RNA–Protein interactions for RNA: ENST00000564834.1

LINC01003-201, Transcript of long intergenic non-protein coding RNA 1003, humanhuman

BASIC

Gene LINC01003, Length 1,764 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01003-201ENST00000564834 ZNF644Q9H582 1327 aaPredicted RBP37.15■■■■□ 3.54
LINC01003-201ENST00000564834 MAPKBP1O60336 1514 aa37.14■■■■□ 3.54
LINC01003-201ENST00000564834 ABCC5O15440 1437 aa37.14■■■■□ 3.54
LINC01003-201ENST00000564834 ROCK1Q13464 1354 aa37.1■■■■□ 3.53
LINC01003-201ENST00000564834 PREX2Q70Z35 1606 aa37.09■■■■□ 3.53
LINC01003-201ENST00000564834 CHIC2Q9UKJ5 165 aa37.08■■■■□ 3.53
LINC01003-201ENST00000564834 CROCC2H7BZ55 1655 aa37.07■■■■□ 3.53
LINC01003-201ENST00000564834 CDC42BPBQ9Y5S2 1711 aa37.05■■■■□ 3.52
LINC01003-201ENST00000564834 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP37.03■■■■□ 3.523e-7■■■■■ 54.6
LINC01003-201ENST00000564834 TTC37Q6PGP7 1564 aa37.03■■■■□ 3.52
LINC01003-201ENST00000564834 RRP7BPQ9NSQ0 103 aa37.03■■■■□ 3.52
LINC01003-201ENST00000564834 ADGBQ8N7X0 1667 aa37.02■■■■□ 3.52
LINC01003-201ENST00000564834 ZNF777Q9ULD5 760 aaPredicted RBP37.01■■■■□ 3.51
LINC01003-201ENST00000564834 MYO5CQ9NQX4 1742 aa36.97■■■■□ 3.51
LINC01003-201ENST00000564834 ADGRL2O95490 1459 aa36.93■■■■□ 3.5
LINC01003-201ENST00000564834 KDM6BO15054 1643 aa36.93■■■■□ 3.5
LINC01003-201ENST00000564834 SHANK2Q9UPX8 1470 aa36.91■■■■□ 3.5
LINC01003-201ENST00000564834 ARHGEF5Q12774 1597 aa36.91■■■■□ 3.5
LINC01003-201ENST00000564834 SAMD9LQ8IVG5 1584 aa36.91■■■■□ 3.5
LINC01003-201ENST00000564834 ACIN1Q9UKV3 1341 aaKnown RBP36.88■■■■□ 3.49
LINC01003-201ENST00000564834 ARHGAP5Q13017 1502 aa36.86■■■■□ 3.49
LINC01003-201ENST00000564834 NCOA1Q15788 1441 aa36.86■■■■□ 3.49
LINC01003-201ENST00000564834 KCNH8Q96L42 1107 aa36.83■■■■□ 3.49
LINC01003-201ENST00000564834 MBD5Q9P267 1494 aa36.83■■■■□ 3.49
LINC01003-201ENST00000564834 WDR7Q9Y4E6 1490 aa36.83■■■■□ 3.49
LINC01003-201ENST00000564834 ANKRD30AQ9BXX3 1397 aa36.79■■■■□ 3.48
LINC01003-201ENST00000564834 C9orf84Q5VXU9 1444 aa36.79■■■■□ 3.48
LINC01003-201ENST00000564834 PLCH2O75038 1416 aa36.78■■■■□ 3.48
LINC01003-201ENST00000564834 CCDC141Q6ZP82 1450 aa36.77■■■■□ 3.48
LINC01003-201ENST00000564834 PLEKHH2Q8IVE3 1493 aa36.76■■■■□ 3.47
LINC01003-201ENST00000564834 RSPH4AQ5TD94 716 aa36.75■■■■□ 3.47
LINC01003-201ENST00000564834 SYCP2Q9BX26 1530 aa36.74■■■■□ 3.47
LINC01003-201ENST00000564834 ARAP3Q8WWN8 1544 aa36.72■■■■□ 3.47
LINC01003-201ENST00000564834 HNRNPMP52272 730 aaKnown RBP eCLIP36.72■■■■□ 3.47
LINC01003-201ENST00000564834 KIAA1107Q9UPP5 1409 aa36.72■■■■□ 3.47
LINC01003-201ENST00000564834 TSPY4P0CV99 314 aa36.71■■■■□ 3.47
LINC01003-201ENST00000564834 TSPY10P0CW01 314 aa36.71■■■■□ 3.47
LINC01003-201ENST00000564834 TRIM52Q96A61 297 aa36.7■■■■□ 3.47
LINC01003-201ENST00000564834 ASXL2Q76L83 1435 aa36.68■■■■□ 3.46
LINC01003-201ENST00000564834 SIN3AQ96ST3 1273 aa36.68■■■■□ 3.46
LINC01003-201ENST00000564834 ABCA9Q8IUA7 1624 aa36.67■■■■□ 3.46
LINC01003-201ENST00000564834 TIMELESSQ9UNS1 1208 aa36.67■■■■□ 3.46
LINC01003-201ENST00000564834 DENND4BO75064 1496 aaPredicted RBP36.66■■■■□ 3.46
LINC01003-201ENST00000564834 MAST1Q9Y2H9 1570 aa36.66■■■■□ 3.46
LINC01003-201ENST00000564834 ZNF316A6NFI3 1004 aaPredicted RBP36.63■■■■□ 3.46
LINC01003-201ENST00000564834 ANKRD50Q9ULJ7 1429 aa36.62■■■■□ 3.45
LINC01003-201ENST00000564834 EFCAB2Q5VUJ9 269 aa36.62■■■■□ 3.45
LINC01003-201ENST00000564834 NPM1P06748 294 aaKnown RBP eCLIP36.61■■■■□ 3.45
LINC01003-201ENST00000564834 NEUROD1Q13562 356 aa36.61■■■■□ 3.45
LINC01003-201ENST00000564834 ABCC1P33527 1531 aa36.6■■■■□ 3.45
LINC01003-201ENST00000564834 MPHOSPH9Q99550 1183 aa36.6■■■■□ 3.45
LINC01003-201ENST00000564834 KIF15Q9NS87 1388 aa36.56■■■■□ 3.44
LINC01003-201ENST00000564834 ARHGEF12Q9NZN5 1544 aa36.56■■■■□ 3.44
LINC01003-201ENST00000564834 PLXNC1O60486 1568 aa36.52■■■■□ 3.44
LINC01003-201ENST00000564834 PZPP20742 1482 aa36.49■■■■□ 3.43
LINC01003-201ENST00000564834 TONSLQ96HA7 1378 aa36.45■■■■□ 3.43
LINC01003-201ENST00000564834 RIMBP3CA6NJZ7 1639 aa36.45■■■■□ 3.43
LINC01003-201ENST00000564834 RIMBP3BA6NNM3 1639 aa36.45■■■■□ 3.43
LINC01003-201ENST00000564834 RIMBP3Q9UFD9 1639 aa36.45■■■■□ 3.43
LINC01003-201ENST00000564834 FANCAO15360 1455 aa36.45■■■■□ 3.43
LINC01003-201ENST00000564834 SLC4A1APQ9BWU0 796 aaKnown RBP36.44■■■■□ 3.42
LINC01003-201ENST00000564834 KDM5DQ9BY66 1539 aa36.44■■■■□ 3.42
LINC01003-201ENST00000564834 TRAPPC8Q9Y2L5 1435 aa36.4■■■■□ 3.42
LINC01003-201ENST00000564834 ANKRD30BQ9BXX2 1392 aa36.38■■■■□ 3.41
LINC01003-201ENST00000564834 PPP1R15AO75807 674 aaPredicted RBP36.35■■■■□ 3.41
LINC01003-201ENST00000564834 DIEXFQ68CQ4 756 aaKnown RBP36.35■■■■□ 3.41
LINC01003-201ENST00000564834 DUOX2Q9NRD8 1548 aa36.34■■■■□ 3.41
LINC01003-201ENST00000564834 FOXD1Q16676 465 aa36.32■■■■□ 3.4
LINC01003-201ENST00000564834 NUP155O75694 1391 aa36.31■■■■□ 3.4
LINC01003-201ENST00000564834 RTEL1-TNFRSF6BF6WH68 1400 aa36.31■■■■□ 3.4
LINC01003-201ENST00000564834 ADGRL1O94910 1474 aa36.3■■■■□ 3.4
LINC01003-201ENST00000564834 CFAP74Q9C0B2 1584 aa36.3■■■■□ 3.4
LINC01003-201ENST00000564834 UNC13BO14795 1591 aa36.29■■■■□ 3.4
LINC01003-201ENST00000564834 ZFYVE16Q7Z3T8 1539 aa36.29■■■■□ 3.4
LINC01003-201ENST00000564834 CYB5RLQ6IPT4 315 aa36.27■■■■□ 3.4
LINC01003-201ENST00000564834 RPRD2Q5VT52 1461 aaKnown RBP36.27■■■■□ 3.4
LINC01003-201ENST00000564834 ERBINQ96RT1 1412 aa36.27■■■■□ 3.4
LINC01003-201ENST00000564834 CD109Q6YHK3 1445 aa36.25■■■■□ 3.39
LINC01003-201ENST00000564834 SPAG9O60271 1321 aaKnown RBP36.24■■■■□ 3.39
LINC01003-201ENST00000564834 INO80Q9ULG1 1556 aaPredicted RBP36.23■■■■□ 3.39
LINC01003-201ENST00000564834 SCAPERQ9BY12 1400 aa36.23■■■■□ 3.39
LINC01003-201ENST00000564834 PKD2Q13563 968 aa36.22■■■■□ 3.39
LINC01003-201ENST00000564834 AFAP1Q8N556 730 aa36.21■■■■□ 3.39
LINC01003-201ENST00000564834 FAM135AQ9P2D6 1515 aa36.2■■■■□ 3.38
LINC01003-201ENST00000564834 ATP7AQ04656 1500 aa36.18■■■■□ 3.38
LINC01003-201ENST00000564834 MAGI2Q86UL8 1455 aa36.16■■■■□ 3.38
LINC01003-201ENST00000564834 IQGAP3Q86VI3 1631 aa36.15■■■■□ 3.38
LINC01003-201ENST00000564834 ZNF518AQ6AHZ1 1483 aa36.11■■■■□ 3.37
LINC01003-201ENST00000564834 TEX14Q8IWB6 1497 aa36.11■■■■□ 3.37
LINC01003-201ENST00000564834 MAP3K4Q9Y6R4 1608 aa36.09■■■■□ 3.37
LINC01003-201ENST00000564834 GLI2P10070 1586 aa36.09■■■■□ 3.37
LINC01003-201ENST00000564834 NEO1Q92859 1461 aa36.07■■■■□ 3.36
LINC01003-201ENST00000564834 L3MBTL2Q969R5 705 aa36.05■■■■□ 3.36
LINC01003-201ENST00000564834 KDM5CP41229 1560 aa36.04■■■■□ 3.36
LINC01003-201ENST00000564834 KIDINS220Q9ULH0 1771 aa36.04■■■■□ 3.36
LINC01003-201ENST00000564834 POGZQ7Z3K3 1410 aa36.03■■■■□ 3.36
LINC01003-201ENST00000564834 DEPDC5O75140 1603 aa36.01■■■■□ 3.35
LINC01003-201ENST00000564834 EIF2AK4Q9P2K8 1649 aaKnown RBP36■■■■□ 3.35
LINC01003-201ENST00000564834 GRWD1Q9BQ67 446 aaKnown RBP eCLIP35.97■■■■□ 3.35
LINC01003-201ENST00000564834 DNAJC5Q9H3Z4 198 aa35.96■■■■□ 3.35
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms