RNA–Protein interactions for RNA: ENST00000567006.1

ACSM3-210, Transcript of acyl-CoA synthetase medium chain family member 3, humanhuman

TSL 2

Gene ACSM3, Length 520 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACSM3-210ENST00000567006 FAM205CA6NFA0 338 aa13.37□□□□□ -0.27
ACSM3-210ENST00000567006 HS3ST6Q96QI5 342 aa13.36□□□□□ -0.27
ACSM3-210ENST00000567006 ZSWIM6Q9HCJ5 1215 aa13.35□□□□□ -0.27
ACSM3-210ENST00000567006 HS6ST3Q8IZP7 471 aa13.33□□□□□ -0.28
ACSM3-210ENST00000567006 POTEB3A0JP26 581 aa13.28□□□□□ -0.28
ACSM3-210ENST00000567006 CHGAP10645 457 aaKnown RBP13.28□□□□□ -0.28
ACSM3-210ENST00000567006 POTEBQ6S5H4 581 aa13.28□□□□□ -0.28
ACSM3-210ENST00000567006 ERBB3P21860 1342 aa13.28□□□□□ -0.28
ACSM3-210ENST00000567006 C2orf72A6NCS6 295 aa13.25□□□□□ -0.29
ACSM3-210ENST00000567006 KIF3CO14782 793 aa13.25□□□□□ -0.29
ACSM3-210ENST00000567006 PPP1R37O75864 691 aa13.24□□□□□ -0.29
ACSM3-210ENST00000567006 GPR153Q6NV75 609 aa13.24□□□□□ -0.29
ACSM3-210ENST00000567006 TMC2Q8TDI7 906 aa13.24□□□□□ -0.29
ACSM3-210ENST00000567006 SPNS2Q8IVW8 549 aa13.23□□□□□ -0.29
ACSM3-210ENST00000567006 ARSIQ5FYB1 569 aa13.19□□□□□ -0.3
ACSM3-210ENST00000567006 VARS2Q5ST30 1063 aaKnown RBP13.19□□□□□ -0.3
ACSM3-210ENST00000567006 KRTAP3-3Q9BYR6 98 aa13.19□□□□□ -0.3
ACSM3-210ENST00000567006 KRTAP3-2Q9BYR7 98 aa13.19□□□□□ -0.3
ACSM3-210ENST00000567006 DNAJC5Q9H3Z4 198 aa13.18□□□□□ -0.3
ACSM3-210ENST00000567006 RYDENQ9NUL5 291 aaKnown RBP13.17□□□□□ -0.3
ACSM3-210ENST00000567006 MMRN1Q13201 1228 aa13.16□□□□□ -0.3
ACSM3-210ENST00000567006 SLC34A2O95436 690 aa13.13□□□□□ -0.31
ACSM3-210ENST00000567006 ZNF687Q8N1G0 1237 aa13.11□□□□□ -0.31
ACSM3-210ENST00000567006 NKX1-1Q15270 411 aaPredicted RBP13.1□□□□□ -0.31
ACSM3-210ENST00000567006 KHSRPQ92945 711 aaKnown RBP eCLIP13.1□□□□□ -0.31
ACSM3-210ENST00000567006 ZNF316A6NFI3 1004 aaPredicted RBP13.09□□□□□ -0.31
ACSM3-210ENST00000567006 PCDHGA4Q9Y5G9 962 aa13.08□□□□□ -0.32
ACSM3-210ENST00000567006 GPHNQ9NQX3 736 aaPredicted RBP13.06□□□□□ -0.32
ACSM3-210ENST00000567006 NUDT7P0C024 238 aa13.05□□□□□ -0.32
ACSM3-210ENST00000567006 FOXK1P85037 733 aa13.05□□□□□ -0.32
ACSM3-210ENST00000567006 DCAF8L2P0C7V8 631 aa13.04□□□□□ -0.32
ACSM3-210ENST00000567006 PLPP6Q8IY26 295 aa13.01□□□□□ -0.33
ACSM3-210ENST00000567006 PTCD2Q8WV60 388 aaKnown RBP12.99□□□□□ -0.33
ACSM3-210ENST00000567006 LHX6Q9UPM6 363 aa12.98□□□□□ -0.33
ACSM3-210ENST00000567006 DSG2Q14126 1118 aa12.97□□□□□ -0.33
ACSM3-210ENST00000567006 TBC1D12O60347 775 aa12.96□□□□□ -0.33
ACSM3-210ENST00000567006 GTPBP6O43824 516 aaPredicted RBP12.94□□□□□ -0.34
ACSM3-210ENST00000567006 PSDA5PKW4 1024 aaPredicted RBP12.93□□□□□ -0.34
ACSM3-210ENST00000567006 PBX2P40425 430 aa12.93□□□□□ -0.34
ACSM3-210ENST00000567006 PTGER2P43116 358 aa12.91□□□□□ -0.34
ACSM3-210ENST00000567006 ANKRD13DQ6ZTN6 518 aa12.91□□□□□ -0.34
ACSM3-210ENST00000567006 CRISPLD2Q9H0B8 497 aa12.91□□□□□ -0.34
ACSM3-210ENST00000567006 PDE4AP27815 886 aa12.9□□□□□ -0.34
ACSM3-210ENST00000567006 LSM11P83369 360 aaKnown RBP eCLIP12.89□□□□□ -0.35
ACSM3-210ENST00000567006 KDM4FA0A1W2PPD8 638 aa12.88□□□□□ -0.35
ACSM3-210ENST00000567006 MYT1LQ9UL68 1186 aa12.88□□□□□ -0.35
ACSM3-210ENST00000567006 PPP1R15BQ5SWA1 713 aa12.87□□□□□ -0.35
ACSM3-210ENST00000567006 RNF166Q96A37 237 aaPredicted RBP12.87□□□□□ -0.35
ACSM3-210ENST00000567006 NCKAP5LQ9HCH0 1330 aa12.84□□□□□ -0.35
ACSM3-210ENST00000567006 OXER1Q8TDS5 423 aa12.83□□□□□ -0.36
ACSM3-210ENST00000567006 AXIN2Q9Y2T1 843 aa12.82□□□□□ -0.36
ACSM3-210ENST00000567006 ARHGAP33O14559 1287 aa12.81□□□□□ -0.36
ACSM3-210ENST00000567006 PPP4R3BQ5MIZ7 849 aa12.81□□□□□ -0.36
ACSM3-210ENST00000567006 POTEEQ6S8J3 1075 aa12.81□□□□□ -0.36
ACSM3-210ENST00000567006 UPF1Q92900 1129 aaKnown RBP eCLIP12.81□□□□□ -0.36
ACSM3-210ENST00000567006 LARP6Q9BRS8 491 aaKnown RBP12.8□□□□□ -0.36
ACSM3-210ENST00000567006 DDX27Q96GQ7 796 aaKnown RBP12.79□□□□□ -0.36
ACSM3-210ENST00000567006 AMER1Q5JTC6 1135 aaPredicted RBP12.75□□□□□ -0.37
ACSM3-210ENST00000567006 BBXQ8WY36 941 aaPredicted RBP12.74□□□□□ -0.37
ACSM3-210ENST00000567006 MFSD10Q14728 455 aa12.73□□□□□ -0.37
ACSM3-210ENST00000567006 KCNH8Q96L42 1107 aa12.73□□□□□ -0.37
ACSM3-210ENST00000567006 ADGRD1Q6QNK2 874 aa12.71□□□□□ -0.37
ACSM3-210ENST00000567006 TK2O00142 265 aa12.7□□□□□ -0.38
ACSM3-210ENST00000567006 PSEN2P49810 448 aa12.69□□□□□ -0.38
ACSM3-210ENST00000567006 ZNF454Q8N9F8 522 aa12.69□□□□□ -0.38
ACSM3-210ENST00000567006 MAP3K9P80192 1104 aa12.68□□□□□ -0.38
ACSM3-210ENST00000567006 ANO8Q9HCE9 1232 aaPredicted RBP12.68□□□□□ -0.38
ACSM3-210ENST00000567006 EVI5O60447 810 aa12.67□□□□□ -0.38
ACSM3-210ENST00000567006 DMRTA1Q5VZB9 504 aa12.67□□□□□ -0.38
ACSM3-210ENST00000567006 CADPS2Q86UW7 1296 aa12.67□□□□□ -0.38
ACSM3-210ENST00000567006 KCNK17Q96T54 332 aa12.66□□□□□ -0.38
ACSM3-210ENST00000567006 FOSBP53539 338 aa12.64□□□□□ -0.39
ACSM3-210ENST00000567006 BCL2L12Q9HB09 334 aa12.63□□□□□ -0.39
ACSM3-210ENST00000567006 JPH4Q96JJ6 628 aa12.62□□□□□ -0.39
ACSM3-210ENST00000567006 STAC3Q96MF2 364 aa12.62□□□□□ -0.39
ACSM3-210ENST00000567006 EMILIN3Q9NT22 766 aa12.62□□□□□ -0.39
ACSM3-210ENST00000567006 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.62□□□□□ -0.39
ACSM3-210ENST00000567006 HRO43593 1189 aa12.6□□□□□ -0.39
ACSM3-210ENST00000567006 SPRYD3Q8NCJ5 442 aa12.6□□□□□ -0.39
ACSM3-210ENST00000567006 RTN4Q9NQC3 1192 aaKnown RBP12.6□□□□□ -0.39
ACSM3-210ENST00000567006 PTPREP23469 700 aa12.59□□□□□ -0.39
ACSM3-210ENST00000567006 ZDHHC16Q969W1 377 aa12.58□□□□□ -0.4
ACSM3-210ENST00000567006 HCSTQ9UBK5 93 aa12.56□□□□□ -0.4
ACSM3-210ENST00000567006 VPS9D1Q9Y2B5 631 aa12.56□□□□□ -0.4
ACSM3-210ENST00000567006 CAMK2BQ13554 666 aa12.55□□□□□ -0.4
ACSM3-210ENST00000567006 SLC4A5Q9BY07 1137 aa12.55□□□□□ -0.4
ACSM3-210ENST00000567006 ADAM33Q9BZ11 813 aa12.52□□□□□ -0.41
ACSM3-210ENST00000567006 PHF14O94880 888 aa12.49□□□□□ -0.41
ACSM3-210ENST00000567006 FBXW7Q969H0 707 aa12.49□□□□□ -0.41
ACSM3-210ENST00000567006 ZBED2Q9BTP6 218 aa12.49□□□□□ -0.41
ACSM3-210ENST00000567006 PCDHGA10Q9Y5H3 936 aa12.49□□□□□ -0.41
ACSM3-210ENST00000567006 KCTD12Q96CX2 325 aaKnown RBP12.48□□□□□ -0.41
ACSM3-210ENST00000567006 DPYSL4O14531 572 aa12.47□□□□□ -0.41
ACSM3-210ENST00000567006 TYW1BQ6NUM6 668 aa12.47□□□□□ -0.41
ACSM3-210ENST00000567006 PAXIP1Q6ZW49 1069 aaPredicted RBP12.47□□□□□ -0.41
ACSM3-210ENST00000567006 CFAP44Q96MT7 982 aa12.47□□□□□ -0.41
ACSM3-210ENST00000567006 EPAS1Q99814 870 aa12.44□□□□□ -0.42
ACSM3-210ENST00000567006 PPP1R3GB7ZBB8 358 aa12.43□□□□□ -0.42
ACSM3-210ENST00000567006 BHMG1C9JSJ3 638 aaPredicted RBP12.43□□□□□ -0.42
ACSM3-210ENST00000567006 GOLGA8CPA6NN73 597 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms