RNA–Protein interactions for RNA: ENST00000569074.1

CASC17-201, Transcript of cancer susceptibility 17, humanhuman

TSL 1 (best) BASIC

Gene CASC17, Length 2,059 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC17-201ENST00000569074 TIMELESSQ9UNS1 1208 aa8.28□□□□□ -1.08
CASC17-201ENST00000569074 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.27□□□□□ -1.09
CASC17-201ENST00000569074 GTF3C3Q9Y5Q9 886 aa8.27□□□□□ -1.09
CASC17-201ENST00000569074 PPP1R37O75864 691 aa8.25□□□□□ -1.09
CASC17-201ENST00000569074 IFNL1Q8IU54 200 aa8.25□□□□□ -1.09
CASC17-201ENST00000569074 SLAIN1Q8ND83 568 aa8.25□□□□□ -1.09
CASC17-201ENST00000569074 EFCAB3Q8N7B9 438 aa8.24□□□□□ -1.09
CASC17-201ENST00000569074 PLCG2P16885 1265 aa8.23□□□□□ -1.09
CASC17-201ENST00000569074 CABP2Q9NPB3 220 aa8.23□□□□□ -1.09
CASC17-201ENST00000569074 SNPHO15079 494 aa8.22□□□□□ -1.09
CASC17-201ENST00000569074 TMEM132AQ24JP5 1023 aa8.22□□□□□ -1.09
CASC17-201ENST00000569074 TMEM121BQ9BXQ6 578 aaPredicted RBP8.22□□□□□ -1.09
CASC17-201ENST00000569074 ST18O60284 1047 aa8.21□□□□□ -1.1
CASC17-201ENST00000569074 NLRP6P59044 892 aa8.21□□□□□ -1.1
CASC17-201ENST00000569074 FBXO22Q8NEZ5 403 aa8.21□□□□□ -1.1
CASC17-201ENST00000569074 ARHGEF1Q92888 912 aaKnown RBP8.21□□□□□ -1.1
CASC17-201ENST00000569074 PHF8Q9UPP1 1060 aa8.2□□□□□ -1.1
CASC17-201ENST00000569074 E2F4Q16254 413 aa8.2□□□□□ -1.1
CASC17-201ENST00000569074 TMEM106CQ9BVX2 250 aa8.2□□□□□ -1.1
CASC17-201ENST00000569074 SOX12O15370 315 aa8.18□□□□□ -1.1
CASC17-201ENST00000569074 IRX5P78411 483 aaPredicted RBP8.18□□□□□ -1.1
CASC17-201ENST00000569074 SEMA3EO15041 775 aa8.17□□□□□ -1.1
CASC17-201ENST00000569074 MYO15BQ96JP2 1530 aa8.16□□□□□ -1.1
CASC17-201ENST00000569074 OCEL1Q9H607 264 aa8.16□□□□□ -1.1
CASC17-201ENST00000569074 ZEB1P37275 1124 aaPredicted RBP8.15□□□□□ -1.11
CASC17-201ENST00000569074 ZC3H15Q8WU90 426 aaKnown RBP8.14□□□□□ -1.11
CASC17-201ENST00000569074 NCKAP5LQ9HCH0 1330 aa8.14□□□□□ -1.11
CASC17-201ENST00000569074 EIF2AK3Q9NZJ5 1116 aaKnown RBP8.14□□□□□ -1.11
CASC17-201ENST00000569074 ACIN1Q9UKV3 1341 aaKnown RBP8.13□□□□□ -1.11
CASC17-201ENST00000569074 TESPA1A2RU30 521 aaPredicted RBP8.13□□□□□ -1.11
CASC17-201ENST00000569074 BRPF1P55201 1214 aaPredicted RBP8.13□□□□□ -1.11
CASC17-201ENST00000569074 LARP6Q9BRS8 491 aaKnown RBP8.13□□□□□ -1.11
CASC17-201ENST00000569074 DCAF1Q9Y4B6 1507 aa8.11□□□□□ -1.11
CASC17-201ENST00000569074 MMRN1Q13201 1228 aa8.11□□□□□ -1.11
CASC17-201ENST00000569074 ERICH6Q7L0X2 663 aa8.11□□□□□ -1.11
CASC17-201ENST00000569074 SPNS2Q8IVW8 549 aa8.1□□□□□ -1.11
CASC17-201ENST00000569074 MS4A4AQ96JQ5 239 aa8.1□□□□□ -1.11
CASC17-201ENST00000569074 PDE4AP27815 886 aa8.09□□□□□ -1.11
CASC17-201ENST00000569074 GOLGA2Q08379 1002 aa8.09□□□□□ -1.11
CASC17-201ENST00000569074 NEUROD2Q15784 382 aa8.09□□□□□ -1.11
CASC17-201ENST00000569074 SLC24A3Q9HC58 644 aa8.09□□□□□ -1.11
CASC17-201ENST00000569074 CCDC180Q9P1Z9 1646 aa8.08□□□□□ -1.12
CASC17-201ENST00000569074 DDX27Q96GQ7 796 aaKnown RBP8.08□□□□□ -1.12
CASC17-201ENST00000569074 C14orf37Q86TY3 774 aa8.07□□□□□ -1.12
CASC17-201ENST00000569074 CRISPLD2Q9H0B8 497 aa8.07□□□□□ -1.12
CASC17-201ENST00000569074 MFSD10Q14728 455 aa8.06□□□□□ -1.12
CASC17-201ENST00000569074 L3MBTL3Q96JM7 780 aaPredicted RBP8.06□□□□□ -1.12
CASC17-201ENST00000569074 SMYD5Q6GMV2 418 aa8.06□□□□□ -1.12
CASC17-201ENST00000569074 TRIM26Q12899 539 aaPredicted RBP8.05□□□□□ -1.12
CASC17-201ENST00000569074 CENPBP07199 599 aaPredicted RBP8.04□□□□□ -1.12
CASC17-201ENST00000569074 NEUROD1Q13562 356 aa8.04□□□□□ -1.12
CASC17-201ENST00000569074 BCL11AQ9H165 835 aa8.04□□□□□ -1.12
CASC17-201ENST00000569074 ZMYND10O75800 440 aa8.02□□□□□ -1.13
CASC17-201ENST00000569074 MKRN3Q13064 507 aaKnown RBP8.02□□□□□ -1.13
CASC17-201ENST00000569074 ARIH1Q9Y4X5 557 aaPredicted RBP8.01□□□□□ -1.13
CASC17-201ENST00000569074 C3orf67Q6ZVT6 689 aa8.01□□□□□ -1.13
CASC17-201ENST00000569074 CAMK2BQ13554 666 aa8□□□□□ -1.13
CASC17-201ENST00000569074 EMP3P54852 163 aa7.98□□□□□ -1.13
CASC17-201ENST00000569074 PDCD7Q8N8D1 485 aaKnown RBP7.98□□□□□ -1.13
CASC17-201ENST00000569074 MLLT3P42568 568 aaPredicted RBP7.97□□□□□ -1.13
CASC17-201ENST00000569074 RBM26Q5T8P6 1007 aaKnown RBP7.97□□□□□ -1.13
CASC17-201ENST00000569074 MARVELD3Q96A59 401 aa7.97□□□□□ -1.13
CASC17-201ENST00000569074 PPP1R15BQ5SWA1 713 aa7.96□□□□□ -1.13
CASC17-201ENST00000569074 BARGINQ6ZT62 677 aa7.96□□□□□ -1.13
CASC17-201ENST00000569074 ILDR1Q86SU0 546 aaPredicted RBP7.96□□□□□ -1.13
CASC17-201ENST00000569074 GPIHBP1Q8IV16 184 aa7.96□□□□□ -1.14
CASC17-201ENST00000569074 SUPT5HO00267 1087 aaKnown RBP7.95□□□□□ -1.14
CASC17-201ENST00000569074 FAM9AQ8IZU1 332 aaPredicted RBP7.94□□□□□ -1.14
CASC17-201ENST00000569074 ARXQ96QS3 562 aa7.94□□□□□ -1.14
CASC17-201ENST00000569074 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP7.94□□□□□ -1.14
CASC17-201ENST00000569074 GPHNQ9NQX3 736 aaPredicted RBP7.94□□□□□ -1.14
CASC17-201ENST00000569074 KRI1Q8N9T8 703 aaKnown RBP7.93□□□□□ -1.14
CASC17-201ENST00000569074 DPYSL4O14531 572 aa7.93□□□□□ -1.14
CASC17-201ENST00000569074 AK7Q96M32 723 aa7.92□□□□□ -1.14
CASC17-201ENST00000569074 HS3ST6Q96QI5 342 aa7.92□□□□□ -1.14
CASC17-201ENST00000569074 GPBP1L1Q9HC44 474 aaPredicted RBP7.92□□□□□ -1.14
CASC17-201ENST00000569074 EMILIN3Q9NT22 766 aa7.91□□□□□ -1.14
CASC17-201ENST00000569074 KRTAP3-3Q9BYR6 98 aa7.9□□□□□ -1.14
CASC17-201ENST00000569074 KRTAP3-2Q9BYR7 98 aa7.9□□□□□ -1.14
CASC17-201ENST00000569074 DSG2Q14126 1118 aa7.9□□□□□ -1.15
CASC17-201ENST00000569074 FAM205CA6NFA0 338 aa7.88□□□□□ -1.15
CASC17-201ENST00000569074 DPY19L2Q6NUT2 758 aa7.88□□□□□ -1.15
CASC17-201ENST00000569074 PDIA6Q15084 440 aa7.88□□□□□ -1.15
CASC17-201ENST00000569074 G3V3G9 751 aa7.87□□□□□ -1.15
CASC17-201ENST00000569074 MICALL2Q8IY33 904 aa7.87□□□□□ -1.15
CASC17-201ENST00000569074 TMC2Q8TDI7 906 aa7.87□□□□□ -1.15
CASC17-201ENST00000569074 ANP32EQ9BTT0 268 aa7.87□□□□□ -1.15
CASC17-201ENST00000569074 SPDYE16A6NNV3 312 aaPredicted RBP7.86□□□□□ -1.15
CASC17-201ENST00000569074 POTEB3A0JP26 581 aa7.85□□□□□ -1.15
CASC17-201ENST00000569074 POTEBQ6S5H4 581 aa7.85□□□□□ -1.15
CASC17-201ENST00000569074 IL27Q8NEV9 243 aa7.85□□□□□ -1.15
CASC17-201ENST00000569074 KDM4CQ9H3R0 1056 aa7.85□□□□□ -1.15
CASC17-201ENST00000569074 HOXB1P14653 301 aaPredicted RBP7.84□□□□□ -1.15
CASC17-201ENST00000569074 FOXK1P85037 733 aa7.84□□□□□ -1.15
CASC17-201ENST00000569074 TRIM66O15016 1216 aa7.83□□□□□ -1.16
CASC17-201ENST00000569074 DOK7Q18PE1 504 aa7.83□□□□□ -1.16
CASC17-201ENST00000569074 BOLA1Q9Y3E2 137 aa7.83□□□□□ -1.16
CASC17-201ENST00000569074 PDE4DQ08499 809 aa7.83□□□□□ -1.16
CASC17-201ENST00000569074 HOMEZQ8IX15 550 aa7.83□□□□□ -1.16
CASC17-201ENST00000569074 SHROOM4Q9ULL8 1493 aa7.82□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms