RNA–Protein interactions for RNA: ENST00000566219.1

EDC3-210, Transcript of enhancer of mRNA decapping 3, humanhuman

TSL 3

Gene EDC3, Length 688 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDC3-210ENST00000566219 SCAPERQ9BY12 1400 aa26.46■■□□□ 1.83
EDC3-210ENST00000566219 MYO5CQ9NQX4 1742 aa26.44■■□□□ 1.82
EDC3-210ENST00000566219 ARHGEF12Q9NZN5 1544 aa26.44■■□□□ 1.82
EDC3-210ENST00000566219 PREX1Q8TCU6 1659 aa26.44■■□□□ 1.82
EDC3-210ENST00000566219 PLCH2O75038 1416 aa26.42■■□□□ 1.82
EDC3-210ENST00000566219 CERKQ8TCT0 537 aa26.41■■□□□ 1.82
EDC3-210ENST00000566219 C9orf84Q5VXU9 1444 aa26.4■■□□□ 1.82
EDC3-210ENST00000566219 ATP10AO60312 1499 aa26.38■■□□□ 1.81
EDC3-210ENST00000566219 KIF14Q15058 1648 aa26.36■■□□□ 1.81
EDC3-210ENST00000566219 STRCQ7RTU9 1775 aa26.3■■□□□ 1.8
EDC3-210ENST00000566219 ZNF518AQ6AHZ1 1483 aa26.3■■□□□ 1.8
EDC3-210ENST00000566219 KDM5CP41229 1560 aa26.29■■□□□ 1.8
EDC3-210ENST00000566219 CEBPAP49715 358 aaPredicted RBP26.29■■□□□ 1.8
EDC3-210ENST00000566219 ATP1B4Q9UN42 357 aaPredicted RBP26.29■■□□□ 1.8
EDC3-210ENST00000566219 ARHGAP5Q13017 1502 aa26.29■■□□□ 1.8
EDC3-210ENST00000566219 EFCAB2Q5VUJ9 269 aa26.28■■□□□ 1.8
EDC3-210ENST00000566219 FMN1Q68DA7 1419 aa26.28■■□□□ 1.8
EDC3-210ENST00000566219 DIP2CQ9Y2E4 1556 aa26.26■■□□□ 1.79
EDC3-210ENST00000566219 UHRF1BP1Q6BDS2 1440 aa26.24■■□□□ 1.79
EDC3-210ENST00000566219 EHMT2Q96KQ7 1210 aa26.24■■□□□ 1.79
EDC3-210ENST00000566219 ARHGAP35Q9NRY4 1499 aa26.23■■□□□ 1.79
EDC3-210ENST00000566219 ABCA6Q8N139 1617 aa26.23■■□□□ 1.79
EDC3-210ENST00000566219 TROQ12816 1431 aaPredicted RBP26.22■■□□□ 1.79
EDC3-210ENST00000566219 LRRIQ1Q96JM4 1722 aa26.22■■□□□ 1.79
EDC3-210ENST00000566219 C3P01024 1663 aa26.2■■□□□ 1.78
EDC3-210ENST00000566219 REREQ9P2R6 1566 aa26.2■■□□□ 1.78
EDC3-210ENST00000566219 CDK11AQ9UQ88 783 aaPredicted RBP26.19■■□□□ 1.78
EDC3-210ENST00000566219 CLIP1P30622 1438 aa26.19■■□□□ 1.78
EDC3-210ENST00000566219 AFAP1Q8N556 730 aa26.18■■□□□ 1.78
EDC3-210ENST00000566219 MYT1LQ9UL68 1186 aa26.18■■□□□ 1.78
EDC3-210ENST00000566219 CDC42BPBQ9Y5S2 1711 aa26.18■■□□□ 1.78
EDC3-210ENST00000566219 SETD1BQ9UPS6 1966 aaKnown RBP26.16■■□□□ 1.78
EDC3-210ENST00000566219 UBTFP17480 764 aaKnown RBP26.16■■□□□ 1.78
EDC3-210ENST00000566219 DISP3Q9P2K9 1392 aa26.16■■□□□ 1.78
EDC3-210ENST00000566219 DMRT2Q9Y5R5 561 aa26.15■■□□□ 1.78
EDC3-210ENST00000566219 PREX2Q70Z35 1606 aa26.14■■□□□ 1.78
EDC3-210ENST00000566219 ABCC1P33527 1531 aa26.14■■□□□ 1.77
EDC3-210ENST00000566219 ITSN2Q9NZM3 1697 aa26.13■■□□□ 1.77
EDC3-210ENST00000566219 MLH3Q9UHC1 1453 aa26.11■■□□□ 1.77
EDC3-210ENST00000566219 AGLP35573 1532 aa26.09■■□□□ 1.77
EDC3-210ENST00000566219 ILDR2Q71H61 639 aa26.09■■□□□ 1.77
EDC3-210ENST00000566219 SPATA31D1Q6ZQQ2 1576 aa26.08■■□□□ 1.77
EDC3-210ENST00000566219 PTPRTO14522 1441 aa26.08■■□□□ 1.77
EDC3-210ENST00000566219 TRAPPC8Q9Y2L5 1435 aa26.08■■□□□ 1.77
EDC3-210ENST00000566219 KIDINS220Q9ULH0 1771 aa26.06■■□□□ 1.76
EDC3-210ENST00000566219 CDC42BPAQ5VT25 1732 aa26.03■■□□□ 1.76
EDC3-210ENST00000566219 ESF1Q9H501 851 aaKnown RBP26.03■■□□□ 1.76
EDC3-210ENST00000566219 LTBP4Q8N2S1 1624 aa26.03■■□□□ 1.76
EDC3-210ENST00000566219 CCDC18Q5T9S5 1454 aa26■■□□□ 1.75
EDC3-210ENST00000566219 NCOA1Q15788 1441 aa26■■□□□ 1.75
EDC3-210ENST00000566219 CNTLNQ9NXG0 1405 aa25.98■■□□□ 1.75
EDC3-210ENST00000566219 MROH2AA6NES4 1674 aa25.97■■□□□ 1.75
EDC3-210ENST00000566219 SOCS7O14512 581 aa25.97■■□□□ 1.75
EDC3-210ENST00000566219 SAMD9LQ8IVG5 1584 aa25.95■■□□□ 1.75
EDC3-210ENST00000566219 CASKIN1Q8WXD9 1431 aa25.95■■□□□ 1.74
EDC3-210ENST00000566219 CAMSAP1Q5T5Y3 1602 aa25.95■■□□□ 1.74
EDC3-210ENST00000566219 IQSEC2Q5JU85 1478 aa25.94■■□□□ 1.74
EDC3-210ENST00000566219 SYCP2Q9BX26 1530 aa25.93■■□□□ 1.74
EDC3-210ENST00000566219 SUPT6HQ7KZ85 1726 aaKnown RBP25.92■■□□□ 1.74
EDC3-210ENST00000566219 NPATQ14207 1427 aa25.9■■□□□ 1.74
EDC3-210ENST00000566219 CLTCQ00610 1675 aaKnown RBP25.89■■□□□ 1.73
EDC3-210ENST00000566219 MYO3AQ8NEV4 1616 aa25.88■■□□□ 1.73
EDC3-210ENST00000566219 ZNF142P52746 1687 aaPredicted RBP25.87■■□□□ 1.73
EDC3-210ENST00000566219 ZNF777Q9ULD5 760 aaPredicted RBP25.86■■□□□ 1.73
EDC3-210ENST00000566219 FYCO1Q9BQS8 1478 aa25.85■■□□□ 1.73
EDC3-210ENST00000566219 ATP7AQ04656 1500 aa25.85■■□□□ 1.73
EDC3-210ENST00000566219 INO80Q9ULG1 1556 aaPredicted RBP25.84■■□□□ 1.73
EDC3-210ENST00000566219 PLXNC1O60486 1568 aa25.83■■□□□ 1.73
EDC3-210ENST00000566219 ZMYM3Q14202 1370 aa25.82■■□□□ 1.72
EDC3-210ENST00000566219 SPAG9O60271 1321 aaKnown RBP25.82■■□□□ 1.72
EDC3-210ENST00000566219 NCKAP5LQ9HCH0 1330 aa25.81■■□□□ 1.72
EDC3-210ENST00000566219 CEP170BQ9Y4F5 1589 aaPredicted RBP25.81■■□□□ 1.72
EDC3-210ENST00000566219 GPATCH8Q9UKJ3 1502 aaKnown RBP25.8■■□□□ 1.72
EDC3-210ENST00000566219 CHIC1Q5VXU3 224 aa25.8■■□□□ 1.72
EDC3-210ENST00000566219 ZNF335Q9H4Z2 1342 aaPredicted RBP25.8■■□□□ 1.72
EDC3-210ENST00000566219 PLA2R1Q13018 1463 aa25.78■■□□□ 1.72
EDC3-210ENST00000566219 HNRNPMP52272 730 aaKnown RBP eCLIP25.77■■□□□ 1.72
EDC3-210ENST00000566219 A2MP01023 1474 aa25.77■■□□□ 1.72
EDC3-210ENST00000566219 PTPRKQ15262 1439 aa25.74■■□□□ 1.71
EDC3-210ENST00000566219 TCOF1Q13428 1488 aaKnown RBP25.73■■□□□ 1.71
EDC3-210ENST00000566219 PLEKHH2Q8IVE3 1493 aa25.73■■□□□ 1.71
EDC3-210ENST00000566219 UBAP1LF5GYI3 381 aa25.73■■□□□ 1.71
EDC3-210ENST00000566219 ADGBQ8N7X0 1667 aa25.72■■□□□ 1.71
EDC3-210ENST00000566219 KIAA1107Q9UPP5 1409 aa25.71■■□□□ 1.71
EDC3-210ENST00000566219 PKD2Q13563 968 aa25.69■■□□□ 1.7
EDC3-210ENST00000566219 GGT6Q6P531 493 aa25.68■■□□□ 1.7
EDC3-210ENST00000566219 CFDP1Q9UEE9 299 aaPredicted RBP25.68■■□□□ 1.7
EDC3-210ENST00000566219 CCNB3Q8WWL7 1395 aa25.68■■□□□ 1.7
EDC3-210ENST00000566219 DNMT1P26358 1616 aaKnown RBP25.64■■□□□ 1.7
EDC3-210ENST00000566219 POLR1AO95602 1720 aaPredicted RBP25.63■■□□□ 1.69
EDC3-210ENST00000566219 PPP6R1Q9UPN7 881 aa25.63■■□□□ 1.69
EDC3-210ENST00000566219 A2ML1A8K2U0 1454 aa25.63■■□□□ 1.69
EDC3-210ENST00000566219 TIAM1Q13009 1591 aa25.63■■□□□ 1.69
EDC3-210ENST00000566219 MTUS2Q5JR59 1369 aa25.61■■□□□ 1.69
EDC3-210ENST00000566219 NEURL4Q96JN8 1562 aa25.58■■□□□ 1.69
EDC3-210ENST00000566219 EHBP1L1Q8N3D4 1523 aa25.56■■□□□ 1.68
EDC3-210ENST00000566219 ZNF644Q9H582 1327 aaPredicted RBP25.56■■□□□ 1.68
EDC3-210ENST00000566219 MED1Q15648 1581 aaPredicted RBP25.56■■□□□ 1.68
EDC3-210ENST00000566219 MBD5Q9P267 1494 aa25.55■■□□□ 1.68
EDC3-210ENST00000566219 SCAF1Q9H7N4 1312 aaKnown RBP25.55■■□□□ 1.68
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms