RNA–Protein interactions for RNA: ENST00000567883.5

FANCA-227, Transcript of FA complementation group A, humanhuman

TSL 2

Gene FANCA, Length 650 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FANCA-227ENST00000567883 MYO5CQ9NQX4 1742 aa18.4■□□□□ 0.54
FANCA-227ENST00000567883 EFCAB2Q5VUJ9 269 aa18.4■□□□□ 0.54
FANCA-227ENST00000567883 CDK11AQ9UQ88 783 aaPredicted RBP18.4■□□□□ 0.54
FANCA-227ENST00000567883 FER1L4A9Z1Z3 1794 aa18.4■□□□□ 0.54
FANCA-227ENST00000567883 ATP10AO60312 1499 aa18.39■□□□□ 0.53
FANCA-227ENST00000567883 UBTFP17480 764 aaKnown RBP18.38■□□□□ 0.53
FANCA-227ENST00000567883 ARHGAP35Q9NRY4 1499 aa18.38■□□□□ 0.53
FANCA-227ENST00000567883 HSPA2P54652 639 aa18.37■□□□□ 0.53
FANCA-227ENST00000567883 MLECQ14165 292 aa18.36■□□□□ 0.53
FANCA-227ENST00000567883 ATP1B4Q9UN42 357 aaPredicted RBP18.36■□□□□ 0.53
FANCA-227ENST00000567883 ARHGEF12Q9NZN5 1544 aa18.35■□□□□ 0.53
FANCA-227ENST00000567883 C9orf84Q5VXU9 1444 aa18.35■□□□□ 0.53
FANCA-227ENST00000567883 KIF14Q15058 1648 aa18.34■□□□□ 0.53
FANCA-227ENST00000567883 TROQ12816 1431 aaPredicted RBP18.33■□□□□ 0.53
FANCA-227ENST00000567883 PLPPR3Q6T4P5 718 aa18.33■□□□□ 0.52
FANCA-227ENST00000567883 ZNF518AQ6AHZ1 1483 aa18.33■□□□□ 0.52
FANCA-227ENST00000567883 KDM5CP41229 1560 aa18.3■□□□□ 0.52
FANCA-227ENST00000567883 CLIP1P30622 1438 aa18.3■□□□□ 0.52
FANCA-227ENST00000567883 LRRIQ1Q96JM4 1722 aa18.29■□□□□ 0.52
FANCA-227ENST00000567883 ARHGAP5Q13017 1502 aa18.29■□□□□ 0.52
FANCA-227ENST00000567883 PREX1Q8TCU6 1659 aa18.29■□□□□ 0.52
FANCA-227ENST00000567883 EHMT2Q96KQ7 1210 aa18.29■□□□□ 0.52
FANCA-227ENST00000567883 SETD1BQ9UPS6 1966 aaKnown RBP18.28■□□□□ 0.52
FANCA-227ENST00000567883 CDC42BPBQ9Y5S2 1711 aa18.27■□□□□ 0.52
FANCA-227ENST00000567883 AFAP1Q8N556 730 aa18.27■□□□□ 0.52
FANCA-227ENST00000567883 REREQ9P2R6 1566 aa18.26■□□□□ 0.51
FANCA-227ENST00000567883 CERKQ8TCT0 537 aa18.26■□□□□ 0.51
FANCA-227ENST00000567883 MLH3Q9UHC1 1453 aa18.24■□□□□ 0.51
FANCA-227ENST00000567883 DIP2CQ9Y2E4 1556 aa18.24■□□□□ 0.51
FANCA-227ENST00000567883 CEBPAP49715 358 aaPredicted RBP18.23■□□□□ 0.51
FANCA-227ENST00000567883 PREX2Q70Z35 1606 aa18.22■□□□□ 0.51
FANCA-227ENST00000567883 CCDC18Q5T9S5 1454 aa18.21■□□□□ 0.51
FANCA-227ENST00000567883 CASKIN1Q8WXD9 1431 aa18.21■□□□□ 0.51
FANCA-227ENST00000567883 MYT1LQ9UL68 1186 aa18.2■□□□□ 0.5
FANCA-227ENST00000567883 DMRT2Q9Y5R5 561 aa18.2■□□□□ 0.5
FANCA-227ENST00000567883 ABCA6Q8N139 1617 aa18.2■□□□□ 0.5
FANCA-227ENST00000567883 STRCQ7RTU9 1775 aa18.19■□□□□ 0.5
FANCA-227ENST00000567883 AGLP35573 1532 aa18.19■□□□□ 0.5
FANCA-227ENST00000567883 UHRF1BP1Q6BDS2 1440 aa18.19■□□□□ 0.5
FANCA-227ENST00000567883 ABCC1P33527 1531 aa18.18■□□□□ 0.5
FANCA-227ENST00000567883 ITSN2Q9NZM3 1697 aa18.18■□□□□ 0.5
FANCA-227ENST00000567883 TRAPPC8Q9Y2L5 1435 aa18.17■□□□□ 0.5
FANCA-227ENST00000567883 C3P01024 1663 aa18.16■□□□□ 0.5
FANCA-227ENST00000567883 CDC42BPAQ5VT25 1732 aa18.16■□□□□ 0.5
FANCA-227ENST00000567883 KIDINS220Q9ULH0 1771 aa18.15■□□□□ 0.5
FANCA-227ENST00000567883 ESF1Q9H501 851 aaKnown RBP18.13■□□□□ 0.49
FANCA-227ENST00000567883 FYCO1Q9BQS8 1478 aa18.12■□□□□ 0.49
FANCA-227ENST00000567883 PTPRTO14522 1441 aa18.11■□□□□ 0.49
FANCA-227ENST00000567883 CNTLNQ9NXG0 1405 aa18.11■□□□□ 0.49
FANCA-227ENST00000567883 SAMD9LQ8IVG5 1584 aa18.08■□□□□ 0.49
FANCA-227ENST00000567883 GPATCH8Q9UKJ3 1502 aaKnown RBP18.07■□□□□ 0.48
FANCA-227ENST00000567883 MROH2AA6NES4 1674 aa18.06■□□□□ 0.48
FANCA-227ENST00000567883 ZNF777Q9ULD5 760 aaPredicted RBP18.04■□□□□ 0.48
FANCA-227ENST00000567883 NPATQ14207 1427 aa18.04■□□□□ 0.48
FANCA-227ENST00000567883 KIAA1107Q9UPP5 1409 aa18.04■□□□□ 0.48
FANCA-227ENST00000567883 SYCP2Q9BX26 1530 aa18.03■□□□□ 0.48
FANCA-227ENST00000567883 SPAG9O60271 1321 aaKnown RBP18.03■□□□□ 0.48
FANCA-227ENST00000567883 NCOA1Q15788 1441 aa18.02■□□□□ 0.48
FANCA-227ENST00000567883 PLEKHH2Q8IVE3 1493 aa18.01■□□□□ 0.47
FANCA-227ENST00000567883 HNRNPMP52272 730 aaKnown RBP eCLIP18.01■□□□□ 0.47
FANCA-227ENST00000567883 ZMYM3Q14202 1370 aa18.01■□□□□ 0.47
FANCA-227ENST00000567883 LTBP4Q8N2S1 1624 aa18.01■□□□□ 0.47
FANCA-227ENST00000567883 SUPT6HQ7KZ85 1726 aaKnown RBP18.01■□□□□ 0.47
FANCA-227ENST00000567883 ATP7AQ04656 1500 aa18■□□□□ 0.47
FANCA-227ENST00000567883 CFDP1Q9UEE9 299 aaPredicted RBP17.99■□□□□ 0.47
FANCA-227ENST00000567883 IQSEC2Q5JU85 1478 aa17.99■□□□□ 0.47
FANCA-227ENST00000567883 PLXNC1O60486 1568 aa17.99■□□□□ 0.47
FANCA-227ENST00000567883 INO80Q9ULG1 1556 aaPredicted RBP17.99■□□□□ 0.47
FANCA-227ENST00000567883 CCNB3Q8WWL7 1395 aa17.97■□□□□ 0.47
FANCA-227ENST00000567883 CAMSAP1Q5T5Y3 1602 aa17.97■□□□□ 0.47
FANCA-227ENST00000567883 A2MP01023 1474 aa17.96■□□□□ 0.47
FANCA-227ENST00000567883 CLTCQ00610 1675 aaKnown RBP17.96■□□□□ 0.47
FANCA-227ENST00000567883 PPP6R1Q9UPN7 881 aa17.95■□□□□ 0.46
FANCA-227ENST00000567883 ZNF142P52746 1687 aaPredicted RBP17.93■□□□□ 0.46
FANCA-227ENST00000567883 MTUS2Q5JR59 1369 aa17.93■□□□□ 0.46
FANCA-227ENST00000567883 ADGBQ8N7X0 1667 aa17.93■□□□□ 0.46
FANCA-227ENST00000567883 DISP3Q9P2K9 1392 aa17.92■□□□□ 0.46
FANCA-227ENST00000567883 PTPRKQ15262 1439 aa17.92■□□□□ 0.46
FANCA-227ENST00000567883 PLA2R1Q13018 1463 aa17.91■□□□□ 0.46
FANCA-227ENST00000567883 MYO3AQ8NEV4 1616 aa17.9■□□□□ 0.46
FANCA-227ENST00000567883 PKD2Q13563 968 aa17.9■□□□□ 0.46
FANCA-227ENST00000567883 GGT6Q6P531 493 aa17.9■□□□□ 0.46
FANCA-227ENST00000567883 CEP170BQ9Y4F5 1589 aaPredicted RBP17.89■□□□□ 0.45
FANCA-227ENST00000567883 NCKAP5LQ9HCH0 1330 aa17.89■□□□□ 0.45
FANCA-227ENST00000567883 RTEL1-TNFRSF6BF6WH68 1400 aa17.89■□□□□ 0.45
FANCA-227ENST00000567883 MBD5Q9P267 1494 aa17.88■□□□□ 0.45
FANCA-227ENST00000567883 TIAM1Q13009 1591 aa17.88■□□□□ 0.45
FANCA-227ENST00000567883 TCOF1Q13428 1488 aaKnown RBP17.88■□□□□ 0.45
FANCA-227ENST00000567883 EHBP1L1Q8N3D4 1523 aa17.88■□□□□ 0.45
FANCA-227ENST00000567883 ILDR2Q71H61 639 aa17.87■□□□□ 0.45
FANCA-227ENST00000567883 ZNF644Q9H582 1327 aaPredicted RBP17.87■□□□□ 0.45
FANCA-227ENST00000567883 CEP162Q5TB80 1403 aa17.86■□□□□ 0.45
FANCA-227ENST00000567883 DHX29Q7Z478 1369 aaKnown RBP17.85■□□□□ 0.45
FANCA-227ENST00000567883 ZNF335Q9H4Z2 1342 aaPredicted RBP17.84■□□□□ 0.45
FANCA-227ENST00000567883 SPATA31D1Q6ZQQ2 1576 aa17.83■□□□□ 0.45
FANCA-227ENST00000567883 SOCS7O14512 581 aa17.83■□□□□ 0.44
FANCA-227ENST00000567883 A2ML1A8K2U0 1454 aa17.82■□□□□ 0.44
FANCA-227ENST00000567883 DNMT1P26358 1616 aaKnown RBP17.81■□□□□ 0.44
FANCA-227ENST00000567883 RSPH4AQ5TD94 716 aa17.8■□□□□ 0.44
FANCA-227ENST00000567883 FAM135AQ9P2D6 1515 aa17.8■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms