RNA–Protein interactions for RNA: ENST00000574558.1

MPDU1-212, Transcript of mannose-P-dolichol utilization defect 1, humanhuman

TSL 3

Gene MPDU1, Length 900 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MPDU1-212ENST00000574558 PREX1Q8TCU6 1659 aa16.29■□□□□ 0.2
MPDU1-212ENST00000574558 PLEKHD1A6NEE1 506 aa16.27■□□□□ 0.2
MPDU1-212ENST00000574558 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.26■□□□□ 0.19
MPDU1-212ENST00000574558 ARHGEF12Q9NZN5 1544 aa16.26■□□□□ 0.19
MPDU1-212ENST00000574558 HECW1Q76N89 1606 aa16.26■□□□□ 0.19
MPDU1-212ENST00000574558 CEBPAP49715 358 aaPredicted RBP16.22■□□□□ 0.19
MPDU1-212ENST00000574558 SETD1BQ9UPS6 1966 aaKnown RBP16.22■□□□□ 0.19
MPDU1-212ENST00000574558 ATP10AO60312 1499 aa16.22■□□□□ 0.19
MPDU1-212ENST00000574558 PTPRTO14522 1441 aa16.21■□□□□ 0.19
MPDU1-212ENST00000574558 C9orf84Q5VXU9 1444 aa16.19■□□□□ 0.18
MPDU1-212ENST00000574558 SCAPERQ9BY12 1400 aa16.19■□□□□ 0.18
MPDU1-212ENST00000574558 UHRF1BP1Q6BDS2 1440 aa16.19■□□□□ 0.18
MPDU1-212ENST00000574558 IQSEC2Q5JU85 1478 aa16.17■□□□□ 0.18
MPDU1-212ENST00000574558 LTBP4Q8N2S1 1624 aa16.17■□□□□ 0.18
MPDU1-212ENST00000574558 PLCH2O75038 1416 aa16.16■□□□□ 0.18
MPDU1-212ENST00000574558 CSRNP3Q8WYN3 585 aa16.11■□□□□ 0.17
MPDU1-212ENST00000574558 EFCAB2Q5VUJ9 269 aa16.09■□□□□ 0.17
MPDU1-212ENST00000574558 C3P01024 1663 aa16.08■□□□□ 0.17
MPDU1-212ENST00000574558 RANGAP1P46060 587 aaPredicted RBP16.07■□□□□ 0.16
MPDU1-212ENST00000574558 MYO5CQ9NQX4 1742 aa16.06■□□□□ 0.16
MPDU1-212ENST00000574558 KDM5CP41229 1560 aa16.06■□□□□ 0.16
MPDU1-212ENST00000574558 REREQ9P2R6 1566 aa16.06■□□□□ 0.16
MPDU1-212ENST00000574558 CDK13Q14004 1512 aaKnown RBP16.06■□□□□ 0.16
MPDU1-212ENST00000574558 ZNF518AQ6AHZ1 1483 aa16.06■□□□□ 0.16
MPDU1-212ENST00000574558 NCOA1Q15788 1441 aa16.06■□□□□ 0.16
MPDU1-212ENST00000574558 TRAPPC8Q9Y2L5 1435 aa16.06■□□□□ 0.16
MPDU1-212ENST00000574558 AFAP1Q8N556 730 aa16.04■□□□□ 0.16
MPDU1-212ENST00000574558 DIP2CQ9Y2E4 1556 aa16.04■□□□□ 0.16
MPDU1-212ENST00000574558 AGLP35573 1532 aa16.02■□□□□ 0.15
MPDU1-212ENST00000574558 UBAP1LF5GYI3 381 aa16■□□□□ 0.15
MPDU1-212ENST00000574558 MLH3Q9UHC1 1453 aa15.99■□□□□ 0.15
MPDU1-212ENST00000574558 ABCA6Q8N139 1617 aa15.99■□□□□ 0.15
MPDU1-212ENST00000574558 ESF1Q9H501 851 aaKnown RBP15.99■□□□□ 0.15
MPDU1-212ENST00000574558 CAMSAP1Q5T5Y3 1602 aa15.98■□□□□ 0.15
MPDU1-212ENST00000574558 MYT1LQ9UL68 1186 aa15.98■□□□□ 0.15
MPDU1-212ENST00000574558 CNTLNQ9NXG0 1405 aa15.97■□□□□ 0.15
MPDU1-212ENST00000574558 ZNF335Q9H4Z2 1342 aaPredicted RBP15.96■□□□□ 0.15
MPDU1-212ENST00000574558 ARHGAP5Q13017 1502 aa15.96■□□□□ 0.15
MPDU1-212ENST00000574558 KIF14Q15058 1648 aa15.96■□□□□ 0.15
MPDU1-212ENST00000574558 CDK11AQ9UQ88 783 aaPredicted RBP15.95■□□□□ 0.14
MPDU1-212ENST00000574558 NCKAP5LQ9HCH0 1330 aa15.94■□□□□ 0.14
MPDU1-212ENST00000574558 NPATQ14207 1427 aa15.94■□□□□ 0.14
MPDU1-212ENST00000574558 EEA1Q15075 1411 aa15.94■□□□□ 0.14
MPDU1-212ENST00000574558 MROH2AA6NES4 1674 aa15.92■□□□□ 0.14
MPDU1-212ENST00000574558 CDC42BPBQ9Y5S2 1711 aa15.92■□□□□ 0.14
MPDU1-212ENST00000574558 TROQ12816 1431 aaPredicted RBP15.92■□□□□ 0.14
MPDU1-212ENST00000574558 PKD2Q13563 968 aa15.91■□□□□ 0.14
MPDU1-212ENST00000574558 ATP1B4Q9UN42 357 aaPredicted RBP15.9■□□□□ 0.14
MPDU1-212ENST00000574558 MED1Q15648 1581 aaPredicted RBP15.9■□□□□ 0.14
MPDU1-212ENST00000574558 PLA2R1Q13018 1463 aa15.9■□□□□ 0.14
MPDU1-212ENST00000574558 KIDINS220Q9ULH0 1771 aa15.9■□□□□ 0.14
MPDU1-212ENST00000574558 ZMYM3Q14202 1370 aa15.89■□□□□ 0.13
MPDU1-212ENST00000574558 FMN1Q68DA7 1419 aa15.89■□□□□ 0.13
MPDU1-212ENST00000574558 TCOF1Q13428 1488 aaKnown RBP15.88■□□□□ 0.13
MPDU1-212ENST00000574558 ITSN2Q9NZM3 1697 aa15.88■□□□□ 0.13
MPDU1-212ENST00000574558 ABCC1P33527 1531 aa15.88■□□□□ 0.13
MPDU1-212ENST00000574558 CLIP1P30622 1438 aa15.87■□□□□ 0.13
MPDU1-212ENST00000574558 ZNF142P52746 1687 aaPredicted RBP15.87■□□□□ 0.13
MPDU1-212ENST00000574558 HSPA1LP34931 641 aa15.87■□□□□ 0.13
MPDU1-212ENST00000574558 PREX2Q70Z35 1606 aa15.85■□□□□ 0.13
MPDU1-212ENST00000574558 MYO3AQ8NEV4 1616 aa15.84■□□□□ 0.13
MPDU1-212ENST00000574558 SUPT6HQ7KZ85 1726 aaKnown RBP15.84■□□□□ 0.13
MPDU1-212ENST00000574558 PPP6R1Q9UPN7 881 aa15.83■□□□□ 0.12
MPDU1-212ENST00000574558 CEP170BQ9Y4F5 1589 aaPredicted RBP15.83■□□□□ 0.12
MPDU1-212ENST00000574558 LRRIQ1Q96JM4 1722 aa15.82■□□□□ 0.12
MPDU1-212ENST00000574558 TOM1O60784 492 aa15.81■□□□□ 0.12
MPDU1-212ENST00000574558 PTPRKQ15262 1439 aa15.81■□□□□ 0.12
MPDU1-212ENST00000574558 CLTCQ00610 1675 aaKnown RBP15.8■□□□□ 0.12
MPDU1-212ENST00000574558 ARHGAP35Q9NRY4 1499 aa15.8■□□□□ 0.12
MPDU1-212ENST00000574558 SAMD9LQ8IVG5 1584 aa15.79■□□□□ 0.12
MPDU1-212ENST00000574558 SCAF1Q9H7N4 1312 aaKnown RBP15.79■□□□□ 0.12
MPDU1-212ENST00000574558 PIP4K2BP78356 416 aa15.79■□□□□ 0.12
MPDU1-212ENST00000574558 CPS1P31327 1500 aa15.78■□□□□ 0.12
MPDU1-212ENST00000574558 CDC42BPAQ5VT25 1732 aa15.77■□□□□ 0.11
MPDU1-212ENST00000574558 PHF23Q9BUL5 403 aaPredicted RBP15.76■□□□□ 0.11
MPDU1-212ENST00000574558 SPAG9O60271 1321 aaKnown RBP15.75■□□□□ 0.11
MPDU1-212ENST00000574558 A2ML1A8K2U0 1454 aa15.75■□□□□ 0.11
MPDU1-212ENST00000574558 SHANK2Q9UPX8 1470 aa15.74■□□□□ 0.11
MPDU1-212ENST00000574558 DNMT1P26358 1616 aaKnown RBP15.74■□□□□ 0.11
MPDU1-212ENST00000574558 PLXNC1O60486 1568 aa15.74■□□□□ 0.11
MPDU1-212ENST00000574558 A2MP01023 1474 aa15.72■□□□□ 0.11
MPDU1-212ENST00000574558 POLR1AO95602 1720 aaPredicted RBP15.72■□□□□ 0.11
MPDU1-212ENST00000574558 UBTFP17480 764 aaKnown RBP15.72■□□□□ 0.11
MPDU1-212ENST00000574558 ATP7AQ04656 1500 aa15.72■□□□□ 0.11
MPDU1-212ENST00000574558 NEURL4Q96JN8 1562 aa15.71■□□□□ 0.11
MPDU1-212ENST00000574558 GGT6Q6P531 493 aa15.71■□□□□ 0.11
MPDU1-212ENST00000574558 SYCP2Q9BX26 1530 aa15.71■□□□□ 0.11
MPDU1-212ENST00000574558 ALKQ9UM73 1620 aa15.71■□□□□ 0.11
MPDU1-212ENST00000574558 HNRNPMP52272 730 aaKnown RBP eCLIP15.7■□□□□ 0.1
MPDU1-212ENST00000574558 ZNF777Q9ULD5 760 aaPredicted RBP15.7■□□□□ 0.1
MPDU1-212ENST00000574558 CCDC18Q5T9S5 1454 aa15.7■□□□□ 0.1
MPDU1-212ENST00000574558 INO80Q9ULG1 1556 aaPredicted RBP15.69■□□□□ 0.1
MPDU1-212ENST00000574558 KIAA1107Q9UPP5 1409 aa15.68■□□□□ 0.1
MPDU1-212ENST00000574558 VWDEQ8N2E2 1590 aa15.67■□□□□ 0.1
MPDU1-212ENST00000574558 GPATCH8Q9UKJ3 1502 aaKnown RBP15.67■□□□□ 0.1
MPDU1-212ENST00000574558 CASKIN1Q8WXD9 1431 aa15.67■□□□□ 0.1
MPDU1-212ENST00000574558 ADGBQ8N7X0 1667 aa15.64■□□□□ 0.09
MPDU1-212ENST00000574558 ANKLE2Q86XL3 938 aa15.64■□□□□ 0.09
MPDU1-212ENST00000574558 EHMT2Q96KQ7 1210 aa15.64■□□□□ 0.09
MPDU1-212ENST00000574558 PLEKHH2Q8IVE3 1493 aa15.64■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms