RNA–Protein interactions for RNA: ENST00000568676.5

HERPUD1-215, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 571 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-215ENST00000568676 EFCAB2Q5VUJ9 269 aa26.11■■□□□ 1.77
HERPUD1-215ENST00000568676 MYO5CQ9NQX4 1742 aa26.08■■□□□ 1.76
HERPUD1-215ENST00000568676 ATP10AO60312 1499 aa26.07■■□□□ 1.76
HERPUD1-215ENST00000568676 ARHGAP35Q9NRY4 1499 aa26.06■■□□□ 1.76
HERPUD1-215ENST00000568676 ATP1B4Q9UN42 357 aaPredicted RBP26.06■■□□□ 1.76
HERPUD1-215ENST00000568676 C9orf84Q5VXU9 1444 aa26.05■■□□□ 1.76
HERPUD1-215ENST00000568676 SIGLEC1Q9BZZ2 1709 aa26.05■■□□□ 1.76
HERPUD1-215ENST00000568676 KIF14Q15058 1648 aa26.04■■□□□ 1.76
HERPUD1-215ENST00000568676 FER1L4A9Z1Z3 1794 aa26.04■■□□□ 1.76
HERPUD1-215ENST00000568676 ZNF518AQ6AHZ1 1483 aa26.04■■□□□ 1.76
HERPUD1-215ENST00000568676 CLIP1P30622 1438 aa26.03■■□□□ 1.76
HERPUD1-215ENST00000568676 TROQ12816 1431 aaPredicted RBP26.03■■□□□ 1.76
HERPUD1-215ENST00000568676 ARHGEF12Q9NZN5 1544 aa26.02■■□□□ 1.76
HERPUD1-215ENST00000568676 HSPA2P54652 639 aa26■■□□□ 1.75
HERPUD1-215ENST00000568676 MLECQ14165 292 aa26■■□□□ 1.75
HERPUD1-215ENST00000568676 PLPPR3Q6T4P5 718 aa25.97■■□□□ 1.75
HERPUD1-215ENST00000568676 ARHGAP5Q13017 1502 aa25.97■■□□□ 1.75
HERPUD1-215ENST00000568676 KDM5CP41229 1560 aa25.96■■□□□ 1.75
HERPUD1-215ENST00000568676 EHMT2Q96KQ7 1210 aa25.92■■□□□ 1.74
HERPUD1-215ENST00000568676 REREQ9P2R6 1566 aa25.91■■□□□ 1.74
HERPUD1-215ENST00000568676 PREX1Q8TCU6 1659 aa25.91■■□□□ 1.74
HERPUD1-215ENST00000568676 CCDC18Q5T9S5 1454 aa25.9■■□□□ 1.74
HERPUD1-215ENST00000568676 AFAP1Q8N556 730 aa25.89■■□□□ 1.74
HERPUD1-215ENST00000568676 MLH3Q9UHC1 1453 aa25.88■■□□□ 1.73
HERPUD1-215ENST00000568676 CHIC1Q5VXU3 224 aa25.88■■□□□ 1.73
HERPUD1-215ENST00000568676 CERKQ8TCT0 537 aa25.86■■□□□ 1.73
HERPUD1-215ENST00000568676 DIP2CQ9Y2E4 1556 aa25.86■■□□□ 1.73
HERPUD1-215ENST00000568676 MYT1LQ9UL68 1186 aa25.85■■□□□ 1.73
HERPUD1-215ENST00000568676 DMRT2Q9Y5R5 561 aa25.85■■□□□ 1.73
HERPUD1-215ENST00000568676 CASKIN1Q8WXD9 1431 aa25.85■■□□□ 1.73
HERPUD1-215ENST00000568676 LRRIQ1Q96JM4 1722 aa25.85■■□□□ 1.73
HERPUD1-215ENST00000568676 PREX2Q70Z35 1606 aa25.84■■□□□ 1.73
HERPUD1-215ENST00000568676 CDC42BPBQ9Y5S2 1711 aa25.83■■□□□ 1.73
HERPUD1-215ENST00000568676 UHRF1BP1Q6BDS2 1440 aa25.82■■□□□ 1.72
HERPUD1-215ENST00000568676 AGLP35573 1532 aa25.82■■□□□ 1.72
HERPUD1-215ENST00000568676 CEBPAP49715 358 aaPredicted RBP25.81■■□□□ 1.72
HERPUD1-215ENST00000568676 ABCC1P33527 1531 aa25.81■■□□□ 1.72
HERPUD1-215ENST00000568676 SETD1BQ9UPS6 1966 aaKnown RBP25.79■■□□□ 1.72
HERPUD1-215ENST00000568676 ABCA6Q8N139 1617 aa25.78■■□□□ 1.72
HERPUD1-215ENST00000568676 ESF1Q9H501 851 aaKnown RBP25.77■■□□□ 1.72
HERPUD1-215ENST00000568676 ITSN2Q9NZM3 1697 aa25.75■■□□□ 1.71
HERPUD1-215ENST00000568676 TRAPPC8Q9Y2L5 1435 aa25.75■■□□□ 1.71
HERPUD1-215ENST00000568676 FYCO1Q9BQS8 1478 aa25.74■■□□□ 1.71
HERPUD1-215ENST00000568676 CNTLNQ9NXG0 1405 aa25.73■■□□□ 1.71
HERPUD1-215ENST00000568676 STRCQ7RTU9 1775 aa25.7■■□□□ 1.7
HERPUD1-215ENST00000568676 C3P01024 1663 aa25.7■■□□□ 1.7
HERPUD1-215ENST00000568676 CDC42BPAQ5VT25 1732 aa25.69■■□□□ 1.7
HERPUD1-215ENST00000568676 KIDINS220Q9ULH0 1771 aa25.69■■□□□ 1.7
HERPUD1-215ENST00000568676 PTPRTO14522 1441 aa25.68■■□□□ 1.7
HERPUD1-215ENST00000568676 SAMD9LQ8IVG5 1584 aa25.64■■□□□ 1.69
HERPUD1-215ENST00000568676 GPATCH8Q9UKJ3 1502 aaKnown RBP25.62■■□□□ 1.69
HERPUD1-215ENST00000568676 NPATQ14207 1427 aa25.62■■□□□ 1.69
HERPUD1-215ENST00000568676 PLEKHH2Q8IVE3 1493 aa25.61■■□□□ 1.69
HERPUD1-215ENST00000568676 KIAA1107Q9UPP5 1409 aa25.61■■□□□ 1.69
HERPUD1-215ENST00000568676 SPAG9O60271 1321 aaKnown RBP25.61■■□□□ 1.69
HERPUD1-215ENST00000568676 ZNF777Q9ULD5 760 aaPredicted RBP25.6■■□□□ 1.69
HERPUD1-215ENST00000568676 MROH2AA6NES4 1674 aa25.6■■□□□ 1.69
HERPUD1-215ENST00000568676 SYCP2Q9BX26 1530 aa25.59■■□□□ 1.69
HERPUD1-215ENST00000568676 NCOA1Q15788 1441 aa25.55■■□□□ 1.68
HERPUD1-215ENST00000568676 CFDP1Q9UEE9 299 aaPredicted RBP25.55■■□□□ 1.68
HERPUD1-215ENST00000568676 ATP7AQ04656 1500 aa25.54■■□□□ 1.68
HERPUD1-215ENST00000568676 ZMYM3Q14202 1370 aa25.54■■□□□ 1.68
HERPUD1-215ENST00000568676 CCNB3Q8WWL7 1395 aa25.54■■□□□ 1.68
HERPUD1-215ENST00000568676 IQSEC2Q5JU85 1478 aa25.53■■□□□ 1.68
HERPUD1-215ENST00000568676 HNRNPMP52272 730 aaKnown RBP eCLIP25.53■■□□□ 1.68
HERPUD1-215ENST00000568676 PLXNC1O60486 1568 aa25.51■■□□□ 1.67
HERPUD1-215ENST00000568676 INO80Q9ULG1 1556 aaPredicted RBP25.51■■□□□ 1.67
HERPUD1-215ENST00000568676 A2MP01023 1474 aa25.5■■□□□ 1.67
HERPUD1-215ENST00000568676 MTUS2Q5JR59 1369 aa25.5■■□□□ 1.67
HERPUD1-215ENST00000568676 PPP6R1Q9UPN7 881 aa25.5■■□□□ 1.67
HERPUD1-215ENST00000568676 SUPT6HQ7KZ85 1726 aaKnown RBP25.48■■□□□ 1.67
HERPUD1-215ENST00000568676 LTBP4Q8N2S1 1624 aa25.48■■□□□ 1.67
HERPUD1-215ENST00000568676 CAMSAP1Q5T5Y3 1602 aa25.46■■□□□ 1.67
HERPUD1-215ENST00000568676 CLTCQ00610 1675 aaKnown RBP25.42■■□□□ 1.66
HERPUD1-215ENST00000568676 ADGBQ8N7X0 1667 aa25.42■■□□□ 1.66
HERPUD1-215ENST00000568676 PLA2R1Q13018 1463 aa25.42■■□□□ 1.66
HERPUD1-215ENST00000568676 ZNF142P52746 1687 aaPredicted RBP25.42■■□□□ 1.66
HERPUD1-215ENST00000568676 PKD2Q13563 968 aa25.41■■□□□ 1.66
HERPUD1-215ENST00000568676 DISP3Q9P2K9 1392 aa25.41■■□□□ 1.66
HERPUD1-215ENST00000568676 RTEL1-TNFRSF6BF6WH68 1400 aa25.4■■□□□ 1.66
HERPUD1-215ENST00000568676 EHBP1L1Q8N3D4 1523 aa25.4■■□□□ 1.66
HERPUD1-215ENST00000568676 PTPRKQ15262 1439 aa25.39■■□□□ 1.66
HERPUD1-215ENST00000568676 MYO3AQ8NEV4 1616 aa25.39■■□□□ 1.66
HERPUD1-215ENST00000568676 GGT6Q6P531 493 aa25.39■■□□□ 1.66
HERPUD1-215ENST00000568676 TIAM1Q13009 1591 aa25.37■■□□□ 1.65
HERPUD1-215ENST00000568676 CEP170BQ9Y4F5 1589 aaPredicted RBP25.37■■□□□ 1.65
HERPUD1-215ENST00000568676 CEP162Q5TB80 1403 aa25.37■■□□□ 1.65
HERPUD1-215ENST00000568676 MBD5Q9P267 1494 aa25.36■■□□□ 1.65
HERPUD1-215ENST00000568676 TCOF1Q13428 1488 aaKnown RBP25.34■■□□□ 1.65
HERPUD1-215ENST00000568676 NCKAP5LQ9HCH0 1330 aa25.33■■□□□ 1.64
HERPUD1-215ENST00000568676 DHX29Q7Z478 1369 aaKnown RBP25.32■■□□□ 1.64
HERPUD1-215ENST00000568676 FAM135AQ9P2D6 1515 aa25.32■■□□□ 1.64
HERPUD1-215ENST00000568676 RSPH4AQ5TD94 716 aa25.31■■□□□ 1.64
HERPUD1-215ENST00000568676 ZNF644Q9H582 1327 aaPredicted RBP25.31■■□□□ 1.64
HERPUD1-215ENST00000568676 A2ML1A8K2U0 1454 aa25.28■■□□□ 1.64
HERPUD1-215ENST00000568676 ZNF335Q9H4Z2 1342 aaPredicted RBP25.28■■□□□ 1.64
HERPUD1-215ENST00000568676 SPATA31D1Q6ZQQ2 1576 aa25.27■■□□□ 1.64
HERPUD1-215ENST00000568676 CCDC141Q6ZP82 1450 aa25.27■■□□□ 1.64
HERPUD1-215ENST00000568676 SOCS7O14512 581 aa25.25■■□□□ 1.63
HERPUD1-215ENST00000568676 ILDR2Q71H61 639 aa25.24■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 6.9 ms