RNA–Protein interactions for RNA: ENST00000566062.1

SUB1P4-201, Transcript of SUB1 homolog, transcriptional regulator pseudogene 4, humanhuman

BASIC

Gene SUB1P4, Length 339 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUB1P4-201ENST00000566062 NEUROD2Q15784 382 aa3.61□□□□□ -1.83
SUB1P4-201ENST00000566062 E2F4Q16254 413 aa3.61□□□□□ -1.83
SUB1P4-201ENST00000566062 ILDR1Q86SU0 546 aaPredicted RBP3.61□□□□□ -1.83
SUB1P4-201ENST00000566062 LARP6Q9BRS8 491 aaKnown RBP3.61□□□□□ -1.83
SUB1P4-201ENST00000566062 TMEM106CQ9BVX2 250 aa3.61□□□□□ -1.83
SUB1P4-201ENST00000566062 SEMA3EO15041 775 aa3.6□□□□□ -1.83
SUB1P4-201ENST00000566062 ATN1P54259 1190 aaPredicted RBP3.6□□□□□ -1.83
SUB1P4-201ENST00000566062 ERICH6Q7L0X2 663 aa3.6□□□□□ -1.83
SUB1P4-201ENST00000566062 ZC3H15Q8WU90 426 aaKnown RBP3.6□□□□□ -1.83
SUB1P4-201ENST00000566062 ARHGEF1Q92888 912 aaKnown RBP3.6□□□□□ -1.83
SUB1P4-201ENST00000566062 KRTAP17-1Q9BYP8 105 aa3.6□□□□□ -1.83
SUB1P4-201ENST00000566062 SLC24A3Q9HC58 644 aa3.6□□□□□ -1.83
SUB1P4-201ENST00000566062 TRIM35Q9UPQ4 493 aa3.6□□□□□ -1.83
SUB1P4-201ENST00000566062 SOX12O15370 315 aa3.59□□□□□ -1.83
SUB1P4-201ENST00000566062 PDE4AP27815 886 aa3.59□□□□□ -1.83
SUB1P4-201ENST00000566062 BRPF1P55201 1214 aaPredicted RBP3.59□□□□□ -1.83
SUB1P4-201ENST00000566062 GOLGA2Q08379 1002 aa3.59□□□□□ -1.83
SUB1P4-201ENST00000566062 KRTAP1-3Q8IUG1 177 aa3.59□□□□□ -1.83
SUB1P4-201ENST00000566062 MKRN3Q13064 507 aaKnown RBP3.58□□□□□ -1.84
SUB1P4-201ENST00000566062 OCEL1Q9H607 264 aa3.58□□□□□ -1.84
SUB1P4-201ENST00000566062 METRNQ9UJH8 293 aa3.58□□□□□ -1.84
SUB1P4-201ENST00000566062 TRPC6Q9Y210 931 aa3.58□□□□□ -1.84
SUB1P4-201ENST00000566062 SUPT5HO00267 1087 aaKnown RBP3.57□□□□□ -1.84
SUB1P4-201ENST00000566062 IRX5P78411 483 aaPredicted RBP3.57□□□□□ -1.84
SUB1P4-201ENST00000566062 SMYD5Q6GMV2 418 aa3.57□□□□□ -1.84
SUB1P4-201ENST00000566062 PELP1Q8IZL8 1130 aaKnown RBP3.57□□□□□ -1.84
SUB1P4-201ENST00000566062 KRI1Q8N9T8 703 aaKnown RBP3.57□□□□□ -1.84
SUB1P4-201ENST00000566062 FBXO22Q8NEZ5 403 aa3.57□□□□□ -1.84
SUB1P4-201ENST00000566062 SCUBE2Q9NQ36 999 aa3.57□□□□□ -1.84
SUB1P4-201ENST00000566062 TESPA1A2RU30 521 aaPredicted RBP3.56□□□□□ -1.84
SUB1P4-201ENST00000566062 PLCG2P16885 1265 aa3.56□□□□□ -1.84
SUB1P4-201ENST00000566062 NCKAP5LQ9HCH0 1330 aa3.55□□□□□ -1.84
SUB1P4-201ENST00000566062 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.55□□□□□ -1.84
SUB1P4-201ENST00000566062 ST18O60284 1047 aa3.55□□□□□ -1.84
SUB1P4-201ENST00000566062 SEC24BO95487 1268 aa3.55□□□□□ -1.84
SUB1P4-201ENST00000566062 DDX27Q96GQ7 796 aaKnown RBP3.55□□□□□ -1.84
SUB1P4-201ENST00000566062 L3MBTL3Q96JM7 780 aaPredicted RBP3.55□□□□□ -1.84
SUB1P4-201ENST00000566062 ARXQ96QS3 562 aa3.54□□□□□ -1.84
SUB1P4-201ENST00000566062 POTEFA5A3E0 1075 aa3.53□□□□□ -1.84
SUB1P4-201ENST00000566062 XP32Q5T750 250 aa3.53□□□□□ -1.84
SUB1P4-201ENST00000566062 RBM26Q5T8P6 1007 aaKnown RBP3.53□□□□□ -1.84
SUB1P4-201ENST00000566062 PDCD7Q8N8D1 485 aaKnown RBP3.53□□□□□ -1.84
SUB1P4-201ENST00000566062 IL27Q8NEV9 243 aa3.53□□□□□ -1.84
SUB1P4-201ENST00000566062 MS4A4AQ96JQ5 239 aa3.53□□□□□ -1.84
SUB1P4-201ENST00000566062 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP3.53□□□□□ -1.84
SUB1P4-201ENST00000566062 ZMYND10O75800 440 aa3.52□□□□□ -1.85
SUB1P4-201ENST00000566062 MLLT3P42568 568 aaPredicted RBP3.52□□□□□ -1.85
SUB1P4-201ENST00000566062 SUZ12Q15022 739 aaKnown RBP3.52□□□□□ -1.85
SUB1P4-201ENST00000566062 TMEM121BQ9BXQ6 578 aaPredicted RBP3.52□□□□□ -1.85
SUB1P4-201ENST00000566062 KRTAP4-8Q9BYQ9 185 aa3.52□□□□□ -1.85
SUB1P4-201ENST00000566062 GPBP1L1Q9HC44 474 aaPredicted RBP3.52□□□□□ -1.85
SUB1P4-201ENST00000566062 COLQQ9Y215 455 aaPredicted RBP3.52□□□□□ -1.85
SUB1P4-201ENST00000566062 MFSD10Q14728 455 aa3.51□□□□□ -1.85
SUB1P4-201ENST00000566062 BARGINQ6ZT62 677 aa3.51□□□□□ -1.85
SUB1P4-201ENST00000566062 GPIHBP1Q8IV16 184 aa3.51□□□□□ -1.85
SUB1P4-201ENST00000566062 HOMEZQ8IX15 550 aa3.51□□□□□ -1.85
SUB1P4-201ENST00000566062 RNF166Q96A37 237 aaPredicted RBP3.51□□□□□ -1.85
SUB1P4-201ENST00000566062 AK7Q96M32 723 aa3.51□□□□□ -1.85
SUB1P4-201ENST00000566062 CRISPLD2Q9H0B8 497 aa3.51□□□□□ -1.85
SUB1P4-201ENST00000566062 KRTAP9-6A0A140TA67 174 aa3.5□□□□□ -1.85
SUB1P4-201ENST00000566062 G3V3G9 751 aa3.5□□□□□ -1.85
SUB1P4-201ENST00000566062 DPYSL4O14531 572 aa3.5□□□□□ -1.85
SUB1P4-201ENST00000566062 PPP1R15BQ5SWA1 713 aa3.5□□□□□ -1.85
SUB1P4-201ENST00000566062 IRX2Q9BZI1 471 aaPredicted RBP3.5□□□□□ -1.85
SUB1P4-201ENST00000566062 BOLA1Q9Y3E2 137 aa3.5□□□□□ -1.85
SUB1P4-201ENST00000566062 DPY19L2Q6NUT2 758 aa3.49□□□□□ -1.85
SUB1P4-201ENST00000566062 KRTAP9-2Q9BYQ4 174 aa3.49□□□□□ -1.85
SUB1P4-201ENST00000566062 EIF2AK3Q9NZJ5 1116 aaKnown RBP3.49□□□□□ -1.85
SUB1P4-201ENST00000566062 NUTM2FA1L443 756 aa3.48□□□□□ -1.85
SUB1P4-201ENST00000566062 GRXCR2A6NFK2 248 aa3.48□□□□□ -1.85
SUB1P4-201ENST00000566062 CAMK2BQ13554 666 aa3.48□□□□□ -1.85
SUB1P4-201ENST00000566062 TRIM66O15016 1216 aa3.47□□□□□ -1.85
SUB1P4-201ENST00000566062 SNPHO15079 494 aa3.47□□□□□ -1.85
SUB1P4-201ENST00000566062 MAP3K9P80192 1104 aa3.47□□□□□ -1.85
SUB1P4-201ENST00000566062 PDE4DQ08499 809 aa3.47□□□□□ -1.85
SUB1P4-201ENST00000566062 DSG2Q14126 1118 aa3.47□□□□□ -1.85
SUB1P4-201ENST00000566062 C3orf67Q6ZVT6 689 aa3.47□□□□□ -1.85
SUB1P4-201ENST00000566062 MICALL2Q8IY33 904 aa3.47□□□□□ -1.85
SUB1P4-201ENST00000566062 TMC2Q8TDI7 906 aa3.47□□□□□ -1.85
SUB1P4-201ENST00000566062 KDM4CQ9H3R0 1056 aa3.47□□□□□ -1.85
SUB1P4-201ENST00000566062 GPHNQ9NQX3 736 aaPredicted RBP3.47□□□□□ -1.85
SUB1P4-201ENST00000566062 EMILIN3Q9NT22 766 aa3.47□□□□□ -1.85
SUB1P4-201ENST00000566062 ARIH1Q9Y4X5 557 aaPredicted RBP3.47□□□□□ -1.85
SUB1P4-201ENST00000566062 UPF1Q92900 1129 aaKnown RBP eCLIP3.46□□□□□ -1.86
SUB1P4-201ENST00000566062 KRTAP9-8Q9BYQ0 159 aa3.46□□□□□ -1.86
SUB1P4-201ENST00000566062 SPDYE16A6NNV3 312 aaPredicted RBP3.45□□□□□ -1.86
SUB1P4-201ENST00000566062 PLPP6Q8IY26 295 aa3.45□□□□□ -1.86
SUB1P4-201ENST00000566062 ARID3AQ99856 593 aa3.45□□□□□ -1.86
SUB1P4-201ENST00000566062 DAXXQ9UER7 740 aaPredicted RBP3.45□□□□□ -1.86
SUB1P4-201ENST00000566062 ZNF316A6NFI3 1004 aaPredicted RBP3.44□□□□□ -1.86
SUB1P4-201ENST00000566062 KRTAP3-3Q9BYR6 98 aa3.44□□□□□ -1.86
SUB1P4-201ENST00000566062 KRTAP3-2Q9BYR7 98 aa3.44□□□□□ -1.86
SUB1P4-201ENST00000566062 FAM117AQ9C073 453 aa3.44□□□□□ -1.86
SUB1P4-201ENST00000566062 ZMYND15Q9H091 742 aa3.44□□□□□ -1.86
SUB1P4-201ENST00000566062 ZSWIM6Q9HCJ5 1215 aa3.44□□□□□ -1.86
SUB1P4-201ENST00000566062 ATP1B4Q9UN42 357 aaPredicted RBP3.44□□□□□ -1.86
SUB1P4-201ENST00000566062 KIF3CO14782 793 aa3.43□□□□□ -1.86
SUB1P4-201ENST00000566062 SLAIN1Q8ND83 568 aa3.43□□□□□ -1.86
SUB1P4-201ENST00000566062 DDX12PQ92771 950 aa3.43□□□□□ -1.86
SUB1P4-201ENST00000566062 C2orf72A6NCS6 295 aa3.42□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms