RNA–Protein interactions for RNA: ENST00000573498.5

SRRM2-215, Transcript of serine/arginine repetitive matrix 2, humanhuman

TSL 3

Gene SRRM2, Length 994 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM2-215ENST00000573498 PLCG2P16885 1265 aa12.45□□□□□ -0.42
SRRM2-215ENST00000573498 TMEM106CQ9BVX2 250 aa12.45□□□□□ -0.42
SRRM2-215ENST00000573498 NUBP1P53384 320 aa12.43□□□□□ -0.42
SRRM2-215ENST00000573498 ZBTB47Q9UFB7 747 aaPredicted RBP12.43□□□□□ -0.42
SRRM2-215ENST00000573498 CFTRP13569 1480 aa12.41□□□□□ -0.42
SRRM2-215ENST00000573498 KDM6BO15054 1643 aa12.41□□□□□ -0.42
SRRM2-215ENST00000573498 AQRO60306 1485 aaKnown RBP eCLIP12.4□□□□□ -0.423e-12■■■□□ 16.4
SRRM2-215ENST00000573498 FAM212AQ96EL1 285 aa12.39□□□□□ -0.43
SRRM2-215ENST00000573498 FBXO3Q9UK99 471 aa12.39□□□□□ -0.43
SRRM2-215ENST00000573498 SYNJ1O43426 1573 aa12.39□□□□□ -0.43
SRRM2-215ENST00000573498 SPATA31D1Q6ZQQ2 1576 aa12.36□□□□□ -0.43
SRRM2-215ENST00000573498 IRX5P78411 483 aaPredicted RBP12.36□□□□□ -0.43
SRRM2-215ENST00000573498 FAM69CQ0P6D2 419 aa12.34□□□□□ -0.43
SRRM2-215ENST00000573498 MMRN1Q13201 1228 aa12.32□□□□□ -0.44
SRRM2-215ENST00000573498 TMEM121BQ9BXQ6 578 aaPredicted RBP12.32□□□□□ -0.44
SRRM2-215ENST00000573498 ABCC10Q5T3U5 1492 aa12.32□□□□□ -0.44
SRRM2-215ENST00000573498 OCEL1Q9H607 264 aa12.31□□□□□ -0.44
SRRM2-215ENST00000573498 MROH2BQ7Z745 1585 aa12.3□□□□□ -0.44
SRRM2-215ENST00000573498 SPNS2Q8IVW8 549 aa12.3□□□□□ -0.44
SRRM2-215ENST00000573498 SNPHO15079 494 aa12.29□□□□□ -0.44
SRRM2-215ENST00000573498 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.28□□□□□ -0.44
SRRM2-215ENST00000573498 TOPBP1Q92547 1522 aa12.27□□□□□ -0.44
SRRM2-215ENST00000573498 CHMP7Q8WUX9 453 aaPredicted RBP12.27□□□□□ -0.45
SRRM2-215ENST00000573498 MARVELD3Q96A59 401 aa12.26□□□□□ -0.45
SRRM2-215ENST00000573498 TARBP1Q13395 1621 aaKnown RBP12.26□□□□□ -0.45
SRRM2-215ENST00000573498 PYGBP11216 843 aa12.24□□□□□ -0.45
SRRM2-215ENST00000573498 SNAPC4Q5SXM2 1469 aa12.23□□□□□ -0.45
SRRM2-215ENST00000573498 DCAF8Q5TAQ9 597 aa12.22□□□□□ -0.45
SRRM2-215ENST00000573498 DIP2BQ9P265 1576 aa12.22□□□□□ -0.45
SRRM2-215ENST00000573498 PCDHB8Q9UN66 801 aa12.2□□□□□ -0.46
SRRM2-215ENST00000573498 VASPP50552 380 aaPredicted RBP12.19□□□□□ -0.46
SRRM2-215ENST00000573498 CERKQ8TCT0 537 aa12.18□□□□□ -0.46
SRRM2-215ENST00000573498 MAGI1Q96QZ7 1491 aaPredicted RBP12.18□□□□□ -0.46
SRRM2-215ENST00000573498 ABCC8Q09428 1581 aa12.18□□□□□ -0.46
SRRM2-215ENST00000573498 MAPKBP1O60336 1514 aa12.16□□□□□ -0.46
SRRM2-215ENST00000573498 TSPOAP1O95153 1857 aa12.14□□□□□ -0.47
SRRM2-215ENST00000573498 EMP3P54852 163 aa12.14□□□□□ -0.47
SRRM2-215ENST00000573498 C3orf67Q6ZVT6 689 aa12.14□□□□□ -0.47
SRRM2-215ENST00000573498 TOP2BQ02880 1626 aa12.12□□□□□ -0.47
SRRM2-215ENST00000573498 TDRD9Q8NDG6 1382 aaKnown RBP12.12□□□□□ -0.47
SRRM2-215ENST00000573498 PDCD7Q8N8D1 485 aaKnown RBP12.11□□□□□ -0.47
SRRM2-215ENST00000573498 PRDM2Q13029 1718 aa12.11□□□□□ -0.47
SRRM2-215ENST00000573498 DNMBPQ6XZF7 1577 aa12.1□□□□□ -0.47
SRRM2-215ENST00000573498 GOLGA2Q08379 1002 aa12.09□□□□□ -0.47
SRRM2-215ENST00000573498 POLA1P09884 1462 aaPredicted RBP12.08□□□□□ -0.48
SRRM2-215ENST00000573498 MKRN3Q13064 507 aaKnown RBP12.07□□□□□ -0.48
SRRM2-215ENST00000573498 CEP170Q5SW79 1584 aa12.07□□□□□ -0.48
SRRM2-215ENST00000573498 L3MBTL3Q96JM7 780 aaPredicted RBP12.07□□□□□ -0.48
SRRM2-215ENST00000573498 WDR97A6NE52 1622 aa12.07□□□□□ -0.48
SRRM2-215ENST00000573498 HS3ST6Q96QI5 342 aa12.05□□□□□ -0.48
SRRM2-215ENST00000573498 GRIN2BQ13224 1484 aa12.04□□□□□ -0.48
SRRM2-215ENST00000573498 FAM205CA6NFA0 338 aa12.04□□□□□ -0.48
SRRM2-215ENST00000573498 KRTAP3-3Q9BYR6 98 aa12.04□□□□□ -0.48
SRRM2-215ENST00000573498 KRTAP3-2Q9BYR7 98 aa12.04□□□□□ -0.48
SRRM2-215ENST00000573498 RAD54L2Q9Y4B4 1467 aa12.03□□□□□ -0.48
SRRM2-215ENST00000573498 ZNF467Q7Z7K2 595 aaPredicted RBP12.03□□□□□ -0.48
SRRM2-215ENST00000573498 IFNLR1Q8IU57 520 aaPredicted RBP12.03□□□□□ -0.48
SRRM2-215ENST00000573498 POTEB3A0JP26 581 aa12.02□□□□□ -0.49
SRRM2-215ENST00000573498 POTEBQ6S5H4 581 aa12.02□□□□□ -0.49
SRRM2-215ENST00000573498 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.02□□□□□ -0.493e-15■■□□□ 13.4
SRRM2-215ENST00000573498 WIZO95785 1651 aa12.01□□□□□ -0.49
SRRM2-215ENST00000573498 COL17A1Q9UMD9 1497 aaPredicted RBP12.01□□□□□ -0.49
SRRM2-215ENST00000573498 AMER1Q5JTC6 1135 aaPredicted RBP12□□□□□ -0.49
SRRM2-215ENST00000573498 SOGA1O94964 1423 aa11.99□□□□□ -0.49
SRRM2-215ENST00000573498 PCF11O94913 1555 aaKnown RBP11.99□□□□□ -0.49
SRRM2-215ENST00000573498 SHROOM2Q13796 1616 aa11.98□□□□□ -0.49
SRRM2-215ENST00000573498 GSE1Q14687 1217 aa11.97□□□□□ -0.49
SRRM2-215ENST00000573498 KLHL34Q8N239 644 aa11.97□□□□□ -0.49
SRRM2-215ENST00000573498 PPRC1Q5VV67 1664 aaKnown RBP11.96□□□□□ -0.5
SRRM2-215ENST00000573498 PSEN1P49768 467 aa11.95□□□□□ -0.5
SRRM2-215ENST00000573498 RTN4Q9NQC3 1192 aaKnown RBP11.95□□□□□ -0.5
SRRM2-215ENST00000573498 PTPRMP28827 1452 aa11.92□□□□□ -0.5
SRRM2-215ENST00000573498 NUP160Q12769 1436 aa11.92□□□□□ -0.5
SRRM2-215ENST00000573498 SRCAPQ6ZRS2 3230 aa11.91□□□□□ -0.5
SRRM2-215ENST00000573498 ADCY10Q96PN6 1610 aa11.9□□□□□ -0.5
SRRM2-215ENST00000573498 CHRM1P11229 460 aaPredicted RBP11.89□□□□□ -0.51
SRRM2-215ENST00000573498 DPY19L2Q6NUT2 758 aa11.89□□□□□ -0.51
SRRM2-215ENST00000573498 SPOCK2Q92563 424 aa11.89□□□□□ -0.51
SRRM2-215ENST00000573498 G3V3G9 751 aa11.88□□□□□ -0.51
SRRM2-215ENST00000573498 GRIN2AQ12879 1464 aa11.88□□□□□ -0.51
SRRM2-215ENST00000573498 PRG4Q92954 1404 aaPredicted RBP11.87□□□□□ -0.51
SRRM2-215ENST00000573498 GLI2P10070 1586 aa11.85□□□□□ -0.51
SRRM2-215ENST00000573498 HOXB3P14651 431 aaPredicted RBP11.85□□□□□ -0.51
SRRM2-215ENST00000573498 PDAP1Q13442 181 aaKnown RBP11.84□□□□□ -0.51
SRRM2-215ENST00000573498 ZNF710Q8N1W2 664 aa11.84□□□□□ -0.51
SRRM2-215ENST00000573498 BOLA1Q9Y3E2 137 aa11.84□□□□□ -0.51
SRRM2-215ENST00000573498 PBRM1Q86U86 1689 aa11.84□□□□□ -0.51
SRRM2-215ENST00000573498 HSPA2P54652 639 aa11.83□□□□□ -0.52
SRRM2-215ENST00000573498 CABP2Q9NPB3 220 aa11.82□□□□□ -0.52
SRRM2-215ENST00000573498 ERBB3P21860 1342 aa11.81□□□□□ -0.52
SRRM2-215ENST00000573498 TOP2AP11388 1531 aaKnown RBP11.81□□□□□ -0.52
SRRM2-215ENST00000573498 HOXB1P14653 301 aaPredicted RBP11.8□□□□□ -0.52
SRRM2-215ENST00000573498 ADAMTSL3P82987 1691 aa11.8□□□□□ -0.52
SRRM2-215ENST00000573498 FGD5Q6ZNL6 1462 aa11.79□□□□□ -0.52
SRRM2-215ENST00000573498 TEX14Q8IWB6 1497 aa11.79□□□□□ -0.52
SRRM2-215ENST00000573498 DOK7Q18PE1 504 aa11.78□□□□□ -0.52
SRRM2-215ENST00000573498 JPH4Q96JJ6 628 aa11.78□□□□□ -0.52
SRRM2-215ENST00000573498 RNF166Q96A37 237 aaPredicted RBP11.77□□□□□ -0.53
SRRM2-215ENST00000573498 KIF21BO75037 1637 aa11.76□□□□□ -0.53
SRRM2-215ENST00000573498 PLB1Q6P1J6 1458 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 100 ms