RNA–Protein interactions for RNA: ENST00000566474.5

TMEM87A-209, Transcript of transmembrane protein 87A, humanhuman

TSL 4

Gene TMEM87A, Length 581 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM87A-209ENST00000566474 ZSWIM6Q9HCJ5 1215 aa12.08□□□□□ -0.48
TMEM87A-209ENST00000566474 GPR153Q6NV75 609 aa12.06□□□□□ -0.48
TMEM87A-209ENST00000566474 NLRP6P59044 892 aa12.01□□□□□ -0.49
TMEM87A-209ENST00000566474 ZNF687Q8N1G0 1237 aa12.01□□□□□ -0.49
TMEM87A-209ENST00000566474 BCL11BQ9C0K0 894 aaPredicted RBP12□□□□□ -0.49
TMEM87A-209ENST00000566474 FBXO22Q8NEZ5 403 aa11.99□□□□□ -0.49
TMEM87A-209ENST00000566474 ARSIQ5FYB1 569 aa11.98□□□□□ -0.49
TMEM87A-209ENST00000566474 RNF166Q96A37 237 aaPredicted RBP11.97□□□□□ -0.49
TMEM87A-209ENST00000566474 TAOK2Q9UL54 1235 aa11.97□□□□□ -0.49
TMEM87A-209ENST00000566474 STK24Q9Y6E0 443 aa11.97□□□□□ -0.49
TMEM87A-209ENST00000566474 MYT1LQ9UL68 1186 aa11.94□□□□□ -0.5
TMEM87A-209ENST00000566474 KHSRPQ92945 711 aaKnown RBP eCLIP11.93□□□□□ -0.51e-6■■■□□ 18
TMEM87A-209ENST00000566474 MFRPQ9BY79 579 aa11.93□□□□□ -0.5
TMEM87A-209ENST00000566474 ZNF316A6NFI3 1004 aaPredicted RBP11.9□□□□□ -0.5
TMEM87A-209ENST00000566474 STK25O00506 426 aa11.89□□□□□ -0.51
TMEM87A-209ENST00000566474 KIF3CO14782 793 aa11.88□□□□□ -0.51
TMEM87A-209ENST00000566474 C2orf72A6NCS6 295 aa11.87□□□□□ -0.51
TMEM87A-209ENST00000566474 ECM2O94769 699 aaPredicted RBP11.86□□□□□ -0.51
TMEM87A-209ENST00000566474 ANKRD13DQ6ZTN6 518 aa11.86□□□□□ -0.51
TMEM87A-209ENST00000566474 PTGER2P43116 358 aa11.84□□□□□ -0.51
TMEM87A-209ENST00000566474 NUDT7P0C024 238 aa11.81□□□□□ -0.52
TMEM87A-209ENST00000566474 LSM11P83369 360 aaKnown RBP eCLIP11.8□□□□□ -0.52
TMEM87A-209ENST00000566474 RGL2O15211 777 aa11.79□□□□□ -0.52
TMEM87A-209ENST00000566474 PKD2Q13563 968 aa11.78□□□□□ -0.52
TMEM87A-209ENST00000566474 SLC34A2O95436 690 aa11.77□□□□□ -0.53
TMEM87A-209ENST00000566474 PCDHGA4Q9Y5G9 962 aa11.77□□□□□ -0.53
TMEM87A-209ENST00000566474 TMC2Q8TDI7 906 aa11.76□□□□□ -0.53
TMEM87A-209ENST00000566474 LHX6Q9UPM6 363 aa11.76□□□□□ -0.53
TMEM87A-209ENST00000566474 PBX2P40425 430 aa11.74□□□□□ -0.53
TMEM87A-209ENST00000566474 POTEEQ6S8J3 1075 aa11.73□□□□□ -0.53
TMEM87A-209ENST00000566474 PPP1R37O75864 691 aa11.72□□□□□ -0.53
TMEM87A-209ENST00000566474 AXIN2Q9Y2T1 843 aa11.72□□□□□ -0.53
TMEM87A-209ENST00000566474 KDM4FA0A1W2PPD8 638 aa11.62□□□□□ -0.55
TMEM87A-209ENST00000566474 ARHGAP33O14559 1287 aa11.61□□□□□ -0.55
TMEM87A-209ENST00000566474 PTCD2Q8WV60 388 aaKnown RBP11.61□□□□□ -0.55
TMEM87A-209ENST00000566474 PSDA5PKW4 1024 aaPredicted RBP11.6□□□□□ -0.55
TMEM87A-209ENST00000566474 ADGRD1Q6QNK2 874 aa11.59□□□□□ -0.55
TMEM87A-209ENST00000566474 FOXK1P85037 733 aa11.58□□□□□ -0.56
TMEM87A-209ENST00000566474 PLPP6Q8IY26 295 aa11.58□□□□□ -0.56
TMEM87A-209ENST00000566474 HCSTQ9UBK5 93 aa11.56□□□□□ -0.56
TMEM87A-209ENST00000566474 GPHNQ9NQX3 736 aaPredicted RBP11.55□□□□□ -0.56
TMEM87A-209ENST00000566474 TK2O00142 265 aa11.53□□□□□ -0.56
TMEM87A-209ENST00000566474 PSEN2P49810 448 aa11.53□□□□□ -0.56
TMEM87A-209ENST00000566474 DMRTA1Q5VZB9 504 aa11.53□□□□□ -0.56
TMEM87A-209ENST00000566474 HS6ST3Q8IZP7 471 aa11.53□□□□□ -0.56
TMEM87A-209ENST00000566474 PLA2G2EQ9NZK7 142 aa11.53□□□□□ -0.56
TMEM87A-209ENST00000566474 DSG2Q14126 1118 aa11.52□□□□□ -0.57
TMEM87A-209ENST00000566474 HRO43593 1189 aa11.5□□□□□ -0.57
TMEM87A-209ENST00000566474 TBC1D12O60347 775 aa11.5□□□□□ -0.57
TMEM87A-209ENST00000566474 PPP4R3BQ5MIZ7 849 aa11.5□□□□□ -0.57
TMEM87A-209ENST00000566474 CHGAP10645 457 aaKnown RBP11.44□□□□□ -0.58
TMEM87A-209ENST00000566474 KCTD12Q96CX2 325 aaKnown RBP11.42□□□□□ -0.58
TMEM87A-209ENST00000566474 KCNK17Q96T54 332 aa11.42□□□□□ -0.58
TMEM87A-209ENST00000566474 OXER1Q8TDS5 423 aa11.41□□□□□ -0.58
TMEM87A-209ENST00000566474 STAC3Q96MF2 364 aa11.41□□□□□ -0.58
TMEM87A-209ENST00000566474 NKX1-1Q15270 411 aaPredicted RBP11.4□□□□□ -0.58
TMEM87A-209ENST00000566474 UPF1Q92900 1129 aaKnown RBP eCLIP11.4□□□□□ -0.58
TMEM87A-209ENST00000566474 KCNH8Q96L42 1107 aa11.39□□□□□ -0.59
TMEM87A-209ENST00000566474 DNAJC5Q9H3Z4 198 aa11.37□□□□□ -0.59
TMEM87A-209ENST00000566474 VPS9D1Q9Y2B5 631 aa11.37□□□□□ -0.59
TMEM87A-209ENST00000566474 ZNF454Q8N9F8 522 aa11.36□□□□□ -0.59
TMEM87A-209ENST00000566474 CRISPLD2Q9H0B8 497 aa11.36□□□□□ -0.59
TMEM87A-209ENST00000566474 PPP1R15BQ5SWA1 713 aa11.34□□□□□ -0.59
TMEM87A-209ENST00000566474 BCL2L12Q9HB09 334 aa11.33□□□□□ -0.6
TMEM87A-209ENST00000566474 RYDENQ9NUL5 291 aaKnown RBP11.33□□□□□ -0.6
TMEM87A-209ENST00000566474 PTPN5P54829 565 aa11.31□□□□□ -0.6
TMEM87A-209ENST00000566474 SLC4A5Q9BY07 1137 aa11.31□□□□□ -0.6
TMEM87A-209ENST00000566474 FOSBP53539 338 aa11.3□□□□□ -0.6
TMEM87A-209ENST00000566474 NCKAP5LQ9HCH0 1330 aa11.29□□□□□ -0.6
TMEM87A-209ENST00000566474 PDE4AP27815 886 aa11.28□□□□□ -0.6
TMEM87A-209ENST00000566474 ANO8Q9HCE9 1232 aaPredicted RBP11.28□□□□□ -0.6
TMEM87A-209ENST00000566474 BHMG1C9JSJ3 638 aaPredicted RBP11.27□□□□□ -0.61
TMEM87A-209ENST00000566474 PTPREP23469 700 aa11.27□□□□□ -0.61
TMEM87A-209ENST00000566474 ZBED2Q9BTP6 218 aa11.25□□□□□ -0.61
TMEM87A-209ENST00000566474 EVI5O60447 810 aa11.24□□□□□ -0.61
TMEM87A-209ENST00000566474 JPH4Q96JJ6 628 aa11.24□□□□□ -0.61
TMEM87A-209ENST00000566474 THSD4Q6ZMP0 1018 aa11.23□□□□□ -0.61
TMEM87A-209ENST00000566474 ZDHHC16Q969W1 377 aa11.22□□□□□ -0.61
TMEM87A-209ENST00000566474 ADAM33Q9BZ11 813 aa11.22□□□□□ -0.61
TMEM87A-209ENST00000566474 GOLGA8CPA6NN73 597 aa11.21□□□□□ -0.61
TMEM87A-209ENST00000566474 LARP6Q9BRS8 491 aaKnown RBP11.21□□□□□ -0.61
TMEM87A-209ENST00000566474 GTPBP6O43824 516 aaPredicted RBP11.2□□□□□ -0.62
TMEM87A-209ENST00000566474 MRPL50Q8N5N7 158 aaKnown RBP11.2□□□□□ -0.62
TMEM87A-209ENST00000566474 WNT2BQ93097 391 aa11.2□□□□□ -0.62
TMEM87A-209ENST00000566474 IFFO2Q5TF58 517 aa11.19□□□□□ -0.62
TMEM87A-209ENST00000566474 DDX27Q96GQ7 796 aaKnown RBP11.19□□□□□ -0.62
TMEM87A-209ENST00000566474 MAP3K9P80192 1104 aa11.17□□□□□ -0.62
TMEM87A-209ENST00000566474 MFSD10Q14728 455 aa11.15□□□□□ -0.62
TMEM87A-209ENST00000566474 NBPF3Q9H094 633 aa11.15□□□□□ -0.62
TMEM87A-209ENST00000566474 RGS20O76081 388 aa11.14□□□□□ -0.63
TMEM87A-209ENST00000566474 EMILIN3Q9NT22 766 aa11.13□□□□□ -0.63
TMEM87A-209ENST00000566474 PCDHGA10Q9Y5H3 936 aa11.12□□□□□ -0.63
TMEM87A-209ENST00000566474 A0A0G2JS52 829 aa11.11□□□□□ -0.63
TMEM87A-209ENST00000566474 PPP1R3GB7ZBB8 358 aa11.1□□□□□ -0.63
TMEM87A-209ENST00000566474 PROX2Q3B8N5 592 aa11.09□□□□□ -0.63
TMEM87A-209ENST00000566474 COL9A1P20849 921 aa11.08□□□□□ -0.64
TMEM87A-209ENST00000566474 RABGEF1Q9UJ41 708 aa11.08□□□□□ -0.64
TMEM87A-209ENST00000566474 TYW1BQ6NUM6 668 aa11.05□□□□□ -0.64
TMEM87A-209ENST00000566474 ANKK1Q8NFD2 765 aa11.05□□□□□ -0.64
TMEM87A-209ENST00000566474 IRX2Q9BZI1 471 aaPredicted RBP11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms