RNA–Protein interactions for RNA: ENST00000566561.1

KLHDC4-216, Transcript of kelch domain containing 4, humanhuman

TSL 4

Gene KLHDC4, Length 564 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KLHDC4-216ENST00000566561 ZFYVE16Q7Z3T8 1539 aa20.03■□□□□ 0.8
KLHDC4-216ENST00000566561 CLIP1P30622 1438 aa20.02■□□□□ 0.8
KLHDC4-216ENST00000566561 SIGLEC1Q9BZZ2 1709 aa19.99■□□□□ 0.79
KLHDC4-216ENST00000566561 CASKIN1Q8WXD9 1431 aa19.99■□□□□ 0.79
KLHDC4-216ENST00000566561 MAGI2Q86UL8 1455 aa19.98■□□□□ 0.79
KLHDC4-216ENST00000566561 TROQ12816 1431 aaPredicted RBP19.97■□□□□ 0.79
KLHDC4-216ENST00000566561 PLCH2O75038 1416 aa19.96■□□□□ 0.79
KLHDC4-216ENST00000566561 CCDC18Q5T9S5 1454 aa19.94■□□□□ 0.78
KLHDC4-216ENST00000566561 YEATS2Q9ULM3 1422 aa19.93■□□□□ 0.78
KLHDC4-216ENST00000566561 MYO5CQ9NQX4 1742 aa19.93■□□□□ 0.78
KLHDC4-216ENST00000566561 EFCAB2Q5VUJ9 269 aa19.93■□□□□ 0.78
KLHDC4-216ENST00000566561 PREX1Q8TCU6 1659 aa19.93■□□□□ 0.78
KLHDC4-216ENST00000566561 KIF14Q15058 1648 aa19.92■□□□□ 0.78
KLHDC4-216ENST00000566561 FYCO1Q9BQS8 1478 aa19.92■□□□□ 0.78
KLHDC4-216ENST00000566561 PLPPR3Q6T4P5 718 aa19.91■□□□□ 0.78
KLHDC4-216ENST00000566561 HSPA2P54652 639 aa19.9■□□□□ 0.78
KLHDC4-216ENST00000566561 SCAPERQ9BY12 1400 aa19.9■□□□□ 0.78
KLHDC4-216ENST00000566561 LRRIQ1Q96JM4 1722 aa19.89■□□□□ 0.77
KLHDC4-216ENST00000566561 ARHGEF12Q9NZN5 1544 aa19.86■□□□□ 0.77
KLHDC4-216ENST00000566561 ARHGAP5Q13017 1502 aa19.86■□□□□ 0.77
KLHDC4-216ENST00000566561 CEP162Q5TB80 1403 aa19.85■□□□□ 0.77
KLHDC4-216ENST00000566561 C9orf84Q5VXU9 1444 aa19.85■□□□□ 0.77
KLHDC4-216ENST00000566561 MLECQ14165 292 aa19.85■□□□□ 0.77
KLHDC4-216ENST00000566561 ATP10AO60312 1499 aa19.83■□□□□ 0.76
KLHDC4-216ENST00000566561 LOC105371045A0A1W2PR82 267 aa19.82■□□□□ 0.76
KLHDC4-216ENST00000566561 CERKQ8TCT0 537 aa19.81■□□□□ 0.76
KLHDC4-216ENST00000566561 SETD1BQ9UPS6 1966 aaKnown RBP19.81■□□□□ 0.76
KLHDC4-216ENST00000566561 ZNF518AQ6AHZ1 1483 aa19.79■□□□□ 0.76
KLHDC4-216ENST00000566561 MYT1LQ9UL68 1186 aa19.79■□□□□ 0.76
KLHDC4-216ENST00000566561 KDM5CP41229 1560 aa19.78■□□□□ 0.76
KLHDC4-216ENST00000566561 AFAP1Q8N556 730 aa19.77■□□□□ 0.76
KLHDC4-216ENST00000566561 MTUS2Q5JR59 1369 aa19.77■□□□□ 0.76
KLHDC4-216ENST00000566561 STRCQ7RTU9 1775 aa19.76■□□□□ 0.75
KLHDC4-216ENST00000566561 ZNF777Q9ULD5 760 aaPredicted RBP19.75■□□□□ 0.75
KLHDC4-216ENST00000566561 UHRF1BP1Q6BDS2 1440 aa19.74■□□□□ 0.75
KLHDC4-216ENST00000566561 REREQ9P2R6 1566 aa19.74■□□□□ 0.75
KLHDC4-216ENST00000566561 DIP2CQ9Y2E4 1556 aa19.74■□□□□ 0.75
KLHDC4-216ENST00000566561 PREX2Q70Z35 1606 aa19.73■□□□□ 0.75
KLHDC4-216ENST00000566561 CDC42BPBQ9Y5S2 1711 aa19.72■□□□□ 0.75
KLHDC4-216ENST00000566561 C3P01024 1663 aa19.71■□□□□ 0.75
KLHDC4-216ENST00000566561 ABCA6Q8N139 1617 aa19.71■□□□□ 0.75
KLHDC4-216ENST00000566561 CCNB3Q8WWL7 1395 aa19.7■□□□□ 0.74
KLHDC4-216ENST00000566561 DMRT2Q9Y5R5 561 aa19.7■□□□□ 0.74
KLHDC4-216ENST00000566561 GPATCH8Q9UKJ3 1502 aaKnown RBP19.7■□□□□ 0.74
KLHDC4-216ENST00000566561 CFDP1Q9UEE9 299 aaPredicted RBP19.69■□□□□ 0.74
KLHDC4-216ENST00000566561 TRAPPC8Q9Y2L5 1435 aa19.68■□□□□ 0.74
KLHDC4-216ENST00000566561 ITSN2Q9NZM3 1697 aa19.68■□□□□ 0.74
KLHDC4-216ENST00000566561 ABCC1P33527 1531 aa19.67■□□□□ 0.74
KLHDC4-216ENST00000566561 CDC42BPAQ5VT25 1732 aa19.66■□□□□ 0.74
KLHDC4-216ENST00000566561 CEBPAP49715 358 aaPredicted RBP19.66■□□□□ 0.74
KLHDC4-216ENST00000566561 EHBP1L1Q8N3D4 1523 aa19.65■□□□□ 0.74
KLHDC4-216ENST00000566561 HNRNPMP52272 730 aaKnown RBP eCLIP19.64■□□□□ 0.73
KLHDC4-216ENST00000566561 MLH3Q9UHC1 1453 aa19.64■□□□□ 0.73
KLHDC4-216ENST00000566561 AGLP35573 1532 aa19.63■□□□□ 0.73
KLHDC4-216ENST00000566561 VPS8Q8N3P4 1428 aa19.62■□□□□ 0.73
KLHDC4-216ENST00000566561 DISP3Q9P2K9 1392 aa19.62■□□□□ 0.73
KLHDC4-216ENST00000566561 SPATA31D1Q6ZQQ2 1576 aa19.61■□□□□ 0.73
KLHDC4-216ENST00000566561 SAMD9LQ8IVG5 1584 aa19.61■□□□□ 0.73
KLHDC4-216ENST00000566561 PTPRTO14522 1441 aa19.61■□□□□ 0.73
KLHDC4-216ENST00000566561 SYCP2Q9BX26 1530 aa19.61■□□□□ 0.73
KLHDC4-216ENST00000566561 ESF1Q9H501 851 aaKnown RBP19.6■□□□□ 0.73
KLHDC4-216ENST00000566561 PLEKHH2Q8IVE3 1493 aa19.6■□□□□ 0.73
KLHDC4-216ENST00000566561 KIDINS220Q9ULH0 1771 aa19.6■□□□□ 0.73
KLHDC4-216ENST00000566561 SPAG9O60271 1321 aaKnown RBP19.59■□□□□ 0.73
KLHDC4-216ENST00000566561 KIAA1107Q9UPP5 1409 aa19.59■□□□□ 0.73
KLHDC4-216ENST00000566561 MROH2AA6NES4 1674 aa19.59■□□□□ 0.73
KLHDC4-216ENST00000566561 CNTLNQ9NXG0 1405 aa19.58■□□□□ 0.72
KLHDC4-216ENST00000566561 ZNF644Q9H582 1327 aaPredicted RBP19.57■□□□□ 0.72
KLHDC4-216ENST00000566561 TIAM1Q13009 1591 aa19.57■□□□□ 0.72
KLHDC4-216ENST00000566561 IQSEC2Q5JU85 1478 aa19.55■□□□□ 0.72
KLHDC4-216ENST00000566561 NCOA2Q15596 1464 aa19.54■□□□□ 0.72
KLHDC4-216ENST00000566561 SUPT6HQ7KZ85 1726 aaKnown RBP19.54■□□□□ 0.72
KLHDC4-216ENST00000566561 NCOA1Q15788 1441 aa19.53■□□□□ 0.72
KLHDC4-216ENST00000566561 LTBP4Q8N2S1 1624 aa19.53■□□□□ 0.72
KLHDC4-216ENST00000566561 ZNF142P52746 1687 aaPredicted RBP19.5■□□□□ 0.71
KLHDC4-216ENST00000566561 LRRC9Q6ZRR7 1453 aa19.5■□□□□ 0.71
KLHDC4-216ENST00000566561 CAMSAP1Q5T5Y3 1602 aa19.5■□□□□ 0.71
KLHDC4-216ENST00000566561 NPATQ14207 1427 aa19.5■□□□□ 0.71
KLHDC4-216ENST00000566561 SOCS7O14512 581 aa19.49■□□□□ 0.71
KLHDC4-216ENST00000566561 APLP2Q06481 763 aa19.49■□□□□ 0.71
KLHDC4-216ENST00000566561 KANK4Q5T7N3 995 aaPredicted RBP19.49■□□□□ 0.71
KLHDC4-216ENST00000566561 ILDR2Q71H61 639 aa19.49■□□□□ 0.71
KLHDC4-216ENST00000566561 ATP7AQ04656 1500 aa19.49■□□□□ 0.71
KLHDC4-216ENST00000566561 MYO3AQ8NEV4 1616 aa19.47■□□□□ 0.71
KLHDC4-216ENST00000566561 CLTCQ00610 1675 aaKnown RBP19.47■□□□□ 0.71
KLHDC4-216ENST00000566561 MBD5Q9P267 1494 aa19.47■□□□□ 0.71
KLHDC4-216ENST00000566561 MAP3K1Q13233 1512 aa19.46■□□□□ 0.71
KLHDC4-216ENST00000566561 INO80Q9ULG1 1556 aaPredicted RBP19.44■□□□□ 0.7
KLHDC4-216ENST00000566561 A2MP01023 1474 aa19.44■□□□□ 0.7
KLHDC4-216ENST00000566561 CAMSAP2Q08AD1 1489 aa19.44■□□□□ 0.7
KLHDC4-216ENST00000566561 RSPH4AQ5TD94 716 aa19.43■□□□□ 0.7
KLHDC4-216ENST00000566561 PLXNC1O60486 1568 aa19.43■□□□□ 0.7
KLHDC4-216ENST00000566561 RTEL1-TNFRSF6BF6WH68 1400 aa19.42■□□□□ 0.7
KLHDC4-216ENST00000566561 CEP170BQ9Y4F5 1589 aaPredicted RBP19.41■□□□□ 0.7
KLHDC4-216ENST00000566561 CCDC141Q6ZP82 1450 aa19.41■□□□□ 0.7
KLHDC4-216ENST00000566561 ADGBQ8N7X0 1667 aa19.4■□□□□ 0.7
KLHDC4-216ENST00000566561 GGT6Q6P531 493 aa19.4■□□□□ 0.7
KLHDC4-216ENST00000566561 PLA2R1Q13018 1463 aa19.4■□□□□ 0.7
KLHDC4-216ENST00000566561 TSPY4P0CV99 314 aa19.39■□□□□ 0.69
KLHDC4-216ENST00000566561 TSPY10P0CW01 314 aa19.39■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms