RNA–Protein interactions for RNA: ENST00000569680.1

ARID3B-205, Transcript of AT-rich interaction domain 3B, humanhuman

TSL 1 (best)

Gene ARID3B, Length 2,654 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARID3B-205ENST00000569680 CFDP1Q9UEE9 299 aaPredicted RBP13.97□□□□□ -0.17
ARID3B-205ENST00000569680 UACAQ9BZF9 1416 aa13.96□□□□□ -0.17
ARID3B-205ENST00000569680 SHROOM2Q13796 1616 aa13.95□□□□□ -0.18
ARID3B-205ENST00000569680 TSHZ2Q9NRE2 1034 aa13.95□□□□□ -0.18
ARID3B-205ENST00000569680 AKNAQ7Z591 1439 aa13.95□□□□□ -0.18
ARID3B-205ENST00000569680 GPATCH8Q9UKJ3 1502 aaKnown RBP13.94□□□□□ -0.18
ARID3B-205ENST00000569680 KIF14Q15058 1648 aa13.94□□□□□ -0.18
ARID3B-205ENST00000569680 DAPK1P53355 1430 aa13.94□□□□□ -0.18
ARID3B-205ENST00000569680 ANP32EQ9BTT0 268 aa13.94□□□□□ -0.18
ARID3B-205ENST00000569680 ADCY10Q96PN6 1610 aa13.93□□□□□ -0.18
ARID3B-205ENST00000569680 ABCC5O15440 1437 aa13.93□□□□□ -0.18
ARID3B-205ENST00000569680 OSCARQ8IYS5 282 aa13.93□□□□□ -0.18
ARID3B-205ENST00000569680 TIMELESSQ9UNS1 1208 aa13.92□□□□□ -0.18
ARID3B-205ENST00000569680 ZNF777Q9ULD5 760 aaPredicted RBP13.91□□□□□ -0.18
ARID3B-205ENST00000569680 ROCK1Q13464 1354 aa13.91□□□□□ -0.18
ARID3B-205ENST00000569680 ERCC6L2Q5T890 1561 aa13.9□□□□□ -0.18
ARID3B-205ENST00000569680 CAMSAP2Q08AD1 1489 aa13.9□□□□□ -0.18
ARID3B-205ENST00000569680 DNMT1P26358 1616 aaKnown RBP13.9□□□□□ -0.18
ARID3B-205ENST00000569680 ITSN2Q9NZM3 1697 aa13.9□□□□□ -0.18
ARID3B-205ENST00000569680 GCC2Q8IWJ2 1684 aa13.89□□□□□ -0.19
ARID3B-205ENST00000569680 TRIM52Q96A61 297 aa13.89□□□□□ -0.19
ARID3B-205ENST00000569680 ABCC10Q5T3U5 1492 aa13.88□□□□□ -0.19
ARID3B-205ENST00000569680 CLASP1Q7Z460 1538 aa13.88□□□□□ -0.19
ARID3B-205ENST00000569680 KDM6BO15054 1643 aa13.86□□□□□ -0.19
ARID3B-205ENST00000569680 RIMBP3CA6NJZ7 1639 aa13.84□□□□□ -0.19
ARID3B-205ENST00000569680 RIMBP3BA6NNM3 1639 aa13.84□□□□□ -0.19
ARID3B-205ENST00000569680 RIMBP3Q9UFD9 1639 aa13.84□□□□□ -0.19
ARID3B-205ENST00000569680 MPHOSPH9Q99550 1183 aa13.84□□□□□ -0.19
ARID3B-205ENST00000569680 ABCC2Q92887 1545 aa13.84□□□□□ -0.19
ARID3B-205ENST00000569680 PPP1R15AO75807 674 aaPredicted RBP13.83□□□□□ -0.2
ARID3B-205ENST00000569680 CDC42BPAQ5VT25 1732 aa13.83□□□□□ -0.2
ARID3B-205ENST00000569680 NCOA1Q15788 1441 aa13.83□□□□□ -0.2
ARID3B-205ENST00000569680 TONSLQ96HA7 1378 aa13.82□□□□□ -0.2
ARID3B-205ENST00000569680 DENND4BO75064 1496 aaPredicted RBP13.81□□□□□ -0.2
ARID3B-205ENST00000569680 FOXD1Q16676 465 aa13.81□□□□□ -0.2
ARID3B-205ENST00000569680 HIRIP3Q9BW71 556 aaPredicted RBP13.8□□□□□ -0.2
ARID3B-205ENST00000569680 ANKRD30AQ9BXX3 1397 aa13.79□□□□□ -0.2
ARID3B-205ENST00000569680 ADGRL2O95490 1459 aa13.79□□□□□ -0.2
ARID3B-205ENST00000569680 NCBP3Q53F19 620 aaKnown RBP13.78□□□□□ -0.2
ARID3B-205ENST00000569680 TSPY4P0CV99 314 aa13.78□□□□□ -0.2
ARID3B-205ENST00000569680 TSPY10P0CW01 314 aa13.78□□□□□ -0.2
ARID3B-205ENST00000569680 HNRNPMP52272 730 aaKnown RBP eCLIP13.78□□□□□ -0.2
ARID3B-205ENST00000569680 BCANQ96GW7 911 aa13.77□□□□□ -0.2
ARID3B-205ENST00000569680 UHRF1BP1LA0JNW5 1464 aa13.77□□□□□ -0.2
ARID3B-205ENST00000569680 KCNH8Q96L42 1107 aa13.77□□□□□ -0.21
ARID3B-205ENST00000569680 CROCC2H7BZ55 1655 aa13.76□□□□□ -0.21
ARID3B-205ENST00000569680 SLC4A1APQ9BWU0 796 aaKnown RBP13.76□□□□□ -0.21
ARID3B-205ENST00000569680 C9orf84Q5VXU9 1444 aa13.76□□□□□ -0.21
ARID3B-205ENST00000569680 ADGBQ8N7X0 1667 aa13.75□□□□□ -0.21
ARID3B-205ENST00000569680 SHANK2Q9UPX8 1470 aa13.75□□□□□ -0.21
ARID3B-205ENST00000569680 ERICH6Q7L0X2 663 aa13.75□□□□□ -0.21
ARID3B-205ENST00000569680 MBD5Q9P267 1494 aa13.74□□□□□ -0.21
ARID3B-205ENST00000569680 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.74□□□□□ -0.21
ARID3B-205ENST00000569680 KDM5BQ9UGL1 1544 aa13.74□□□□□ -0.21
ARID3B-205ENST00000569680 RSPH4AQ5TD94 716 aa13.74□□□□□ -0.21
ARID3B-205ENST00000569680 ANKRD50Q9ULJ7 1429 aa13.74□□□□□ -0.21
ARID3B-205ENST00000569680 PREX2Q70Z35 1606 aa13.74□□□□□ -0.21
ARID3B-205ENST00000569680 CDC42BPBQ9Y5S2 1711 aa13.73□□□□□ -0.21
ARID3B-205ENST00000569680 TTC37Q6PGP7 1564 aa13.73□□□□□ -0.21
ARID3B-205ENST00000569680 ANKRD30BQ9BXX2 1392 aa13.72□□□□□ -0.21
ARID3B-205ENST00000569680 ZCCHC11Q5TAX3 1644 aaKnown RBP13.72□□□□□ -0.21
ARID3B-205ENST00000569680 ARHGEF5Q12774 1597 aa13.72□□□□□ -0.21
ARID3B-205ENST00000569680 SAMD9LQ8IVG5 1584 aa13.72□□□□□ -0.21
ARID3B-205ENST00000569680 ARHGAP5Q13017 1502 aa13.72□□□□□ -0.21
ARID3B-205ENST00000569680 PRKCSHP14314 528 aaPredicted RBP13.71□□□□□ -0.21
ARID3B-205ENST00000569680 CCDC141Q6ZP82 1450 aa13.7□□□□□ -0.22
ARID3B-205ENST00000569680 PZPP20742 1482 aa13.7□□□□□ -0.22
ARID3B-205ENST00000569680 KIF15Q9NS87 1388 aa13.69□□□□□ -0.22
ARID3B-205ENST00000569680 PLCH2O75038 1416 aa13.68□□□□□ -0.22
ARID3B-205ENST00000569680 L3MBTL2Q969R5 705 aa13.67□□□□□ -0.22
ARID3B-205ENST00000569680 SYCP2Q9BX26 1530 aa13.67□□□□□ -0.22
ARID3B-205ENST00000569680 KIAA1107Q9UPP5 1409 aa13.67□□□□□ -0.22
ARID3B-205ENST00000569680 MYO5CQ9NQX4 1742 aa13.67□□□□□ -0.22
ARID3B-205ENST00000569680 EFCAB2Q5VUJ9 269 aa13.67□□□□□ -0.22
ARID3B-205ENST00000569680 RPRD2Q5VT52 1461 aaKnown RBP13.66□□□□□ -0.22
ARID3B-205ENST00000569680 NUP155O75694 1391 aa13.66□□□□□ -0.22
ARID3B-205ENST00000569680 PKD2Q13563 968 aa13.66□□□□□ -0.22
ARID3B-205ENST00000569680 PLEKHH2Q8IVE3 1493 aa13.66□□□□□ -0.22
ARID3B-205ENST00000569680 DDX10Q13206 875 aaKnown RBP13.62□□□□□ -0.23
ARID3B-205ENST00000569680 WDR7Q9Y4E6 1490 aa13.62□□□□□ -0.23
ARID3B-205ENST00000569680 ARHGEF12Q9NZN5 1544 aa13.62□□□□□ -0.23
ARID3B-205ENST00000569680 FKBP8Q14318 412 aa13.61□□□□□ -0.23
ARID3B-205ENST00000569680 RTN4Q9NQC3 1192 aaKnown RBP13.61□□□□□ -0.23
ARID3B-205ENST00000569680 MAST1Q9Y2H9 1570 aa13.61□□□□□ -0.23
ARID3B-205ENST00000569680 PLPPR3Q6T4P5 718 aa13.6□□□□□ -0.23
ARID3B-205ENST00000569680 RBM19Q9Y4C8 960 aaKnown RBP13.59□□□□□ -0.23
ARID3B-205ENST00000569680 KDM5DQ9BY66 1539 aa13.59□□□□□ -0.23
ARID3B-205ENST00000569680 TEX14Q8IWB6 1497 aa13.59□□□□□ -0.23
ARID3B-205ENST00000569680 NPM1P06748 294 aaKnown RBP eCLIP13.57□□□□□ -0.24
ARID3B-205ENST00000569680 ASXL2Q76L83 1435 aa13.57□□□□□ -0.24
ARID3B-205ENST00000569680 ABCC1P33527 1531 aa13.57□□□□□ -0.24
ARID3B-205ENST00000569680 ARAP3Q8WWN8 1544 aa13.57□□□□□ -0.24
ARID3B-205ENST00000569680 TRAPPC8Q9Y2L5 1435 aa13.57□□□□□ -0.24
ARID3B-205ENST00000569680 NBPF8Q3BBV2 869 aa13.57□□□□□ -0.24
ARID3B-205ENST00000569680 EIF4G2P78344 907 aaKnown RBP eCLIP13.56□□□□□ -0.24
ARID3B-205ENST00000569680 PLXNC1O60486 1568 aa13.55□□□□□ -0.24
ARID3B-205ENST00000569680 MSH5O43196 834 aa13.55□□□□□ -0.24
ARID3B-205ENST00000569680 HSPA5P11021 654 aaKnown RBP13.55□□□□□ -0.24
ARID3B-205ENST00000569680 AFAP1Q8N556 730 aa13.55□□□□□ -0.24
ARID3B-205ENST00000569680 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms