RNA–Protein interactions for RNA: ENST00000565119.1

CHD9-214, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 3

Gene CHD9, Length 824 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-214ENST00000565119 PHF8Q9UPP1 1060 aa15.21■□□□□ 0.03
CHD9-214ENST00000565119 RIOK3O14730 519 aaKnown RBP15.19■□□□□ 0.02
CHD9-214ENST00000565119 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP15.18■□□□□ 0.02
CHD9-214ENST00000565119 ZFP91Q96JP5 570 aaPredicted RBP15.18■□□□□ 0.02
CHD9-214ENST00000565119 ARSIQ5FYB1 569 aa15.15■□□□□ 0.02
CHD9-214ENST00000565119 VGFO15240 615 aaPredicted RBP15.11■□□□□ 0.01
CHD9-214ENST00000565119 KHSRPQ92945 711 aaKnown RBP eCLIP15.1■□□□□ 0.012e-6■■■■□ 20.6
CHD9-214ENST00000565119 ANKRD13DQ6ZTN6 518 aa15.07■□□□□ 0
CHD9-214ENST00000565119 ZNF316A6NFI3 1004 aaPredicted RBP15.06■□□□□ 0
CHD9-214ENST00000565119 PTGER2P43116 358 aa15.06■□□□□ 0
CHD9-214ENST00000565119 FBXO22Q8NEZ5 403 aa15.02■□□□□ -0
CHD9-214ENST00000565119 NLRP6P59044 892 aa15.01□□□□□ -0.01
CHD9-214ENST00000565119 LSM11P83369 360 aaKnown RBP eCLIP14.99□□□□□ -0.01
CHD9-214ENST00000565119 BCL11BQ9C0K0 894 aaPredicted RBP14.95□□□□□ -0.02
CHD9-214ENST00000565119 KIF3CO14782 793 aa14.94□□□□□ -0.02
CHD9-214ENST00000565119 MFRPQ9BY79 579 aa14.92□□□□□ -0.02
CHD9-214ENST00000565119 C2orf72A6NCS6 295 aa14.91□□□□□ -0.02
CHD9-214ENST00000565119 NUDT7P0C024 238 aa14.91□□□□□ -0.02
CHD9-214ENST00000565119 POTEEQ6S8J3 1075 aa14.89□□□□□ -0.03
CHD9-214ENST00000565119 STK24Q9Y6E0 443 aa14.88□□□□□ -0.03
CHD9-214ENST00000565119 PBX2P40425 430 aa14.86□□□□□ -0.03
CHD9-214ENST00000565119 LHX6Q9UPM6 363 aa14.86□□□□□ -0.03
CHD9-214ENST00000565119 AXIN2Q9Y2T1 843 aa14.86□□□□□ -0.03
CHD9-214ENST00000565119 PCDHGA4Q9Y5G9 962 aa14.83□□□□□ -0.04
CHD9-214ENST00000565119 TAOK2Q9UL54 1235 aa14.81□□□□□ -0.04
CHD9-214ENST00000565119 SLC34A2O95436 690 aa14.8□□□□□ -0.04
CHD9-214ENST00000565119 STK25O00506 426 aa14.78□□□□□ -0.04
CHD9-214ENST00000565119 PLA2G2EQ9NZK7 142 aa14.75□□□□□ -0.05
CHD9-214ENST00000565119 TMC2Q8TDI7 906 aa14.72□□□□□ -0.05
CHD9-214ENST00000565119 HCSTQ9UBK5 93 aa14.71□□□□□ -0.05
CHD9-214ENST00000565119 ADGRD1Q6QNK2 874 aa14.7□□□□□ -0.06
CHD9-214ENST00000565119 ARHGAP33O14559 1287 aa14.68□□□□□ -0.06
CHD9-214ENST00000565119 KDM4FA0A1W2PPD8 638 aa14.66□□□□□ -0.06
CHD9-214ENST00000565119 PPP1R37O75864 691 aa14.64□□□□□ -0.07
CHD9-214ENST00000565119 ECM2O94769 699 aaPredicted RBP14.64□□□□□ -0.07
CHD9-214ENST00000565119 PSDA5PKW4 1024 aaPredicted RBP14.61□□□□□ -0.07
CHD9-214ENST00000565119 DMRTA1Q5VZB9 504 aa14.61□□□□□ -0.07
CHD9-214ENST00000565119 RGL2O15211 777 aa14.59□□□□□ -0.07
CHD9-214ENST00000565119 HRO43593 1189 aa14.59□□□□□ -0.07
CHD9-214ENST00000565119 PSEN2P49810 448 aa14.59□□□□□ -0.07
CHD9-214ENST00000565119 TK2O00142 265 aa14.58□□□□□ -0.08
CHD9-214ENST00000565119 PTCD2Q8WV60 388 aaKnown RBP14.58□□□□□ -0.08
CHD9-214ENST00000565119 PKD2Q13563 968 aa14.53□□□□□ -0.08
CHD9-214ENST00000565119 PLPP6Q8IY26 295 aa14.5□□□□□ -0.09
CHD9-214ENST00000565119 KCTD12Q96CX2 325 aaKnown RBP14.5□□□□□ -0.09
CHD9-214ENST00000565119 FOXK1P85037 733 aa14.49□□□□□ -0.09
CHD9-214ENST00000565119 PPP4R3BQ5MIZ7 849 aa14.47□□□□□ -0.09
CHD9-214ENST00000565119 GPHNQ9NQX3 736 aaPredicted RBP14.44□□□□□ -0.1
CHD9-214ENST00000565119 DSG2Q14126 1118 aa14.43□□□□□ -0.1
CHD9-214ENST00000565119 KCNK17Q96T54 332 aa14.42□□□□□ -0.1
CHD9-214ENST00000565119 STAC3Q96MF2 364 aa14.4□□□□□ -0.1
CHD9-214ENST00000565119 TBC1D12O60347 775 aa14.38□□□□□ -0.11
CHD9-214ENST00000565119 VPS9D1Q9Y2B5 631 aa14.37□□□□□ -0.11
CHD9-214ENST00000565119 PTPN5P54829 565 aa14.34□□□□□ -0.11
CHD9-214ENST00000565119 KCNH8Q96L42 1107 aa14.32□□□□□ -0.12
CHD9-214ENST00000565119 OXER1Q8TDS5 423 aa14.31□□□□□ -0.12
CHD9-214ENST00000565119 ZNF454Q8N9F8 522 aa14.27□□□□□ -0.13
CHD9-214ENST00000565119 HS6ST3Q8IZP7 471 aa14.26□□□□□ -0.13
CHD9-214ENST00000565119 UPF1Q92900 1129 aaKnown RBP eCLIP14.26□□□□□ -0.13
CHD9-214ENST00000565119 SLC4A5Q9BY07 1137 aa14.26□□□□□ -0.13
CHD9-214ENST00000565119 BCL2L12Q9HB09 334 aa14.25□□□□□ -0.13
CHD9-214ENST00000565119 BHMG1C9JSJ3 638 aaPredicted RBP14.24□□□□□ -0.13
CHD9-214ENST00000565119 IFFO2Q5TF58 517 aa14.24□□□□□ -0.13
CHD9-214ENST00000565119 THSD4Q6ZMP0 1018 aa14.23□□□□□ -0.13
CHD9-214ENST00000565119 RGS20O76081 388 aa14.21□□□□□ -0.13
CHD9-214ENST00000565119 FOSBP53539 338 aa14.2□□□□□ -0.14
CHD9-214ENST00000565119 ZBED2Q9BTP6 218 aa14.18□□□□□ -0.14
CHD9-214ENST00000565119 CRISPLD2Q9H0B8 497 aa14.17□□□□□ -0.14
CHD9-214ENST00000565119 A0A0G2JS52 829 aa14.16□□□□□ -0.14
CHD9-214ENST00000565119 PTPREP23469 700 aa14.16□□□□□ -0.14
CHD9-214ENST00000565119 WNT2BQ93097 391 aa14.15□□□□□ -0.14
CHD9-214ENST00000565119 IRX2Q9BZI1 471 aaPredicted RBP14.15□□□□□ -0.14
CHD9-214ENST00000565119 PPP1R15BQ5SWA1 713 aa14.14□□□□□ -0.15
CHD9-214ENST00000565119 GOLGA8CPA6NN73 597 aa14.13□□□□□ -0.15
CHD9-214ENST00000565119 NKX1-1Q15270 411 aaPredicted RBP14.13□□□□□ -0.15
CHD9-214ENST00000565119 MRPL50Q8N5N7 158 aaKnown RBP14.13□□□□□ -0.15
CHD9-214ENST00000565119 ANO8Q9HCE9 1232 aaPredicted RBP14.12□□□□□ -0.15
CHD9-214ENST00000565119 CHGAP10645 457 aaKnown RBP14.11□□□□□ -0.15
CHD9-214ENST00000565119 JPH4Q96JJ6 628 aa14.1□□□□□ -0.15
CHD9-214ENST00000565119 ADAM33Q9BZ11 813 aa14.1□□□□□ -0.15
CHD9-214ENST00000565119 ZDHHC16Q969W1 377 aa14.07□□□□□ -0.16
CHD9-214ENST00000565119 NCKAP5LQ9HCH0 1330 aa14.07□□□□□ -0.16
CHD9-214ENST00000565119 EVI5O60447 810 aa14.06□□□□□ -0.16
CHD9-214ENST00000565119 NBPF3Q9H094 633 aa14.05□□□□□ -0.16
CHD9-214ENST00000565119 DNAJC5Q9H3Z4 198 aa14.05□□□□□ -0.16
CHD9-214ENST00000565119 PDE4AP27815 886 aa14□□□□□ -0.17
CHD9-214ENST00000565119 RYDENQ9NUL5 291 aaKnown RBP13.98□□□□□ -0.17
CHD9-214ENST00000565119 ITGBL1O95965 494 aaPredicted RBP13.96□□□□□ -0.17
CHD9-214ENST00000565119 PROX2Q3B8N5 592 aa13.96□□□□□ -0.17
CHD9-214ENST00000565119 PPP1R3GB7ZBB8 358 aa13.94□□□□□ -0.18
CHD9-214ENST00000565119 ANKK1Q8NFD2 765 aa13.94□□□□□ -0.18
CHD9-214ENST00000565119 RABGEF1Q9UJ41 708 aa13.94□□□□□ -0.18
CHD9-214ENST00000565119 COL9A1P20849 921 aa13.93□□□□□ -0.18
CHD9-214ENST00000565119 PCDHGA10Q9Y5H3 936 aa13.93□□□□□ -0.18
CHD9-214ENST00000565119 LARP6Q9BRS8 491 aaKnown RBP13.92□□□□□ -0.18
CHD9-214ENST00000565119 BCAMP50895 628 aa13.91□□□□□ -0.18
CHD9-214ENST00000565119 MAP3K9P80192 1104 aa13.91□□□□□ -0.18
CHD9-214ENST00000565119 DDX27Q96GQ7 796 aaKnown RBP13.9□□□□□ -0.18
CHD9-214ENST00000565119 EMILIN3Q9NT22 766 aa13.89□□□□□ -0.19
CHD9-214ENST00000565119 SOWAHBA6NEL2 793 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms