ 0.25
NDC80-204ENST00000575515 ZNF518AQ6AHZ1 1483 aa16.61■□□□□ 0.25
NDC80-204ENST00000575515 MYT1LQ9UL68 1186 aa16.61■□□□□ 0.25
NDC80-204ENST00000575515 DIP2CQ9Y2E4 1556 aa16.6■□□□□ 0.25
NDC80-204ENST00000575515 LTBP4Q8N2S1 1624 aa16.6■□□□□ 0.25
NDC80-204ENST00000575515 KDM5CP41229 1560 aa16.6■□□□□ 0.25
NDC80-204ENST00000575515 KIF14Q15058 1648 aa16.59■□□□□ 0.25
NDC80-204ENST00000575515 EFCAB2Q5VUJ9 269 aa16.59■□□□□ 0.25
NDC80-204ENST00000575515 IQSEC2Q5JU85 1478 aa16.59■□□□□ 0.25
NDC80-204ENST00000575515 ARHGAP5Q13017 1502 aa16.58■□□□□ 0.24
NDC80-204ENST00000575515 ABCA6Q8N139 1617 aa16.58■□□□□ 0.24
NDC80-204ENST00000575515 ESF1Q9H501 851 aaKnown RBP16.57■□□□□ 0.24
NDC80-204ENST00000575515 REREQ9P2R6 1566 aa16.56■□□□□ 0.24
NDC80-204ENST00000575515 SUPT6HQ7KZ85 1726 aaKnown RBP16.56■□□□□ 0.24
NDC80-204ENST00000575515 ATP1B4Q9UN42 357 aaPredicted RBP16.55■□□□□ 0.24
NDC80-204ENST00000575515 AFAP1Q8N556 730 aa16.53■□□□□ 0.24
NDC80-204ENST00000575515 CDC42BPBQ9Y5S2 1711 aa16.53■□□□□ 0.24
NDC80-204ENST00000575515 NCOA1Q15788 1441 aa16.53■□□□□ 0.24
NDC80-204ENST00000575515 EEA1Q15075 1411 aa16.52■□□□□ 0.23
NDC80-204ENST00000575515 TRAPPC8Q9Y2L5 1435 aa16.52■□□□□ 0.23
NDC80-204ENST00000575515 CAMSAP1Q5T5Y3 1602 aa16.51■□□□□ 0.23
NDC80-204ENST00000575515 ITSN2Q9NZM3 1697 aa16.5■□□□□ 0.23
NDC80-204ENST00000575515 AGLP35573 1532 aa16.5■□□□□ 0.23
NDC80-204ENST00000575515 CDK11AQ9UQ88 783 aaPredicted RBP16.49■□□□□ 0.23
NDC80-204ENST00000575515 MROH2AA6NES4 1674 aa16.49■□□□□ 0.23
NDC80-204ENST00000575515 LRRIQ1Q96JM4 1722 aa16.48■□□□□ 0.23
NDC80-204ENST00000575515 CLIP1P30622 1438 aa16.48■□□□□ 0.23
NDC80-204ENST00000575515 PREX2Q70Z35 1606 aa16.48■□□□□ 0.23
NDC80-204ENST00000575515 MLH3Q9UHC1 1453 aa16.48■□□□□ 0.23
NDC80-204ENST00000575515 FMN1Q68DA7 1419 aa16.47■□□□□ 0.23
NDC80-204ENST00000575515 KIDINS220Q9ULH0 1771 aa16.47■□□□□ 0.23
NDC80-204ENST00000575515 UBAP1LF5GYI3 381 aa16.47■□□□□ 0.23
NDC80-204ENST00000575515 TROQ12816 1431 aaPredicted RBP16.46■□□□□ 0.23
NDC80-204ENST00000575515 CNTLNQ9NXG0 1405 aa16.46■□□□□ 0.23
NDC80-204ENST00000575515 ABCC1P33527 1531 aa16.45■□□□□ 0.22
NDC80-204ENST00000575515 ZNF142P52746 1687 aaPredicted RBP16.44■□□□□ 0.22
NDC80-204ENST00000575515 MYO3AQ8NEV4 1616 aa16.44■□□□□ 0.22
NDC80-204ENST00000575515 CLTCQ00610 1675 aaKnown RBP16.43■□□□□ 0.22
NDC80-204ENST00000575515 ZNF335Q9H4Z2 1342 aaPredicted RBP16.43■□□□□ 0.22
NDC80-204ENST00000575515 NPATQ14207 1427 aa16.42■□□□□ 0.22
NDC80-204ENST00000575515 CDC42BPAQ5VT25 1732 aa16.41■□□□□ 0.22
NDC80-204ENST00000575515 NCKAP5LQ9HCH0 1330 aa16.41■□□□□ 0.22
NDC80-204ENST00000575515 MED1Q15648 1581 aaPredicted RBP16.4■□□□□ 0.22
NDC80-204ENST00000575515 CEP170BQ9Y4F5 1589 aaPredicted RBP16.38■□□□□ 0.21
NDC80-204ENST00000575515 ARHGAP35Q9NRY4 1499 aa16.38■□□□□ 0.21
NDC80-204ENST00000575515 EHMT2Q96KQ7 1210 aa16.38■□□□□ 0.21
NDC80-204ENST00000575515 SCAF1Q9H7N4 1312 aaKnown RBP16.38■□□□□ 0.21
NDC80-204ENST00000575515 PLA2R1Q13018 1463 aa16.36■□□□□ 0.21
NDC80-204ENST00000575515 SAMD9LQ8IVG5 1584 aa16.35■□□□□ 0.21
NDC80-204ENST00000575515 UBTFP17480 764 aaKnown RBP16.35■□□□□ 0.21
NDC80-204ENST00000575515 ZMYM3Q14202 1370 aa16.35■□□□□ 0.21
NDC80-204ENST00000575515 POLR1AO95602 1720 aaPredicted RBP16.34■□□□□ 0.21
NDC80-204ENST00000575515 PKD2Q13563 968 aa16.34■□□□□ 0.21
NDC80-204ENST00000575515 TCOF1Q13428 1488 aaKnown RBP16.32■□□□□ 0.2
NDC80-204ENST00000575515 SYCP2Q9BX26 1530 aa16.32■□□□□ 0.2
NDC80-204ENST00000575515 PIP4K2BP78356 416 aa16.31■□□□□ 0.2
NDC80-204ENST00000575515 PPP6R1Q9UPN7 881 aa16.31■□□□□ 0.2
NDC80-204ENST00000575515 ATP7AQ04656 1500 aa16.3■□□□□ 0.2
NDC80-204ENST00000575515 CCDC18Q5T9S5 1454 aa16.3■□□□□ 0.2
NDC80-204ENST00000575515 HSPA1LP34931 641 aa16.3■□□□□ 0.2
NDC80-204ENST00000575515 ZNF777Q9ULD5 760 aaPredicted RBP16.29■□□□□ 0.2
NDC80-204ENST00000575515 PLXNC1O60486 1568 aa16.29■□□□□ 0.2
NDC80-204ENST00000575515 SPAG9O60271 1321 aaKnown RBP16.28■□□□□ 0.2
NDC80-204ENST00000575515 PHF23Q9BUL5 403 aaPredicted RBP16.28■□□□□ 0.2
NDC80-204ENST00000575515 INO80Q9ULG1 1556 aaPredicted RBP16.28■□□□□ 0.2
NDC80-204ENST00000575515 PTPRKQ15262 1439 aa16.28■□□□□ 0.2
NDC80-204ENST00000575515 ADGBQ8N7X0 1667 aa16.27■□□□□ 0.19
NDC80-204ENST00000575515 DNMT1P26358 1616 aaKnown RBP16.27■□□□□ 0.19
NDC80-204ENST00000575515 CPS1P31327 1500 aa16.26■□□□□ 0.19
NDC80-204ENST00000575515 A2MP01023 1474 aa16.25■□□□□ 0.19
NDC80-204ENST00000575515 TOM1O60784 492 aa16.25■□□□□ 0.19
NDC80-204ENST00000575515 A2ML1A8K2U0 1454 aa16.24■□□□□ 0.19
NDC80-204ENST00000575515 GGT6Q6P531 493 aa16.24■□□□□ 0.19
NDC80-204ENST00000575515 NEURL4Q96JN8 1562 aa16.22■□□□□ 0.19
NDC80-204ENST00000575515 CASKIN1Q8WXD9 1431 aa16.22■□□□□ 0.19
NDC80-204ENST00000575515 HNRNPMP52272 730 aaKnown RBP eCLIP16.22■□□□□ 0.19
NDC80-204ENST00000575515 SHANK2Q9UPX8 1470 aa16.21■□□□□ 0.19
NDC80-204ENST00000575515 PLEKHH2Q8IVE3 1493 aa16.19■□□□□ 0.18
NDC80-204ENST00000575515 GPATCH8Q9UKJ3 1502 aaKnown RBP16.19■□□□□ 0.18
NDC80-204ENST00000575515 SENP3Q9H4L4 574 aaPredicted RBP16.17■□□□□ 0.18
NDC80-204ENST00000575515 FYCO1Q9BQS8 1478 aa16.16■□□□□ 0.18
NDC80-204ENST00000575515 VWDEQ8N2E2 1590 aa16.16■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms