RNA–Protein interactions for RNA: ENST00000568301.1

COMMD4-223, Transcript of COMM domain containing 4, humanhuman

TSL 5

Gene COMMD4, Length 666 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-223ENST00000568301 PLCH2O75038 1416 aa24.9■■□□□ 1.58
COMMD4-223ENST00000568301 SCAPERQ9BY12 1400 aa24.9■■□□□ 1.58
COMMD4-223ENST00000568301 CHIC1Q5VXU3 224 aa24.9■■□□□ 1.58
COMMD4-223ENST00000568301 FMN1Q68DA7 1419 aa24.89■■□□□ 1.58
COMMD4-223ENST00000568301 EHMT2Q96KQ7 1210 aa24.87■■□□□ 1.57
COMMD4-223ENST00000568301 ATP1B4Q9UN42 357 aaPredicted RBP24.86■■□□□ 1.57
COMMD4-223ENST00000568301 ARHGAP35Q9NRY4 1499 aa24.85■■□□□ 1.57
COMMD4-223ENST00000568301 CDK11AQ9UQ88 783 aaPredicted RBP24.84■■□□□ 1.57
COMMD4-223ENST00000568301 FER1L4A9Z1Z3 1794 aa24.84■■□□□ 1.57
COMMD4-223ENST00000568301 ATP10AO60312 1499 aa24.81■■□□□ 1.56
COMMD4-223ENST00000568301 EFCAB2Q5VUJ9 269 aa24.8■■□□□ 1.56
COMMD4-223ENST00000568301 MYO5CQ9NQX4 1742 aa24.79■■□□□ 1.56
COMMD4-223ENST00000568301 ARHGEF12Q9NZN5 1544 aa24.77■■□□□ 1.56
COMMD4-223ENST00000568301 C9orf84Q5VXU9 1444 aa24.77■■□□□ 1.56
COMMD4-223ENST00000568301 KIF14Q15058 1648 aa24.76■■□□□ 1.55
COMMD4-223ENST00000568301 CEBPAP49715 358 aaPredicted RBP24.74■■□□□ 1.55
COMMD4-223ENST00000568301 CERKQ8TCT0 537 aa24.74■■□□□ 1.55
COMMD4-223ENST00000568301 AFAP1Q8N556 730 aa24.72■■□□□ 1.55
COMMD4-223ENST00000568301 TROQ12816 1431 aaPredicted RBP24.71■■□□□ 1.55
COMMD4-223ENST00000568301 ZNF518AQ6AHZ1 1483 aa24.7■■□□□ 1.54
COMMD4-223ENST00000568301 ARHGAP5Q13017 1502 aa24.69■■□□□ 1.54
COMMD4-223ENST00000568301 PREX1Q8TCU6 1659 aa24.69■■□□□ 1.54
COMMD4-223ENST00000568301 CLIP1P30622 1438 aa24.68■■□□□ 1.54
COMMD4-223ENST00000568301 LRRIQ1Q96JM4 1722 aa24.67■■□□□ 1.54
COMMD4-223ENST00000568301 MYT1LQ9UL68 1186 aa24.66■■□□□ 1.54
COMMD4-223ENST00000568301 KDM5CP41229 1560 aa24.66■■□□□ 1.54
COMMD4-223ENST00000568301 CDC42BPBQ9Y5S2 1711 aa24.62■■□□□ 1.53
COMMD4-223ENST00000568301 DIP2CQ9Y2E4 1556 aa24.62■■□□□ 1.53
COMMD4-223ENST00000568301 CASKIN1Q8WXD9 1431 aa24.61■■□□□ 1.53
COMMD4-223ENST00000568301 STRCQ7RTU9 1775 aa24.61■■□□□ 1.53
COMMD4-223ENST00000568301 CCDC18Q5T9S5 1454 aa24.58■■□□□ 1.53
COMMD4-223ENST00000568301 SETD1BQ9UPS6 1966 aaKnown RBP24.58■■□□□ 1.53
COMMD4-223ENST00000568301 ABCA6Q8N139 1617 aa24.57■■□□□ 1.52
COMMD4-223ENST00000568301 UHRF1BP1Q6BDS2 1440 aa24.57■■□□□ 1.52
COMMD4-223ENST00000568301 REREQ9P2R6 1566 aa24.57■■□□□ 1.52
COMMD4-223ENST00000568301 MLH3Q9UHC1 1453 aa24.57■■□□□ 1.52
COMMD4-223ENST00000568301 TRAPPC8Q9Y2L5 1435 aa24.56■■□□□ 1.52
COMMD4-223ENST00000568301 DMRT2Q9Y5R5 561 aa24.56■■□□□ 1.52
COMMD4-223ENST00000568301 PREX2Q70Z35 1606 aa24.53■■□□□ 1.52
COMMD4-223ENST00000568301 C3P01024 1663 aa24.53■■□□□ 1.52
COMMD4-223ENST00000568301 ABCC1P33527 1531 aa24.53■■□□□ 1.52
COMMD4-223ENST00000568301 AGLP35573 1532 aa24.51■■□□□ 1.51
COMMD4-223ENST00000568301 ITSN2Q9NZM3 1697 aa24.5■■□□□ 1.51
COMMD4-223ENST00000568301 ESF1Q9H501 851 aaKnown RBP24.49■■□□□ 1.51
COMMD4-223ENST00000568301 FYCO1Q9BQS8 1478 aa24.49■■□□□ 1.51
COMMD4-223ENST00000568301 KIDINS220Q9ULH0 1771 aa24.48■■□□□ 1.51
COMMD4-223ENST00000568301 CDC42BPAQ5VT25 1732 aa24.47■■□□□ 1.51
COMMD4-223ENST00000568301 PTPRTO14522 1441 aa24.44■■□□□ 1.5
COMMD4-223ENST00000568301 ZNF777Q9ULD5 760 aaPredicted RBP24.41■■□□□ 1.5
COMMD4-223ENST00000568301 SAMD9LQ8IVG5 1584 aa24.39■■□□□ 1.5
COMMD4-223ENST00000568301 CNTLNQ9NXG0 1405 aa24.39■■□□□ 1.5
COMMD4-223ENST00000568301 DISP3Q9P2K9 1392 aa24.38■■□□□ 1.49
COMMD4-223ENST00000568301 GPATCH8Q9UKJ3 1502 aaKnown RBP24.37■■□□□ 1.49
COMMD4-223ENST00000568301 HNRNPMP52272 730 aaKnown RBP eCLIP24.36■■□□□ 1.49
COMMD4-223ENST00000568301 ILDR2Q71H61 639 aa24.36■■□□□ 1.49
COMMD4-223ENST00000568301 NCOA1Q15788 1441 aa24.35■■□□□ 1.49
COMMD4-223ENST00000568301 LTBP4Q8N2S1 1624 aa24.35■■□□□ 1.49
COMMD4-223ENST00000568301 SYCP2Q9BX26 1530 aa24.35■■□□□ 1.49
COMMD4-223ENST00000568301 SPAG9O60271 1321 aaKnown RBP24.35■■□□□ 1.49
COMMD4-223ENST00000568301 ZMYM3Q14202 1370 aa24.33■■□□□ 1.49
COMMD4-223ENST00000568301 SUPT6HQ7KZ85 1726 aaKnown RBP24.32■■□□□ 1.48
COMMD4-223ENST00000568301 MROH2AA6NES4 1674 aa24.31■■□□□ 1.48
COMMD4-223ENST00000568301 NPATQ14207 1427 aa24.31■■□□□ 1.48
COMMD4-223ENST00000568301 KIAA1107Q9UPP5 1409 aa24.31■■□□□ 1.48
COMMD4-223ENST00000568301 CFDP1Q9UEE9 299 aaPredicted RBP24.3■■□□□ 1.48
COMMD4-223ENST00000568301 CAMSAP1Q5T5Y3 1602 aa24.3■■□□□ 1.48
COMMD4-223ENST00000568301 PLEKHH2Q8IVE3 1493 aa24.29■■□□□ 1.48
COMMD4-223ENST00000568301 CCNB3Q8WWL7 1395 aa24.28■■□□□ 1.48
COMMD4-223ENST00000568301 ATP7AQ04656 1500 aa24.27■■□□□ 1.48
COMMD4-223ENST00000568301 MTUS2Q5JR59 1369 aa24.27■■□□□ 1.48
COMMD4-223ENST00000568301 CLTCQ00610 1675 aaKnown RBP24.26■■□□□ 1.47
COMMD4-223ENST00000568301 NCKAP5LQ9HCH0 1330 aa24.26■■□□□ 1.47
COMMD4-223ENST00000568301 A2MP01023 1474 aa24.24■■□□□ 1.47
COMMD4-223ENST00000568301 IQSEC2Q5JU85 1478 aa24.24■■□□□ 1.47
COMMD4-223ENST00000568301 PLXNC1O60486 1568 aa24.24■■□□□ 1.47
COMMD4-223ENST00000568301 INO80Q9ULG1 1556 aaPredicted RBP24.24■■□□□ 1.47
COMMD4-223ENST00000568301 SOCS7O14512 581 aa24.22■■□□□ 1.47
COMMD4-223ENST00000568301 GGT6Q6P531 493 aa24.22■■□□□ 1.47
COMMD4-223ENST00000568301 ZNF335Q9H4Z2 1342 aaPredicted RBP24.2■■□□□ 1.46
COMMD4-223ENST00000568301 SPATA31D1Q6ZQQ2 1576 aa24.2■■□□□ 1.46
COMMD4-223ENST00000568301 PTPRKQ15262 1439 aa24.19■■□□□ 1.46
COMMD4-223ENST00000568301 MYO3AQ8NEV4 1616 aa24.19■■□□□ 1.46
COMMD4-223ENST00000568301 ZNF644Q9H582 1327 aaPredicted RBP24.17■■□□□ 1.46
COMMD4-223ENST00000568301 ZNF142P52746 1687 aaPredicted RBP24.17■■□□□ 1.46
COMMD4-223ENST00000568301 PKD2Q13563 968 aa24.16■■□□□ 1.46
COMMD4-223ENST00000568301 CEP170BQ9Y4F5 1589 aaPredicted RBP24.16■■□□□ 1.46
COMMD4-223ENST00000568301 EHBP1L1Q8N3D4 1523 aa24.15■■□□□ 1.46
COMMD4-223ENST00000568301 PLA2R1Q13018 1463 aa24.14■■□□□ 1.46
COMMD4-223ENST00000568301 TIAM1Q13009 1591 aa24.14■■□□□ 1.45
COMMD4-223ENST00000568301 CEP162Q5TB80 1403 aa24.13■■□□□ 1.45
COMMD4-223ENST00000568301 PPP6R1Q9UPN7 881 aa24.13■■□□□ 1.45
COMMD4-223ENST00000568301 ADGBQ8N7X0 1667 aa24.13■■□□□ 1.45
COMMD4-223ENST00000568301 TCOF1Q13428 1488 aaKnown RBP24.13■■□□□ 1.45
COMMD4-223ENST00000568301 MBD5Q9P267 1494 aa24.12■■□□□ 1.45
COMMD4-223ENST00000568301 UBAP1LF5GYI3 381 aa24.11■■□□□ 1.45
COMMD4-223ENST00000568301 RTEL1-TNFRSF6BF6WH68 1400 aa24.1■■□□□ 1.45
COMMD4-223ENST00000568301 DHX29Q7Z478 1369 aaKnown RBP24.05■■□□□ 1.44
COMMD4-223ENST00000568301 RSPH4AQ5TD94 716 aa24.05■■□□□ 1.44
COMMD4-223ENST00000568301 DNMT1P26358 1616 aaKnown RBP24.05■■□□□ 1.44
COMMD4-223ENST00000568301 A2ML1A8K2U0 1454 aa24.05■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms